RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 SNAP29O95721 258 aa13.74□□□□□ -0.21
SGMS1-203ENST00000429490 OR1E1P30953 314 aa13.74□□□□□ -0.21
SGMS1-203ENST00000429490 PIGFQ07326 219 aa13.74□□□□□ -0.21
SGMS1-203ENST00000429490 GRB7Q14451 532 aa13.74□□□□□ -0.21
SGMS1-203ENST00000429490 SNX17Q15036 470 aa13.74□□□□□ -0.21
SGMS1-203ENST00000429490 ANKDD1AQ495B1 522 aa13.74□□□□□ -0.21
SGMS1-203ENST00000429490 FAM98BQ52LJ0 330 aaKnown RBP13.74□□□□□ -0.21
SGMS1-203ENST00000429490 FGD3Q5JSP0 725 aa13.74□□□□□ -0.21
SGMS1-203ENST00000429490 RAP1GAP2Q684P5 730 aa13.74□□□□□ -0.21
SGMS1-203ENST00000429490 CPNE9Q8IYJ1 553 aa13.74□□□□□ -0.21
SGMS1-203ENST00000429490 ZCCHC7Q8N3Z6 543 aaKnown RBP13.74□□□□□ -0.21
SGMS1-203ENST00000429490 OR10Q1Q8NGQ4 319 aa13.74□□□□□ -0.21
SGMS1-203ENST00000429490 DACH2Q96NX9 599 aa13.74□□□□□ -0.21
SGMS1-203ENST00000429490 OLFM1Q99784 485 aa13.74□□□□□ -0.21
SGMS1-203ENST00000429490 PKP3Q9Y446 797 aa13.74□□□□□ -0.21
SGMS1-203ENST00000429490 ONECUT3O60422 494 aaPredicted RBP13.73□□□□□ -0.21
SGMS1-203ENST00000429490 CDH3P22223 829 aa13.73□□□□□ -0.21
SGMS1-203ENST00000429490 GABRB3P28472 473 aa13.73□□□□□ -0.21
SGMS1-203ENST00000429490 ARHGDIAP52565 204 aa13.73□□□□□ -0.21
SGMS1-203ENST00000429490 PTPRNQ16849 979 aa13.73□□□□□ -0.21
SGMS1-203ENST00000429490 GLYATQ6IB77 296 aa13.73□□□□□ -0.21
SGMS1-203ENST00000429490 SEPT8Q92599 483 aa13.73□□□□□ -0.21
SGMS1-203ENST00000429490 BORCS5Q969J3 196 aa13.73□□□□□ -0.21
SGMS1-203ENST00000429490 MTFMTQ96DP5 389 aaKnown RBP13.73□□□□□ -0.21
SGMS1-203ENST00000429490 CDK15Q96Q40 435 aa13.73□□□□□ -0.21
SGMS1-203ENST00000429490 SEPT5Q99719 369 aaPredicted RBP13.73□□□□□ -0.21
SGMS1-203ENST00000429490 CHID1Q9BWS9 393 aa13.73□□□□□ -0.21
SGMS1-203ENST00000429490 COQ6Q9Y2Z9 468 aa13.73□□□□□ -0.21
SGMS1-203ENST00000429490 CEPT1Q9Y6K0 416 aa13.73□□□□□ -0.21
SGMS1-203ENST00000429490 CCL15-CCL14A0A0B4J2E2 113 aa13.73□□□□□ -0.21
SGMS1-203ENST00000429490 MEIS3P2A8K0S8 358 aa13.73□□□□□ -0.21
SGMS1-203ENST00000429490 ARPC2O15144 300 aa13.73□□□□□ -0.21
SGMS1-203ENST00000429490 CLASP2O75122 1294 aaKnown RBP13.73□□□□□ -0.21
SGMS1-203ENST00000429490 HK2P52789 917 aa13.73□□□□□ -0.21
SGMS1-203ENST00000429490 GRM2Q14416 872 aa13.73□□□□□ -0.21
SGMS1-203ENST00000429490 CCL15Q16663 113 aa13.73□□□□□ -0.21
SGMS1-203ENST00000429490 GNASQ5JWF2 1037 aa13.73□□□□□ -0.21
SGMS1-203ENST00000429490 DCLRE1AQ6PJP8 1040 aa13.73□□□□□ -0.21
SGMS1-203ENST00000429490 CLHC1Q8NHS4 586 aa13.73□□□□□ -0.21
SGMS1-203ENST00000429490 PCDH12Q9NPG4 1184 aa13.73□□□□□ -0.21
SGMS1-203ENST00000429490 VPS45Q9NRW7 570 aa13.73□□□□□ -0.21
SGMS1-203ENST00000429490 TAS2R13Q9NYV9 303 aa13.73□□□□□ -0.21
SGMS1-203ENST00000429490 RNF11Q9Y3C5 154 aa13.73□□□□□ -0.21
SGMS1-203ENST00000429490 PRSS51A0A1B0GVH4 220 aa13.73□□□□□ -0.21
SGMS1-203ENST00000429490 SLC12A8A0AV02 714 aa13.73□□□□□ -0.21
SGMS1-203ENST00000429490 PENKP01210 267 aaPredicted RBP13.73□□□□□ -0.21
SGMS1-203ENST00000429490 ODC1P11926 461 aa13.73□□□□□ -0.21
SGMS1-203ENST00000429490 HERC3Q15034 1050 aa13.73□□□□□ -0.21
SGMS1-203ENST00000429490 CPSF7Q8N684 471 aaKnown RBP13.73□□□□□ -0.21
SGMS1-203ENST00000429490 FAM110BQ8TC76 370 aa13.73□□□□□ -0.21
SGMS1-203ENST00000429490 ANKRD49Q8WVL7 239 aa13.73□□□□□ -0.21
SGMS1-203ENST00000429490 SMOQ99835 787 aa13.73□□□□□ -0.21
SGMS1-203ENST00000429490 RAD21L1Q9H4I0 556 aa13.73□□□□□ -0.21
SGMS1-203ENST00000429490 AGO3Q9H9G7 860 aaKnown RBP13.73□□□□□ -0.21
SGMS1-203ENST00000429490 PLK2Q9NYY3 685 aa13.73□□□□□ -0.21
SGMS1-203ENST00000429490 ANKRD33BA6NCL7 494 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 A8MX80 341 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 STX7O15400 261 aaKnown RBP13.72□□□□□ -0.21
SGMS1-203ENST00000429490 SNAP91O60641 907 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 RAMP2O60895 175 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 ELK4P28324 431 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 TSNQ15631 228 aaKnown RBP13.72□□□□□ -0.21
SGMS1-203ENST00000429490 ZBED5Q49AG3 693 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 AARS2Q5JTZ9 985 aaKnown RBP13.72□□□□□ -0.21
SGMS1-203ENST00000429490 PTRHD1Q6GMV3 140 aaKnown RBP13.72□□□□□ -0.21
SGMS1-203ENST00000429490 PRMT9Q6P2P2 845 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 GCNT7Q6ZNI0 430 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 C8orf59Q8N0T1 100 aaPredicted RBP13.72□□□□□ -0.21
SGMS1-203ENST00000429490 LSMEM2Q8N112 164 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 PPTC7Q8NI37 304 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 COX4I2Q96KJ9 171 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 ROGDIQ9GZN7 287 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 ZNF112Q9UJU3 913 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 PNMA8BQ9ULN7 279 aaPredicted RBP13.72□□□□□ -0.21
SGMS1-203ENST00000429490 ADAMTS5Q9UNA0 930 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 ATP11BQ9Y2G3 1177 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 NRCAMQ92823 1304 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 SH3BGRLO75368 114 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 OR1G1P47890 313 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 SLC10A7Q0GE19 358 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 DDR2Q16832 855 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 BROXQ5VW32 411 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 ERMP1Q7Z2K6 904 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 GALNT5Q7Z7M9 940 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 KIAA2013Q8IYS2 634 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 CFAP52Q8N1V2 620 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 OR13C4Q8NGS5 318 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 NAA50Q9GZZ1 169 aaKnown RBP13.72□□□□□ -0.21
SGMS1-203ENST00000429490 RIBC2Q9H4K1 309 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 IFT80Q9P2H3 777 aaPredicted RBP13.72□□□□□ -0.21
SGMS1-203ENST00000429490 NME7Q9Y5B8 376 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 DOCK5Q9H7D0 1870 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 COL5A3P25940 1745 aaPredicted RBP13.72□□□□□ -0.21
SGMS1-203ENST00000429490 ENPP3O14638 875 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 CD3EAPO15446 510 aaKnown RBP13.72□□□□□ -0.21
SGMS1-203ENST00000429490 SLC22A3O75751 556 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 IL7RP16871 459 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 IGFBP6P24592 240 aaPredicted RBP13.72□□□□□ -0.21
SGMS1-203ENST00000429490 GSK3BP49841 420 aa13.72□□□□□ -0.21
SGMS1-203ENST00000429490 CDC42EP1Q00587 391 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms