RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 A8MT66 165 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 GSTA4O15217 222 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 CHEK2O96017 543 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 IL1BP01584 269 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 FYNP06241 537 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 PYGLP06737 847 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 RBP1P09455 135 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 SPATA31D3P0C874 917 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 MTHFD1P11586 935 aaKnown RBP8.07□□□□□ -1.12
HPS4-205ENST00000429411 YAP1P46937 504 aaKnown RBP8.07□□□□□ -1.12
HPS4-205ENST00000429411 GPR15P49685 360 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 CPT1AP50416 773 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 PPP1R8Q12972 351 aaKnown RBP8.07□□□□□ -1.12
HPS4-205ENST00000429411 C16orf72Q14CZ0 275 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 ZNF792Q3KQV3 632 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 KCTD21Q4G0X4 260 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 KLHDC10Q6PID8 442 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 UNC5DQ6UXZ4 953 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 SPATA31D4Q6ZUB0 917 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 FRA10AC1Q70Z53 315 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 CHST15Q7LFX5 561 aaPredicted RBP8.07□□□□□ -1.12
HPS4-205ENST00000429411 NECAB2Q7Z6G3 386 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 RNF180Q86T96 592 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 CLEC4FQ8N1N0 589 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 MIER2Q8N344 545 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 SMG8Q8ND04 991 aaKnown RBP8.07□□□□□ -1.12
HPS4-205ENST00000429411 ZMIZ2Q8NF64 920 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 ERLEC1Q96DZ1 483 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 CCDC138Q96M89 665 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 IER2Q9BTL4 223 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 APOL5Q9BWW9 433 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 ZBTB26Q9HCK0 441 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 HACD3Q9P035 362 aa8.07□□□□□ -1.12
HPS4-205ENST00000429411 ZSCAN9O15535 394 aaPredicted RBP8.06□□□□□ -1.12
HPS4-205ENST00000429411 GUCA1CO95843 209 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 PRSS56P0CW18 603 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 ENPP1P22413 925 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 NR4A1P22736 598 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 PSMA4P25789 261 aaKnown RBP8.06□□□□□ -1.12
HPS4-205ENST00000429411 PIK3CGP48736 1102 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 KCNK10P57789 538 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 INPP5AQ14642 412 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 DCLRE1AQ6PJP8 1040 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 LILRA2Q8N149 483 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 PARP8Q8N3A8 854 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 CBR4Q8N4T8 237 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 ATAD1Q8NBU5 361 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 OR13C4Q8NGS5 318 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 STYXQ8WUJ0 223 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 RNF145Q96MT1 663 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 OLFM1Q99784 485 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 EGFL8Q99944 293 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 SLC25A23Q9BV35 468 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 OCEL1Q9H607 264 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 NDUFAF1Q9Y375 327 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 USP3Q9Y6I4 520 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 PAPPA2Q9BXP8 1791 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 A0A0U1RQS6 177 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 MYADML2A6NDP7 307 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 E9PAM4 449 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 AP3B1O00203 1094 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 BTN3A1O00481 513 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 SDHDO14521 159 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 GJB3O75712 270 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 CNTN5O94779 1100 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 SLC2A3P11169 496 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 WARSP23381 471 aaKnown RBP8.06□□□□□ -1.12
HPS4-205ENST00000429411 DPP6P42658 865 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 RENBPP51606 427 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 CRYBB1P53674 252 aaPredicted RBP8.06□□□□□ -1.12
HPS4-205ENST00000429411 DMPKQ09013 629 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 GALNT2Q10471 571 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 TRIM25Q14258 630 aaKnown RBP8.06□□□□□ -1.12
HPS4-205ENST00000429411 TIGD2Q4W5G0 525 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 OTUD1Q5VV17 481 aaPredicted RBP8.06□□□□□ -1.12
HPS4-205ENST00000429411 GRIN3AQ8TCU5 1115 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 TMIGD2Q96BF3 282 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 HMCESQ96FZ2 354 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 NSUN5Q96P11 429 aaKnown RBP8.06□□□□□ -1.12
HPS4-205ENST00000429411 AGO3Q9H9G7 860 aaKnown RBP8.06□□□□□ -1.12
HPS4-205ENST00000429411 GDAP2Q9NXN4 497 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.06□□□□□ -1.12
HPS4-205ENST00000429411 DNAJB4Q9UDY4 337 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 CDH9Q9ULB4 789 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 MYRFQ9Y2G1 1151 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 ARL5AQ9Y689 179 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 COL1A2P08123 1366 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 SMIM31A0A1B0GVY4 71 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 MOXD2PA6NHM9 499 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 STK25O00506 426 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 PIP5K1BO14986 540 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 CLOCKO15516 846 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 RAMP2O60895 175 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 E2F6O75461 281 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 STAU1O95793 577 aaKnown RBP8.06□□□□□ -1.12
HPS4-205ENST00000429411 PHEXP78562 749 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 SULT2A1Q06520 285 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 TSTA3Q13630 321 aaPredicted RBP8.06□□□□□ -1.12
HPS4-205ENST00000429411 POLD3Q15054 466 aaPredicted RBP8.06□□□□□ -1.12
HPS4-205ENST00000429411 ZBTB6Q15916 424 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms