RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 PTSQ03393 145 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 ZP2Q05996 745 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 GPS2Q13227 327 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 NAB1Q13506 487 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 CAMK2GQ13555 558 aaPredicted RBP8.87□□□□□ -0.99
SMC6-204ENST00000428868 ELAVL3Q14576 367 aaKnown RBP8.87□□□□□ -0.99
SMC6-204ENST00000428868 GRM3Q14832 879 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 RASA2Q15283 850 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 UGP2Q16851 508 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 SLC44A4Q53GD3 710 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 NEPROQ6NW34 567 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 Q6ZS52 159 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 SH2D5Q6ZV89 423 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 DPPA4Q7L190 304 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 NLRP9Q7RTR0 991 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 HSD11B1LQ7Z5J1 315 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 CMC1Q7Z7K0 106 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 PIANPQ8IYJ0 282 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 DCLK2Q8N568 766 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 AADATQ8N5Z0 425 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 OTUD6BQ8N6M0 293 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 TXNDC5Q8NBS9 432 aaKnown RBP8.87□□□□□ -0.99
SMC6-204ENST00000428868 GPR26Q8NDV2 337 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 MDM1Q8TC05 714 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 SPOCK2Q92563 424 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 CDKL2Q92772 493 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 SCRN2Q96FV2 425 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 VPS39Q96JC1 886 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 LYSMD1Q96S90 227 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 CPNE1Q99829 537 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 SELENOSQ9BQE4 189 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 OSBPL1AQ9BXW6 950 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 TRABDQ9H4I3 376 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 C8orf33Q9H7E9 229 aaPredicted RBP8.87□□□□□ -0.99
SMC6-204ENST00000428868 CAB39LQ9H9S4 337 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 ZFYVE1Q9HBF4 777 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 CD248Q9HCU0 757 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 CD93Q9NPY3 652 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 SLC2A4RGQ9NR83 387 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 HACD3Q9P035 362 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 DKK3Q9UBP4 350 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 SERGEFQ9UGK8 458 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 CD84Q9UIB8 345 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 ZNF180Q9UJW8 692 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 FBXO5Q9UKT4 447 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 NDRG2Q9UN36 371 aaKnown RBP8.87□□□□□ -0.99
SMC6-204ENST00000428868 DUSP12Q9UNI6 340 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 SLC8A2Q9UPR5 921 aa8.87□□□□□ -0.99
SMC6-204ENST00000428868 C2orf81A6NN90 581 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 TPP1O14773 563 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 MID1O15344 667 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 CD3EAPO15446 510 aaKnown RBP8.86□□□□□ -0.99
SMC6-204ENST00000428868 SLC7A4O43246 635 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 S1PR4O95977 384 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 ALDOAP04075 364 aaKnown RBP8.86□□□□□ -0.99
SMC6-204ENST00000428868 PRNPP04156 253 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 ITGA2BP08514 1039 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 SNRPAP09012 282 aaKnown RBP8.86□□□□□ -0.99
SMC6-204ENST00000428868 ITGB7P26010 798 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 NTSR1P30989 418 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 VIPR1P32241 457 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 DRD3P35462 400 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 HMGCLP35914 325 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 STC1P52823 247 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 LIMK2P53671 638 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 CSE1LP55060 971 aaKnown RBP8.86□□□□□ -0.99
SMC6-204ENST00000428868 PPP2R2AP63151 447 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 CBX1P83916 185 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 CNTN1Q12860 1018 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 THOC5Q13769 683 aaKnown RBP8.86□□□□□ -0.99
SMC6-204ENST00000428868 CCINQ13939 588 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 ZNF460Q14592 562 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 MLF2Q15773 248 aaPredicted RBP8.86□□□□□ -0.99
SMC6-204ENST00000428868 PIP5KL1Q5T9C9 394 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 GRTP1Q5TC63 336 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 ARMC3Q5W041 872 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 TTC19Q6DKK2 380 aaPredicted RBP8.86□□□□□ -0.99
SMC6-204ENST00000428868 ZNF549Q6P9A3 640 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 ZNF449Q6P9G9 518 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 BRAT1Q6PJG6 821 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 FAM151BQ6UXP7 276 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 TMEM92Q6UXU6 159 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 USP45Q70EL2 814 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 MTERF4Q7Z6M4 381 aaKnown RBP8.86□□□□□ -0.99
SMC6-204ENST00000428868 CROCCP2Q86T23 111 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 ZC3HC1Q86WB0 502 aaKnown RBP8.86□□□□□ -0.99
SMC6-204ENST00000428868 CILP2Q8IUL8 1156 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 SLC41A1Q8IVJ1 513 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 SUGP1Q8IWZ8 645 aaKnown RBP8.86□□□□□ -0.99
SMC6-204ENST00000428868 TMIEQ8NEW7 156 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 OR4L1Q8NH43 312 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 RPLP0P6Q8NHW5 317 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 PBXIP1Q96AQ6 731 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 UHRF1Q96T88 793 aaPredicted RBP8.86□□□□□ -0.99
SMC6-204ENST00000428868 NDNQ99608 321 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 GABRG3Q99928 467 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 FAM167BQ9BTA0 163 aa8.86□□□□□ -0.99
SMC6-204ENST00000428868 WRAP53Q9BUR4 548 aaKnown RBP8.86□□□□□ -0.99
SMC6-204ENST00000428868 RSPH9Q9H1X1 276 aaPredicted RBP8.86□□□□□ -0.99
SMC6-204ENST00000428868 PPCSQ9HAB8 311 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms