RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 PSMD11O00231 422 aa15.32■□□□□ 0.04
CNOT9-205ENST00000433439 RAD51BO15315 384 aa15.32■□□□□ 0.04
CNOT9-205ENST00000433439 LDB2O43679 373 aa15.32■□□□□ 0.04
CNOT9-205ENST00000433439 LILRB5O75023 590 aa15.32■□□□□ 0.04
CNOT9-205ENST00000433439 MLNP12872 115 aa15.32■□□□□ 0.04
CNOT9-205ENST00000433439 GM2AP17900 193 aa15.32■□□□□ 0.04
CNOT9-205ENST00000433439 ADRA1DP25100 572 aa15.32■□□□□ 0.04
CNOT9-205ENST00000433439 SPINT3P49223 89 aa15.32■□□□□ 0.04
CNOT9-205ENST00000433439 DHX9Q08211 1270 aaKnown RBP15.32■□□□□ 0.04
CNOT9-205ENST00000433439 HIF1AQ16665 826 aa15.32■□□□□ 0.04
CNOT9-205ENST00000433439 DNAJC21Q5F1R6 531 aaKnown RBP15.32■□□□□ 0.04
CNOT9-205ENST00000433439 PCID2Q5JVF3 399 aa15.32■□□□□ 0.04
CNOT9-205ENST00000433439 LYSMD4Q5XG99 296 aa15.32■□□□□ 0.04
CNOT9-205ENST00000433439 CES3Q6UWW8 571 aa15.32■□□□□ 0.04
CNOT9-205ENST00000433439 CCDC25Q86WR0 208 aa15.32■□□□□ 0.04
CNOT9-205ENST00000433439 IFT20Q8IY31 132 aa15.32■□□□□ 0.04
CNOT9-205ENST00000433439 PDIK1LQ8N165 341 aa15.32■□□□□ 0.04
CNOT9-205ENST00000433439 OR4K2Q8NGD2 314 aa15.32■□□□□ 0.04
CNOT9-205ENST00000433439 OR13C4Q8NGS5 318 aa15.32■□□□□ 0.04
CNOT9-205ENST00000433439 FBXO25Q8TCJ0 367 aa15.32■□□□□ 0.04
CNOT9-205ENST00000433439 UBXN4Q92575 508 aa15.32■□□□□ 0.04
CNOT9-205ENST00000433439 ART4Q93070 314 aa15.32■□□□□ 0.04
CNOT9-205ENST00000433439 SCAMP4Q969E2 229 aa15.32■□□□□ 0.04
CNOT9-205ENST00000433439 DTD2Q96FN9 168 aa15.32■□□□□ 0.04
CNOT9-205ENST00000433439 SERAC1Q96JX3 654 aa15.32■□□□□ 0.04
CNOT9-205ENST00000433439 DNAJC1Q96KC8 554 aaKnown RBP15.32■□□□□ 0.04
CNOT9-205ENST00000433439 COQ10AQ96MF6 247 aa15.32■□□□□ 0.04
CNOT9-205ENST00000433439 C1QTNF7Q9BXJ2 289 aa15.32■□□□□ 0.04
CNOT9-205ENST00000433439 C1QTNF2Q9BXJ5 285 aa15.32■□□□□ 0.04
CNOT9-205ENST00000433439 IL22Q9GZX6 179 aa15.32■□□□□ 0.04
CNOT9-205ENST00000433439 PCED1AQ9H1Q7 454 aa15.32■□□□□ 0.04
CNOT9-205ENST00000433439 EBF2Q9HAK2 575 aa15.32■□□□□ 0.04
CNOT9-205ENST00000433439 RAB23Q9ULC3 237 aa15.32■□□□□ 0.04
CNOT9-205ENST00000433439 TCAF1Q9Y4C2 921 aa15.32■□□□□ 0.04
CNOT9-205ENST00000433439 A0A1W2PPC4 97 aa15.31■□□□□ 0.04
CNOT9-205ENST00000433439 TP73O15350 636 aa15.31■□□□□ 0.04
CNOT9-205ENST00000433439 LATO43561 262 aa15.31■□□□□ 0.04
CNOT9-205ENST00000433439 BPIP17213 487 aa15.31■□□□□ 0.04
CNOT9-205ENST00000433439 HNRNPA2B1P22626 353 aaKnown RBP15.31■□□□□ 0.04
CNOT9-205ENST00000433439 ITPKAP23677 461 aa15.31■□□□□ 0.04
CNOT9-205ENST00000433439 AKT2P31751 481 aa15.31■□□□□ 0.04
CNOT9-205ENST00000433439 HMGCLP35914 325 aa15.31■□□□□ 0.04
CNOT9-205ENST00000433439 CARSP49589 748 aaKnown RBP15.31■□□□□ 0.04
CNOT9-205ENST00000433439 DRG2P55039 364 aaKnown RBP15.31■□□□□ 0.04
CNOT9-205ENST00000433439 CLDN2P57739 230 aa15.31■□□□□ 0.04
CNOT9-205ENST00000433439 PDE1BQ01064 536 aa15.31■□□□□ 0.04
CNOT9-205ENST00000433439 CAV1Q03135 178 aa15.31■□□□□ 0.04
CNOT9-205ENST00000433439 PDIA2Q13087 525 aaKnown RBP15.31■□□□□ 0.04
CNOT9-205ENST00000433439 LRRC14Q15048 493 aa15.31■□□□□ 0.04
CNOT9-205ENST00000433439 IRF4Q15306 451 aa15.31■□□□□ 0.04
CNOT9-205ENST00000433439 SMAD1Q15797 465 aaKnown RBP15.31■□□□□ 0.04
CNOT9-205ENST00000433439 MSS51Q4VC12 460 aa15.31■□□□□ 0.04
CNOT9-205ENST00000433439 WDR45BQ5MNZ6 344 aa15.31■□□□□ 0.04
CNOT9-205ENST00000433439 ZDHHC24Q6UX98 284 aa15.31■□□□□ 0.04
CNOT9-205ENST00000433439 KDM7AQ6ZMT4 941 aa15.31■□□□□ 0.04
CNOT9-205ENST00000433439 MICALCLQ6ZW33 695 aa15.31■□□□□ 0.04
CNOT9-205ENST00000433439 TECPR1Q7Z6L1 1165 aa15.31■□□□□ 0.04
CNOT9-205ENST00000433439 GPR26Q8NDV2 337 aa15.31■□□□□ 0.04
CNOT9-205ENST00000433439 AP2M1Q96CW1 435 aa15.31■□□□□ 0.04
CNOT9-205ENST00000433439 ZNF778Q96MU6 729 aa15.31■□□□□ 0.04
CNOT9-205ENST00000433439 SLC6A18Q96N87 628 aa15.31■□□□□ 0.04
CNOT9-205ENST00000433439 RIOK2Q9BVS4 552 aaKnown RBP15.31■□□□□ 0.04
CNOT9-205ENST00000433439 FRMD8Q9BZ67 464 aaPredicted RBP15.31■□□□□ 0.04
CNOT9-205ENST00000433439 ABCG8Q9H221 673 aa15.31■□□□□ 0.04
CNOT9-205ENST00000433439 FAM83DQ9H4H8 585 aa15.31■□□□□ 0.04
CNOT9-205ENST00000433439 MBNL1Q9NR56 388 aaKnown RBP15.31■□□□□ 0.04
CNOT9-205ENST00000433439 CHRAC1Q9NRG0 131 aa15.31■□□□□ 0.04
CNOT9-205ENST00000433439 AASDHPPTQ9NRN7 309 aa15.31■□□□□ 0.04
CNOT9-205ENST00000433439 IL17CQ9P0M4 197 aa15.31■□□□□ 0.04
CNOT9-205ENST00000433439 SLC2A6Q9UGQ3 507 aa15.31■□□□□ 0.04
CNOT9-205ENST00000433439 FKBPLQ9UIM3 349 aa15.31■□□□□ 0.04
CNOT9-205ENST00000433439 CHMP2BQ9UQN3 213 aa15.31■□□□□ 0.04
CNOT9-205ENST00000433439 CD27P26842 260 aa15.3■□□□□ 0.04
CNOT9-205ENST00000433439 NMBRP28336 390 aa15.3■□□□□ 0.04
CNOT9-205ENST00000433439 SPAM1P38567 509 aa15.3■□□□□ 0.04
CNOT9-205ENST00000433439 MAGEA3P43357 314 aa15.3■□□□□ 0.04
CNOT9-205ENST00000433439 ZNF140P52738 457 aaPredicted RBP15.3■□□□□ 0.04
CNOT9-205ENST00000433439 PTPN5P54829 565 aa15.3■□□□□ 0.04
CNOT9-205ENST00000433439 CREB5Q02930 508 aa15.3■□□□□ 0.04
CNOT9-205ENST00000433439 LAMB3Q13751 1172 aa15.3■□□□□ 0.04
CNOT9-205ENST00000433439 STAT4Q14765 748 aa15.3■□□□□ 0.04
CNOT9-205ENST00000433439 WSCD2Q2TBF2 565 aa15.3■□□□□ 0.04
CNOT9-205ENST00000433439 TSTD2Q5T7W7 516 aa15.3■□□□□ 0.04
CNOT9-205ENST00000433439 RAET1GQ6H3X3 334 aa15.3■□□□□ 0.04
CNOT9-205ENST00000433439 FAM151BQ6UXP7 276 aa15.3■□□□□ 0.04
CNOT9-205ENST00000433439 CENPUQ71F23 418 aa15.3■□□□□ 0.04
CNOT9-205ENST00000433439 CYP2U1Q7Z449 544 aa15.3■□□□□ 0.04
CNOT9-205ENST00000433439 ANKMY2Q8IV38 441 aa15.3■□□□□ 0.04
CNOT9-205ENST00000433439 AGGF1Q8N302 714 aaeCLIP15.3■□□□□ 0.04
CNOT9-205ENST00000433439 CBARPQ8N350 705 aaPredicted RBP15.3■□□□□ 0.04
CNOT9-205ENST00000433439 ZCCHC9Q8N567 271 aaKnown RBP15.3■□□□□ 0.04
CNOT9-205ENST00000433439 TP53I13Q8NBR0 393 aaPredicted RBP15.3■□□□□ 0.04
CNOT9-205ENST00000433439 PLA2G15Q8NCC3 412 aa15.3■□□□□ 0.04
CNOT9-205ENST00000433439 STYXQ8WUJ0 223 aa15.3■□□□□ 0.04
CNOT9-205ENST00000433439 SEC14L1Q92503 715 aa15.3■□□□□ 0.04
CNOT9-205ENST00000433439 PIGKQ92643 395 aa15.3■□□□□ 0.04
CNOT9-205ENST00000433439 ZNF669Q96BR6 464 aaPredicted RBP15.3■□□□□ 0.04
CNOT9-205ENST00000433439 STAMBPL1Q96FJ0 436 aa15.3■□□□□ 0.04
CNOT9-205ENST00000433439 CFAP36Q96G28 342 aa15.3■□□□□ 0.04
CNOT9-205ENST00000433439 RANBP9Q96S59 729 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms