RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 CDH19Q9H159 772 aa15.46■□□□□ 0.07
CTDSP1-202ENST00000428361 CARS2Q9HA77 564 aaKnown RBP15.46■□□□□ 0.07
CTDSP1-202ENST00000428361 EPB41L5Q9HCM4 733 aa15.46■□□□□ 0.07
CTDSP1-202ENST00000428361 GOLGA6AQ9NYA3 693 aa15.46■□□□□ 0.07
CTDSP1-202ENST00000428361 RPL26L1Q9UNX3 145 aaKnown RBP15.46■□□□□ 0.07
CTDSP1-202ENST00000428361 RAI2Q9Y5P3 530 aa15.46■□□□□ 0.07
CTDSP1-202ENST00000428361 B4DGG1 531 aa15.45■□□□□ 0.06
CTDSP1-202ENST00000428361 MATN3O15232 486 aa15.45■□□□□ 0.06
CTDSP1-202ENST00000428361 JMJD7P0C870 316 aa15.45■□□□□ 0.06
CTDSP1-202ENST00000428361 CCNB1P14635 433 aa15.45■□□□□ 0.06
CTDSP1-202ENST00000428361 HNRNPH3P31942 346 aaKnown RBP15.45■□□□□ 0.06
CTDSP1-202ENST00000428361 GPR1P46091 355 aa15.45■□□□□ 0.06
CTDSP1-202ENST00000428361 CCL7P80098 99 aa15.45■□□□□ 0.06
CTDSP1-202ENST00000428361 CDK3Q00526 305 aa15.45■□□□□ 0.06
CTDSP1-202ENST00000428361 DPYSL3Q14195 570 aa15.45■□□□□ 0.06
CTDSP1-202ENST00000428361 TCEA2Q15560 299 aa15.45■□□□□ 0.06
CTDSP1-202ENST00000428361 SLC18A3Q16572 532 aa15.45■□□□□ 0.06
CTDSP1-202ENST00000428361 SKOR2Q2VWA4 1001 aaPredicted RBP15.45■□□□□ 0.06
CTDSP1-202ENST00000428361 TXNRD3NBQ6F5E7 133 aa15.45■□□□□ 0.06
CTDSP1-202ENST00000428361 ALG1LQ6GMV1 187 aa15.45■□□□□ 0.06
CTDSP1-202ENST00000428361 ZNF765Q7L2R6 523 aa15.45■□□□□ 0.06
CTDSP1-202ENST00000428361 RAB11FIP2Q7L804 512 aa15.45■□□□□ 0.06
CTDSP1-202ENST00000428361 NLRP8Q86W28 1048 aa15.45■□□□□ 0.06
CTDSP1-202ENST00000428361 GPBAR1Q8TDU6 330 aa15.45■□□□□ 0.06
CTDSP1-202ENST00000428361 MAML1Q92585 1016 aa15.45■□□□□ 0.06
CTDSP1-202ENST00000428361 WBP1Q96G27 269 aa15.45■□□□□ 0.06
CTDSP1-202ENST00000428361 TSGA13Q96PP4 275 aa15.45■□□□□ 0.06
CTDSP1-202ENST00000428361 CMKLR1Q99788 373 aa15.45■□□□□ 0.06
CTDSP1-202ENST00000428361 MRPL40Q9NQ50 206 aaKnown RBP15.45■□□□□ 0.06
CTDSP1-202ENST00000428361 LRIT1Q9P2V4 623 aa15.45■□□□□ 0.06
CTDSP1-202ENST00000428361 PCDHGA7Q9Y5G6 932 aa15.45■□□□□ 0.06
CTDSP1-202ENST00000428361 BAHCC1Q9P281 2608 aa15.44■□□□□ 0.06
CTDSP1-202ENST00000428361 SSU72P8A0A1W2PR75 194 aa15.44■□□□□ 0.06
CTDSP1-202ENST00000428361 NPIPB15A6NHN6 443 aaPredicted RBP15.44■□□□□ 0.06
CTDSP1-202ENST00000428361 MFSD11O43934 449 aa15.44■□□□□ 0.06
CTDSP1-202ENST00000428361 NOBOXO60393 691 aa15.44■□□□□ 0.06
CTDSP1-202ENST00000428361 IVLP07476 585 aa15.44■□□□□ 0.06
CTDSP1-202ENST00000428361 GM2AP17900 193 aa15.44■□□□□ 0.06
CTDSP1-202ENST00000428361 LHCGRP22888 699 aa15.44■□□□□ 0.06
CTDSP1-202ENST00000428361 CASP14P31944 242 aa15.44■□□□□ 0.06
CTDSP1-202ENST00000428361 GJC1P36383 396 aa15.44■□□□□ 0.06
CTDSP1-202ENST00000428361 ETV3P41162 512 aa15.44■□□□□ 0.06
CTDSP1-202ENST00000428361 PDX1P52945 283 aa15.44■□□□□ 0.06
CTDSP1-202ENST00000428361 SKOR1P84550 965 aa15.44■□□□□ 0.06
CTDSP1-202ENST00000428361 VAC14Q08AM6 782 aa15.44■□□□□ 0.06
CTDSP1-202ENST00000428361 HLTFQ14527 1009 aaKnown RBP eCLIP15.44■□□□□ 0.06
CTDSP1-202ENST00000428361 ANKRD20A8PQ5CZ79 823 aa15.44■□□□□ 0.06
CTDSP1-202ENST00000428361 NCBP2-AS2Q69YL0 99 aa15.44■□□□□ 0.06
CTDSP1-202ENST00000428361 SPRED1Q7Z699 444 aa15.44■□□□□ 0.06
CTDSP1-202ENST00000428361 NRSN1Q8IZ57 195 aa15.44■□□□□ 0.06
CTDSP1-202ENST00000428361 OR8K1Q8NGG5 319 aa15.44■□□□□ 0.06
CTDSP1-202ENST00000428361 AP2M1Q96CW1 435 aa15.44■□□□□ 0.06
CTDSP1-202ENST00000428361 BBC3Q96PG8 261 aaPredicted RBP15.44■□□□□ 0.06
CTDSP1-202ENST00000428361 LGR4Q9BXB1 951 aa15.44■□□□□ 0.06
CTDSP1-202ENST00000428361 FRMD8Q9BZ67 464 aaPredicted RBP15.44■□□□□ 0.06
CTDSP1-202ENST00000428361 RBM22Q9NW64 420 aaKnown RBP eCLIP15.44■□□□□ 0.06
CTDSP1-202ENST00000428361 TTLL3Q9Y4R7 772 aa15.44■□□□□ 0.06
CTDSP1-202ENST00000428361 SHROOM3Q8TF72 1996 aa15.44■□□□□ 0.06
CTDSP1-202ENST00000428361 LOC400499M0QZD8 3231 aa15.43■□□□□ 0.06
CTDSP1-202ENST00000428361 A0A0J9YYE9 177 aa15.43■□□□□ 0.06
CTDSP1-202ENST00000428361 A0A1W2PQM1 296 aa15.43■□□□□ 0.06
CTDSP1-202ENST00000428361 TTC24A2A3L6 582 aaPredicted RBP15.43■□□□□ 0.06
CTDSP1-202ENST00000428361 RHPN2P1A8MT19 583 aa15.43■□□□□ 0.06
CTDSP1-202ENST00000428361 ZNF487B1APH4 448 aa15.43■□□□□ 0.06
CTDSP1-202ENST00000428361 FZD6O60353 706 aa15.43■□□□□ 0.06
CTDSP1-202ENST00000428361 TRBC1P01850 177 aa15.43■□□□□ 0.06
CTDSP1-202ENST00000428361 CEACAM5P06731 702 aa15.43■□□□□ 0.06
CTDSP1-202ENST00000428361 IL4RP24394 825 aa15.43■□□□□ 0.06
CTDSP1-202ENST00000428361 GPR3P46089 330 aa15.43■□□□□ 0.06
CTDSP1-202ENST00000428361 GNPDA1P46926 289 aa15.43■□□□□ 0.06
CTDSP1-202ENST00000428361 ARSEP51690 589 aa15.43■□□□□ 0.06
CTDSP1-202ENST00000428361 MMRN1Q13201 1228 aa15.43■□□□□ 0.06
CTDSP1-202ENST00000428361 MAP9Q49MG5 647 aa15.43■□□□□ 0.06
CTDSP1-202ENST00000428361 TAF1BQ53T94 588 aaPredicted RBP15.43■□□□□ 0.06
CTDSP1-202ENST00000428361 ODF2Q5BJF6 829 aa15.43■□□□□ 0.06
CTDSP1-202ENST00000428361 LRRC66Q68CR7 880 aa15.43■□□□□ 0.06
CTDSP1-202ENST00000428361 ADAMTSL4Q6UY14 1074 aa15.43■□□□□ 0.06
CTDSP1-202ENST00000428361 Q6ZVL8 140 aa15.43■□□□□ 0.06
CTDSP1-202ENST00000428361 HSD11B1LQ7Z5J1 315 aa15.43■□□□□ 0.06
CTDSP1-202ENST00000428361 VSIG1Q86XK7 387 aa15.43■□□□□ 0.06
CTDSP1-202ENST00000428361 CBARPQ8N350 705 aaPredicted RBP15.43■□□□□ 0.06
CTDSP1-202ENST00000428361 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.43■□□□□ 0.06
CTDSP1-202ENST00000428361 ZDHHC1Q8WTX9 485 aa15.43■□□□□ 0.06
CTDSP1-202ENST00000428361 SNRNP27Q8WVK2 155 aaKnown RBP15.43■□□□□ 0.06
CTDSP1-202ENST00000428361 PIH1D2Q8WWB5 315 aa15.43■□□□□ 0.06
CTDSP1-202ENST00000428361 FAF2Q96CS3 445 aa15.43■□□□□ 0.06
CTDSP1-202ENST00000428361 HDAC11Q96DB2 347 aa15.43■□□□□ 0.06
CTDSP1-202ENST00000428361 PRR11Q96HE9 360 aaPredicted RBP15.43■□□□□ 0.06
CTDSP1-202ENST00000428361 NSMCE3Q96MG7 304 aa15.43■□□□□ 0.06
CTDSP1-202ENST00000428361 DPYSL5Q9BPU6 564 aa15.43■□□□□ 0.06
CTDSP1-202ENST00000428361 RABGEF1Q9UJ41 708 aa15.43■□□□□ 0.06
CTDSP1-202ENST00000428361 ACSL6Q9UKU0 697 aa15.43■□□□□ 0.06
CTDSP1-202ENST00000428361 SLC17A4Q9Y2C5 497 aa15.43■□□□□ 0.06
CTDSP1-202ENST00000428361 COL27A1Q8IZC6 1860 aaPredicted RBP15.42■□□□□ 0.06
CTDSP1-202ENST00000428361 AKR1B10O60218 316 aa15.42■□□□□ 0.06
CTDSP1-202ENST00000428361 CPNE6O95741 557 aa15.42■□□□□ 0.06
CTDSP1-202ENST00000428361 CD48P09326 243 aa15.42■□□□□ 0.06
CTDSP1-202ENST00000428361 TMEM253P0C7T8 217 aa15.42■□□□□ 0.06
CTDSP1-202ENST00000428361 UGT1A5P35504 534 aa15.42■□□□□ 0.06
CTDSP1-202ENST00000428361 LRP8Q14114 963 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms