RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 FKBP1AP62942 108 aaKnown RBP15.39■□□□□ 0.05
PTPRF-206ENST00000429895 PEX6Q13608 980 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 ITGA7Q13683 1181 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 CBFBQ13951 182 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 LIPMQ5VYY2 423 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 RCN3Q96D15 328 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 GPER1Q99527 375 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 ZNF184Q99676 751 aaPredicted RBP15.39■□□□□ 0.05
PTPRF-206ENST00000429895 NT5EP21589 574 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 WNT3AP56704 352 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 FMO1Q01740 532 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 BROXQ5VW32 411 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 LINGO4Q6UY18 593 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 ALYREFQ86V81 257 aaKnown RBP15.39■□□□□ 0.05
PTPRF-206ENST00000429895 DEPDC4Q8N2C3 294 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 SMG7Q92540 1137 aaKnown RBP15.39■□□□□ 0.05
PTPRF-206ENST00000429895 B3GNT5Q9BYG0 378 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 KCNN2Q9H2S1 579 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 CNOT6Q9ULM6 557 aaKnown RBP15.39■□□□□ 0.05
PTPRF-206ENST00000429895 E9PCH4 1651 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 CCDC182A6NF36 153 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 MASP1P48740 699 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 FBXO42Q6P3S6 717 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 ZBTB46Q86UZ6 589 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 FNIP1Q8TF40 1166 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 PIH1D2Q8WWB5 315 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 MEIS2O14770 477 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 PRODHO43272 600 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 SUV39H1O43463 412 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 KELP23276 732 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 DLG2Q15700 870 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 CADM2Q8N3J6 435 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 PTCH2Q9Y6C5 1203 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 hCG_1818297A0A087WSY0 165 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 TRIM38O00635 465 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 GRM5P41594 1212 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 PERM1Q5SV97 790 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 CCNYL2Q5T2Q4 361 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 C7orf61Q8IZ16 206 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 PTCD3Q96EY7 689 aaKnown RBP15.38■□□□□ 0.05
PTPRF-206ENST00000429895 ZNF490Q9ULM2 529 aaPredicted RBP15.38■□□□□ 0.05
PTPRF-206ENST00000429895 C2CD2Q9Y426 696 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 RPTORQ8N122 1335 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 A0A0U1RQJ8 604 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 ITGAVP06756 1048 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 ADSSP30520 456 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 TAS2R40P59535 323 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 RFWD3Q6PCD5 774 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 OTOP3Q7RTS5 596 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 METTL21AQ8WXB1 218 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 HAS1Q92839 578 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 FEM1CQ96JP0 617 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 FCRL4Q96PJ5 515 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 DEC1Q9P2X7 70 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 MRTO4Q9UKD2 239 aaKnown RBP15.38■□□□□ 0.05
PTPRF-206ENST00000429895 GLYATL1P3A0A0U1RQE8 302 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 RGSL1A5PLK6 1076 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 PLOD3O60568 738 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 FGF1P05230 155 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 BST1Q10588 318 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 FSTL1Q12841 308 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 NOGQ13253 232 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 CAPN13Q6MZZ7 669 aaPredicted RBP15.38■□□□□ 0.05
PTPRF-206ENST00000429895 TAF8Q7Z7C8 310 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 OAFQ86UD1 273 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 TOP6BLQ8N6T0 577 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 SLC9A6Q92581 669 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 DNASE1L2Q92874 299 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 AGO3Q9H9G7 860 aaKnown RBP15.38■□□□□ 0.05
PTPRF-206ENST00000429895 PHPT1Q9NRX4 125 aaPredicted RBP15.38■□□□□ 0.05
PTPRF-206ENST00000429895 OR6C75A6NL08 312 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.38■□□□□ 0.05
PTPRF-206ENST00000429895 SPATA31C2B4DYI2 1134 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 TMCC2O75069 709 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 UGT2B17O75795 530 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 TRBC1P01850 177 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 SULT2A1Q06520 285 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 FAM91A1Q658Y4 838 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 FAM71AQ8IYT1 594 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 PSMA8Q8TAA3 256 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 AP2M1Q96CW1 435 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 EBNA1BP2Q99848 306 aaKnown RBP15.38■□□□□ 0.05
PTPRF-206ENST00000429895 FBXO5Q9UKT4 447 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 U3KQV3 271 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 DCLK1O15075 740 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 CASP9P55211 416 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 TTMPQ5BVD1 217 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 TTC23Q5W5X9 447 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 PGBD2Q6P3X8 592 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 CMC1Q7Z7K0 106 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 AADATQ8N5Z0 425 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 ADAMTS15Q8TE58 950 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 PLEKHG4BQ96PX9 1271 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 C3orf18Q9UK00 162 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 RAP2CQ9Y3L5 183 aa15.38■□□□□ 0.05
PTPRF-206ENST00000429895 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.38■□□□□ 0.05
PTPRF-206ENST00000429895 SEC24AO95486 1093 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 CDH5P33151 784 aaPredicted RBP15.37■□□□□ 0.05
PTPRF-206ENST00000429895 CPTPQ5TA50 214 aa15.37■□□□□ 0.05
PTPRF-206ENST00000429895 NT5DC1Q5TFE4 455 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms