RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 ZNF334Q9HCZ1 680 aaPredicted RBP13.95□□□□□ -0.18
HOXC4-202ENST00000430889 ANGPTL2Q9UKU9 493 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 PPM1HQ9ULR3 514 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 PRPF19Q9UMS4 504 aaKnown RBP13.95□□□□□ -0.18
HOXC4-202ENST00000430889 POMPQ9Y244 141 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 FZD6O60353 706 aa13.94□□□□□ -0.18
HOXC4-202ENST00000430889 TSPAN3O60637 253 aa13.94□□□□□ -0.18
HOXC4-202ENST00000430889 TMCC1O94876 653 aa13.94□□□□□ -0.18
HOXC4-202ENST00000430889 CCL5P13501 91 aa13.94□□□□□ -0.18
HOXC4-202ENST00000430889 CD9P21926 228 aa13.94□□□□□ -0.18
HOXC4-202ENST00000430889 PLK1P53350 603 aa13.94□□□□□ -0.18
HOXC4-202ENST00000430889 SESN3P58005 492 aa13.94□□□□□ -0.18
HOXC4-202ENST00000430889 ZXDBP98169 803 aa13.94□□□□□ -0.18
HOXC4-202ENST00000430889 TWF1Q12792 350 aa13.94□□□□□ -0.18
HOXC4-202ENST00000430889 TRAF2Q12933 501 aa13.94□□□□□ -0.18
HOXC4-202ENST00000430889 PTK2BQ14289 1009 aa13.94□□□□□ -0.18
HOXC4-202ENST00000430889 UGT3A2Q3SY77 523 aa13.94□□□□□ -0.18
HOXC4-202ENST00000430889 RNF111Q6ZNA4 994 aa13.94□□□□□ -0.18
HOXC4-202ENST00000430889 C16orf59Q7L2K0 433 aa13.94□□□□□ -0.18
HOXC4-202ENST00000430889 GLT6D1Q7Z4J2 308 aa13.94□□□□□ -0.18
HOXC4-202ENST00000430889 DNAJB7Q7Z6W7 309 aaPredicted RBP13.94□□□□□ -0.18
HOXC4-202ENST00000430889 KBTBD2Q8IY47 623 aa13.94□□□□□ -0.18
HOXC4-202ENST00000430889 OR4K2Q8NGD2 314 aa13.94□□□□□ -0.18
HOXC4-202ENST00000430889 CEP70Q8NHQ1 597 aa13.94□□□□□ -0.18
HOXC4-202ENST00000430889 GIMAP7Q8NHV1 300 aa13.94□□□□□ -0.18
HOXC4-202ENST00000430889 JADE3Q92613 823 aa13.94□□□□□ -0.18
HOXC4-202ENST00000430889 FAM136AQ96C01 138 aa13.94□□□□□ -0.18
HOXC4-202ENST00000430889 PHF21BQ96EK2 531 aa13.94□□□□□ -0.18
HOXC4-202ENST00000430889 ZNF558Q96NG5 402 aa13.94□□□□□ -0.18
HOXC4-202ENST00000430889 SLC22A12Q96S37 553 aa13.94□□□□□ -0.18
HOXC4-202ENST00000430889 TFB2MQ9H5Q4 396 aaKnown RBP13.94□□□□□ -0.18
HOXC4-202ENST00000430889 EML4Q9HC35 981 aaKnown RBP13.94□□□□□ -0.18
HOXC4-202ENST00000430889 S100A14Q9HCY8 104 aa13.94□□□□□ -0.18
HOXC4-202ENST00000430889 GTSE1Q9NYZ3 720 aa13.94□□□□□ -0.18
HOXC4-202ENST00000430889 RAI2Q9Y5P3 530 aa13.94□□□□□ -0.18
HOXC4-202ENST00000430889 HELZP42694 1942 aaKnown RBP13.93□□□□□ -0.18
HOXC4-202ENST00000430889 H7C0S8 307 aa13.93□□□□□ -0.18
HOXC4-202ENST00000430889 CBX4O00257 560 aa13.93□□□□□ -0.18
HOXC4-202ENST00000430889 SNAP91O60641 907 aa13.93□□□□□ -0.18
HOXC4-202ENST00000430889 C1RP00736 705 aa13.93□□□□□ -0.18
HOXC4-202ENST00000430889 SLC4A1P02730 911 aa13.93□□□□□ -0.18
HOXC4-202ENST00000430889 IRF1P10914 325 aa13.93□□□□□ -0.18
HOXC4-202ENST00000430889 MZF1P28698 734 aaPredicted RBP13.93□□□□□ -0.18
HOXC4-202ENST00000430889 AP2B1P63010 937 aa13.93□□□□□ -0.18
HOXC4-202ENST00000430889 HERVK_113P63132 956 aa13.93□□□□□ -0.18
HOXC4-202ENST00000430889 CYLC2Q14093 348 aaPredicted RBP13.93□□□□□ -0.18
HOXC4-202ENST00000430889 INO80DQ53TQ3 878 aaPredicted RBP13.93□□□□□ -0.18
HOXC4-202ENST00000430889 SDCCAG8Q86SQ7 713 aaPredicted RBP13.93□□□□□ -0.18
HOXC4-202ENST00000430889 DDX53Q86TM3 631 aaKnown RBP13.93□□□□□ -0.18
HOXC4-202ENST00000430889 HERC6Q8IVU3 1022 aa13.93□□□□□ -0.18
HOXC4-202ENST00000430889 DSELQ8IZU8 1212 aa13.93□□□□□ -0.18
HOXC4-202ENST00000430889 KIRREL3Q8IZU9 778 aa13.93□□□□□ -0.18
HOXC4-202ENST00000430889 BIRC8Q96P09 236 aa13.93□□□□□ -0.18
HOXC4-202ENST00000430889 LBHD1Q9BQE6 289 aaPredicted RBP13.93□□□□□ -0.18
HOXC4-202ENST00000430889 ERVK-6Q9BXR3 956 aa13.93□□□□□ -0.18
HOXC4-202ENST00000430889 DERL2Q9GZP9 239 aa13.93□□□□□ -0.18
HOXC4-202ENST00000430889 CRISPLD2Q9H0B8 497 aa13.93□□□□□ -0.18
HOXC4-202ENST00000430889 MAFFQ9ULX9 164 aa13.93□□□□□ -0.18
HOXC4-202ENST00000430889 INSL5Q9Y5Q6 135 aa13.93□□□□□ -0.18
HOXC4-202ENST00000430889 OAS3Q9Y6K5 1087 aaKnown RBP13.93□□□□□ -0.18
HOXC4-202ENST00000430889 CCDC189A1A4V9 331 aa13.92□□□□□ -0.18
HOXC4-202ENST00000430889 ANKRD66B4E2M5 251 aa13.92□□□□□ -0.18
HOXC4-202ENST00000430889 LILRB3O75022 631 aa13.92□□□□□ -0.18
HOXC4-202ENST00000430889 LPOP22079 712 aaPredicted RBP13.92□□□□□ -0.18
HOXC4-202ENST00000430889 EPHB1P54762 984 aa13.92□□□□□ -0.18
HOXC4-202ENST00000430889 VEPH1Q14D04 833 aa13.92□□□□□ -0.18
HOXC4-202ENST00000430889 C16orf89Q6UX73 402 aa13.92□□□□□ -0.18
HOXC4-202ENST00000430889 HPS6Q86YV9 775 aa13.92□□□□□ -0.18
HOXC4-202ENST00000430889 GPR65Q8IYL9 337 aa13.92□□□□□ -0.18
HOXC4-202ENST00000430889 PGAM4Q8N0Y7 254 aa13.92□□□□□ -0.18
HOXC4-202ENST00000430889 KYQ8NBH2 561 aa13.92□□□□□ -0.18
HOXC4-202ENST00000430889 LPCAT1Q8NF37 534 aa13.92□□□□□ -0.18
HOXC4-202ENST00000430889 KIAA1191Q96A73 305 aa13.92□□□□□ -0.18
HOXC4-202ENST00000430889 MARK4Q96L34 752 aa13.92□□□□□ -0.18
HOXC4-202ENST00000430889 IKZF3Q9UKT9 509 aa13.92□□□□□ -0.18
HOXC4-202ENST00000430889 TRAF6Q9Y4K3 522 aa13.92□□□□□ -0.18
HOXC4-202ENST00000430889 PCDHGC4Q9Y5F7 938 aa13.92□□□□□ -0.18
HOXC4-202ENST00000430889 LCHNA4D1U4 455 aa13.91□□□□□ -0.18
HOXC4-202ENST00000430889 LIN7AO14910 233 aaPredicted RBP13.91□□□□□ -0.18
HOXC4-202ENST00000430889 LUC7L3O95232 432 aaKnown RBP13.91□□□□□ -0.18
HOXC4-202ENST00000430889 FGF4P08620 206 aa13.91□□□□□ -0.18
HOXC4-202ENST00000430889 MBL2P11226 248 aaPredicted RBP13.91□□□□□ -0.18
HOXC4-202ENST00000430889 ARSAP15289 507 aa13.91□□□□□ -0.18
HOXC4-202ENST00000430889 RFC2P35250 354 aa13.91□□□□□ -0.18
HOXC4-202ENST00000430889 DPP6P42658 865 aa13.91□□□□□ -0.18
HOXC4-202ENST00000430889 CDKN1CP49918 316 aaPredicted RBP13.91□□□□□ -0.18
HOXC4-202ENST00000430889 NUDT2P50583 147 aa13.91□□□□□ -0.18
HOXC4-202ENST00000430889 SMAD3P84022 425 aaKnown RBP13.91□□□□□ -0.18
HOXC4-202ENST00000430889 PIGGQ5H8A4 983 aa13.91□□□□□ -0.18
HOXC4-202ENST00000430889 NXNQ6DKJ4 435 aa13.91□□□□□ -0.18
HOXC4-202ENST00000430889 LARP4Q71RC2 724 aaKnown RBP eCLIP13.91□□□□□ -0.18
HOXC4-202ENST00000430889 KBTBD6Q86V97 674 aa13.91□□□□□ -0.18
HOXC4-202ENST00000430889 PIANPQ8IYJ0 282 aa13.91□□□□□ -0.18
HOXC4-202ENST00000430889 CMTR2Q8IYT2 770 aaKnown RBP13.91□□□□□ -0.18
HOXC4-202ENST00000430889 AFAP1L2Q8N4X5 818 aa13.91□□□□□ -0.18
HOXC4-202ENST00000430889 HJURPQ8NCD3 748 aaPredicted RBP13.91□□□□□ -0.18
HOXC4-202ENST00000430889 WFDC5Q8TCV5 224 aa13.91□□□□□ -0.18
HOXC4-202ENST00000430889 RCN3Q96D15 328 aa13.91□□□□□ -0.18
HOXC4-202ENST00000430889 RMDN1Q96DB5 314 aa13.91□□□□□ -0.18
HOXC4-202ENST00000430889 TMEM169Q96HH4 297 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms