RNA–Protein interactions for RNA: ENST00000429294.3

HLA-F-219, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-219ENST00000429294 SPOCK2Q92563 424 aa13.1□□□□□ -0.31
HLA-F-219ENST00000429294 NUDT22Q9BRQ3 303 aa13.1□□□□□ -0.31
HLA-F-219ENST00000429294 SNRNP25Q9BV90 132 aaKnown RBP13.1□□□□□ -0.31
HLA-F-219ENST00000429294 TEX101Q9BY14 249 aa13.1□□□□□ -0.31
HLA-F-219ENST00000429294 CDH19Q9H159 772 aa13.1□□□□□ -0.31
HLA-F-219ENST00000429294 PHTF1Q9UMS5 762 aa13.1□□□□□ -0.31
HLA-F-219ENST00000429294 SUFUQ9UMX1 484 aa13.1□□□□□ -0.31
HLA-F-219ENST00000429294 RP1L1Q8IWN7 2480 aaPredicted RBP13.1□□□□□ -0.31
HLA-F-219ENST00000429294 IGHV5-10-1A0A0J9YXX1 117 aa13.09□□□□□ -0.31
HLA-F-219ENST00000429294 TMCO5BA8MYB1 307 aa13.09□□□□□ -0.31
HLA-F-219ENST00000429294 PSMD11O00231 422 aa13.09□□□□□ -0.31
HLA-F-219ENST00000429294 CAPN5O15484 640 aaPredicted RBP13.09□□□□□ -0.31
HLA-F-219ENST00000429294 HEXIM1O94992 359 aaKnown RBP13.09□□□□□ -0.31
HLA-F-219ENST00000429294 CPP00450 1065 aa13.09□□□□□ -0.31
HLA-F-219ENST00000429294 GM2AP17900 193 aa13.09□□□□□ -0.31
HLA-F-219ENST00000429294 AK4P27144 223 aaPredicted RBP13.09□□□□□ -0.31
HLA-F-219ENST00000429294 CD1CP29017 333 aa13.09□□□□□ -0.31
HLA-F-219ENST00000429294 ANP32AP39687 249 aaKnown RBP13.09□□□□□ -0.31
HLA-F-219ENST00000429294 ARL4AP40617 200 aa13.09□□□□□ -0.31
HLA-F-219ENST00000429294 ACTR1BP42025 376 aa13.09□□□□□ -0.31
HLA-F-219ENST00000429294 NOP2P46087 812 aaKnown RBP13.09□□□□□ -0.31
HLA-F-219ENST00000429294 HCAR3P49019 387 aa13.09□□□□□ -0.31
HLA-F-219ENST00000429294 LIMK2P53671 638 aa13.09□□□□□ -0.31
HLA-F-219ENST00000429294 ACTR1AP61163 376 aa13.09□□□□□ -0.31
HLA-F-219ENST00000429294 OGDHQ02218 1023 aa13.09□□□□□ -0.31
HLA-F-219ENST00000429294 SLC10A7Q0GE19 358 aa13.09□□□□□ -0.31
HLA-F-219ENST00000429294 CNGA3Q16281 694 aa13.09□□□□□ -0.31
HLA-F-219ENST00000429294 CA9Q16790 459 aa13.09□□□□□ -0.31
HLA-F-219ENST00000429294 ARHGAP36Q6ZRI8 547 aa13.09□□□□□ -0.31
HLA-F-219ENST00000429294 USP45Q70EL2 814 aa13.09□□□□□ -0.31
HLA-F-219ENST00000429294 OR4D9Q8NGE8 314 aa13.09□□□□□ -0.31
HLA-F-219ENST00000429294 DTD2Q96FN9 168 aa13.09□□□□□ -0.31
HLA-F-219ENST00000429294 AHCYL2Q96HN2 611 aaKnown RBP13.09□□□□□ -0.31
HLA-F-219ENST00000429294 CCDC74BQ96LY2 380 aa13.09□□□□□ -0.31
HLA-F-219ENST00000429294 ERGIC2Q96RQ1 377 aa13.09□□□□□ -0.31
HLA-F-219ENST00000429294 KCTD15Q96SI1 283 aaPredicted RBP13.09□□□□□ -0.31
HLA-F-219ENST00000429294 FRMD8Q9BZ67 464 aaPredicted RBP13.09□□□□□ -0.31
HLA-F-219ENST00000429294 SLC39A1Q9NY26 324 aa13.09□□□□□ -0.31
HLA-F-219ENST00000429294 KCNK4Q9NYG8 393 aa13.09□□□□□ -0.31
HLA-F-219ENST00000429294 LIMA1Q9UHB6 759 aaKnown RBP13.09□□□□□ -0.31
HLA-F-219ENST00000429294 PCDHGC4Q9Y5F7 938 aa13.09□□□□□ -0.31
HLA-F-219ENST00000429294 H3BRJ5 948 aa13.08□□□□□ -0.32
HLA-F-219ENST00000429294 HTRA2O43464 458 aaPredicted RBP13.08□□□□□ -0.32
HLA-F-219ENST00000429294 IVLP07476 585 aa13.08□□□□□ -0.32
HLA-F-219ENST00000429294 FGF3P11487 239 aaPredicted RBP13.08□□□□□ -0.32
HLA-F-219ENST00000429294 ATP1A3P13637 1013 aa13.08□□□□□ -0.32
HLA-F-219ENST00000429294 TEAD1P28347 426 aa13.08□□□□□ -0.32
HLA-F-219ENST00000429294 MIPP30301 263 aa13.08□□□□□ -0.32
HLA-F-219ENST00000429294 MAN1A1P33908 653 aa13.08□□□□□ -0.32
HLA-F-219ENST00000429294 ADCY8P40145 1251 aa13.08□□□□□ -0.32
HLA-F-219ENST00000429294 ETV3P41162 512 aa13.08□□□□□ -0.32
HLA-F-219ENST00000429294 GPR1P46091 355 aa13.08□□□□□ -0.32
HLA-F-219ENST00000429294 CCR10P46092 362 aa13.08□□□□□ -0.32
HLA-F-219ENST00000429294 RAB15P59190 212 aa13.08□□□□□ -0.32
HLA-F-219ENST00000429294 GPLD1P80108 840 aa13.08□□□□□ -0.32
HLA-F-219ENST00000429294 CTBSQ01459 385 aa13.08□□□□□ -0.32
HLA-F-219ENST00000429294 MYL5Q02045 173 aa13.08□□□□□ -0.32
HLA-F-219ENST00000429294 RALGPS1Q5JS13 557 aa13.08□□□□□ -0.32
HLA-F-219ENST00000429294 DCAF12Q5T6F0 453 aa13.08□□□□□ -0.32
HLA-F-219ENST00000429294 ARMC12Q5T9G4 340 aa13.08□□□□□ -0.32
HLA-F-219ENST00000429294 PLEKHA7Q6IQ23 1121 aa13.08□□□□□ -0.32
HLA-F-219ENST00000429294 SASS6Q6UVJ0 657 aa13.08□□□□□ -0.32
HLA-F-219ENST00000429294 FAM129CQ86XR2 697 aa13.08□□□□□ -0.32
HLA-F-219ENST00000429294 NRROSQ86YC3 692 aa13.08□□□□□ -0.32
HLA-F-219ENST00000429294 CACNA2D3Q8IZS8 1091 aa13.08□□□□□ -0.32
HLA-F-219ENST00000429294 PELI3Q8N2H9 469 aa13.08□□□□□ -0.32
HLA-F-219ENST00000429294 NPWQ8N729 165 aa13.08□□□□□ -0.32
HLA-F-219ENST00000429294 FNIP1Q8TF40 1166 aa13.08□□□□□ -0.32
HLA-F-219ENST00000429294 HTR3CQ8WXA8 447 aa13.08□□□□□ -0.32
HLA-F-219ENST00000429294 ART4Q93070 314 aa13.08□□□□□ -0.32
HLA-F-219ENST00000429294 NKD1Q969G9 470 aa13.08□□□□□ -0.32
HLA-F-219ENST00000429294 KIAA1143Q96AT1 154 aaPredicted RBP13.08□□□□□ -0.32
HLA-F-219ENST00000429294 CATSPER2Q96P56 530 aa13.08□□□□□ -0.32
HLA-F-219ENST00000429294 TEFMQ96QE5 360 aaKnown RBP13.08□□□□□ -0.32
HLA-F-219ENST00000429294 NUDCD1Q96RS6 583 aa13.08□□□□□ -0.32
HLA-F-219ENST00000429294 DDA1Q9BW61 102 aa13.08□□□□□ -0.32
HLA-F-219ENST00000429294 SLC17A4Q9Y2C5 497 aa13.08□□□□□ -0.32
HLA-F-219ENST00000429294 SDK2Q58EX2 2172 aa13.08□□□□□ -0.32
HLA-F-219ENST00000429294 IGHV1OR21-1A0A087WYE8 117 aa13.07□□□□□ -0.32
HLA-F-219ENST00000429294 TMEM191CA6NGB0 347 aa13.07□□□□□ -0.32
HLA-F-219ENST00000429294 ZNF891A8MT65 544 aaPredicted RBP13.07□□□□□ -0.32
HLA-F-219ENST00000429294 PYGLP06737 847 aa13.07□□□□□ -0.32
HLA-F-219ENST00000429294 THRAP10827 490 aa13.07□□□□□ -0.32
HLA-F-219ENST00000429294 WT1P19544 449 aaPredicted RBP13.07□□□□□ -0.32
HLA-F-219ENST00000429294 UGT1A3P35503 534 aa13.07□□□□□ -0.32
HLA-F-219ENST00000429294 TLE1Q04724 770 aa13.07□□□□□ -0.32
HLA-F-219ENST00000429294 DPTQ07507 201 aa13.07□□□□□ -0.32
HLA-F-219ENST00000429294 SQSTM1Q13501 440 aa13.07□□□□□ -0.32
HLA-F-219ENST00000429294 NKAIN2Q5VXU1 208 aa13.07□□□□□ -0.32
HLA-F-219ENST00000429294 TMEM71Q6P5X7 295 aa13.07□□□□□ -0.32
HLA-F-219ENST00000429294 DOK6Q6PKX4 331 aa13.07□□□□□ -0.32
HLA-F-219ENST00000429294 TMCO3Q6UWJ1 677 aa13.07□□□□□ -0.32
HLA-F-219ENST00000429294 Q6ZVL8 140 aa13.07□□□□□ -0.32
HLA-F-219ENST00000429294 HSD11B1LQ7Z5J1 315 aa13.07□□□□□ -0.32
HLA-F-219ENST00000429294 NRSN1Q8IZ57 195 aa13.07□□□□□ -0.32
HLA-F-219ENST00000429294 NAGSQ8N159 534 aa13.07□□□□□ -0.32
HLA-F-219ENST00000429294 ATPAF2Q8N5M1 289 aa13.07□□□□□ -0.32
HLA-F-219ENST00000429294 OR10G6Q8NH81 332 aa13.07□□□□□ -0.32
HLA-F-219ENST00000429294 AP2M1Q96CW1 435 aa13.07□□□□□ -0.32
HLA-F-219ENST00000429294 SCRN2Q96FV2 425 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms