RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.38■□□□□ 0.53
PSPC1-202ENST00000427943 PTCD2Q8WV60 388 aaKnown RBP18.38■□□□□ 0.53
PSPC1-202ENST00000427943 FATE1Q969F0 183 aa18.38■□□□□ 0.53
PSPC1-202ENST00000427943 ZNF830Q96NB3 372 aaPredicted RBP18.38■□□□□ 0.53
PSPC1-202ENST00000427943 LGMNQ99538 433 aa18.38■□□□□ 0.53
PSPC1-202ENST00000427943 TEX101Q9BY14 249 aa18.38■□□□□ 0.53
PSPC1-202ENST00000427943 POLR1BQ9H9Y6 1135 aa18.38■□□□□ 0.53
PSPC1-202ENST00000427943 CARS2Q9HA77 564 aaKnown RBP18.38■□□□□ 0.53
PSPC1-202ENST00000427943 KCTD5Q9NXV2 234 aa18.38■□□□□ 0.53
PSPC1-202ENST00000427943 HYOU1Q9Y4L1 999 aa18.38■□□□□ 0.53
PSPC1-202ENST00000427943 HEY1Q9Y5J3 304 aa18.38■□□□□ 0.53
PSPC1-202ENST00000427943 A0A0J9YYE9 177 aa18.37■□□□□ 0.53
PSPC1-202ENST00000427943 A0A1W2PNU3 283 aaPredicted RBP18.37■□□□□ 0.53
PSPC1-202ENST00000427943 PMS2P1A4D2B8 440 aa18.37■□□□□ 0.53
PSPC1-202ENST00000427943 CAPN8A6NHC0 703 aa18.37■□□□□ 0.53
PSPC1-202ENST00000427943 C3orf70A6NLC5 250 aaPredicted RBP18.37■□□□□ 0.53
PSPC1-202ENST00000427943 KCNK1O00180 336 aa18.37■□□□□ 0.53
PSPC1-202ENST00000427943 PDE2AO00408 941 aaPredicted RBP18.37■□□□□ 0.53
PSPC1-202ENST00000427943 RRP8O43159 456 aaKnown RBP18.37■□□□□ 0.53
PSPC1-202ENST00000427943 TCEA3O75764 348 aa18.37■□□□□ 0.53
PSPC1-202ENST00000427943 MTA2O94776 668 aa18.37■□□□□ 0.53
PSPC1-202ENST00000427943 TRBC1P01850 177 aa18.37■□□□□ 0.53
PSPC1-202ENST00000427943 PDX1P52945 283 aa18.37■□□□□ 0.53
PSPC1-202ENST00000427943 ZBTB17Q13105 803 aa18.37■□□□□ 0.53
PSPC1-202ENST00000427943 TBX2Q13207 712 aaPredicted RBP18.37■□□□□ 0.53
PSPC1-202ENST00000427943 DOK6Q6PKX4 331 aa18.37■□□□□ 0.53
PSPC1-202ENST00000427943 NPNTQ6UXI9 565 aa18.37■□□□□ 0.53
PSPC1-202ENST00000427943 TECPR1Q7Z6L1 1165 aa18.37■□□□□ 0.53
PSPC1-202ENST00000427943 NDUFAF2Q8N183 169 aa18.37■□□□□ 0.53
PSPC1-202ENST00000427943 FAM46DQ8NEK8 389 aa18.37■□□□□ 0.53
PSPC1-202ENST00000427943 LPCAT1Q8NF37 534 aa18.37■□□□□ 0.53
PSPC1-202ENST00000427943 GPR156Q8NFN8 814 aa18.37■□□□□ 0.53
PSPC1-202ENST00000427943 NAF1Q96HR8 494 aaKnown RBP18.37■□□□□ 0.53
PSPC1-202ENST00000427943 CEP41Q9BYV8 373 aa18.37■□□□□ 0.53
PSPC1-202ENST00000427943 FRMD8Q9BZ67 464 aaPredicted RBP18.37■□□□□ 0.53
PSPC1-202ENST00000427943 HAUS2Q9NVX0 235 aa18.37■□□□□ 0.53
PSPC1-202ENST00000427943 AMACRQ9UHK6 382 aa18.37■□□□□ 0.53
PSPC1-202ENST00000427943 IGSF10Q6WRI0 2623 aa18.37■□□□□ 0.53
PSPC1-202ENST00000427943 LOC400499M0QZD8 3231 aa18.37■□□□□ 0.53
PSPC1-202ENST00000427943 NTN3O00634 580 aaPredicted RBP18.36■□□□□ 0.53
PSPC1-202ENST00000427943 APOL1O14791 398 aa18.36■□□□□ 0.53
PSPC1-202ENST00000427943 NOBOXO60393 691 aa18.36■□□□□ 0.53
PSPC1-202ENST00000427943 JCHAINP01591 159 aa18.36■□□□□ 0.53
PSPC1-202ENST00000427943 FUCA1P04066 466 aa18.36■□□□□ 0.53
PSPC1-202ENST00000427943 CEACAM5P06731 702 aa18.36■□□□□ 0.53
PSPC1-202ENST00000427943 KRT10P13645 584 aa18.36■□□□□ 0.53
PSPC1-202ENST00000427943 ARHGAP25P42331 645 aa18.36■□□□□ 0.53
PSPC1-202ENST00000427943 GPR1P46091 355 aa18.36■□□□□ 0.53
PSPC1-202ENST00000427943 GNPDA1P46926 289 aa18.36■□□□□ 0.53
PSPC1-202ENST00000427943 LSSP48449 732 aa18.36■□□□□ 0.53
PSPC1-202ENST00000427943 CCL7P80098 99 aa18.36■□□□□ 0.53
PSPC1-202ENST00000427943 PPIDQ08752 370 aaKnown RBP18.36■□□□□ 0.53
PSPC1-202ENST00000427943 FOXR1Q6PIV2 292 aa18.36■□□□□ 0.53
PSPC1-202ENST00000427943 WDR48Q8TAF3 677 aa18.36■□□□□ 0.53
PSPC1-202ENST00000427943 RNF25Q96BH1 459 aaPredicted RBP18.36■□□□□ 0.53
PSPC1-202ENST00000427943 ABCG8Q9H221 673 aa18.36■□□□□ 0.53
PSPC1-202ENST00000427943 DPEP2Q9H4A9 486 aa18.36■□□□□ 0.53
PSPC1-202ENST00000427943 PCDH9Q9HC56 1237 aa18.36■□□□□ 0.53
PSPC1-202ENST00000427943 SUFUQ9UMX1 484 aa18.36■□□□□ 0.53
PSPC1-202ENST00000427943 PTPRQQ9UMZ3 2332 aa18.36■□□□□ 0.53
PSPC1-202ENST00000427943 SOD1P00441 154 aa18.35■□□□□ 0.53
PSPC1-202ENST00000427943 PRLP01236 227 aa18.35■□□□□ 0.53
PSPC1-202ENST00000427943 RPLP0P05388 317 aaKnown RBP18.35■□□□□ 0.53
PSPC1-202ENST00000427943 MMP2P08253 660 aa18.35■□□□□ 0.53
PSPC1-202ENST00000427943 CA4P22748 312 aa18.35■□□□□ 0.53
PSPC1-202ENST00000427943 CD86P42081 329 aa18.35■□□□□ 0.53
PSPC1-202ENST00000427943 POLD2P49005 469 aa18.35■□□□□ 0.53
PSPC1-202ENST00000427943 PCBP4P57723 403 aaKnown RBP18.35■□□□□ 0.53
PSPC1-202ENST00000427943 DYNLT1P63172 113 aa18.35■□□□□ 0.53
PSPC1-202ENST00000427943 PTSQ03393 145 aa18.35■□□□□ 0.53
PSPC1-202ENST00000427943 AP1B1Q10567 949 aa18.35■□□□□ 0.53
PSPC1-202ENST00000427943 SLC9A4Q6AI14 798 aa18.35■□□□□ 0.53
PSPC1-202ENST00000427943 B4GALNT4Q76KP1 1039 aa18.35■□□□□ 0.53
PSPC1-202ENST00000427943 B3GNT8Q7Z7M8 397 aa18.35■□□□□ 0.53
PSPC1-202ENST00000427943 TRIM74Q86UV6 250 aa18.35■□□□□ 0.53
PSPC1-202ENST00000427943 RFX6Q8HWS3 928 aa18.35■□□□□ 0.53
PSPC1-202ENST00000427943 CNTD1Q8N815 330 aa18.35■□□□□ 0.53
PSPC1-202ENST00000427943 SCAMP4Q969E2 229 aa18.35■□□□□ 0.53
PSPC1-202ENST00000427943 AP2M1Q96CW1 435 aa18.35■□□□□ 0.53
PSPC1-202ENST00000427943 GFM1Q96RP9 751 aaKnown RBP18.35■□□□□ 0.53
PSPC1-202ENST00000427943 TRIM5Q9C035 493 aa18.35■□□□□ 0.53
PSPC1-202ENST00000427943 ASCL3Q9NQ33 180 aa18.35■□□□□ 0.53
PSPC1-202ENST00000427943 A0A1W2PQM1 296 aa18.34■□□□□ 0.53
PSPC1-202ENST00000427943 ZNF487B1APH4 448 aa18.34■□□□□ 0.53
PSPC1-202ENST00000427943 DXOO77932 396 aaKnown RBP18.34■□□□□ 0.53
PSPC1-202ENST00000427943 CLDN7O95471 211 aa18.34■□□□□ 0.53
PSPC1-202ENST00000427943 ZNF30P17039 623 aa18.34■□□□□ 0.53
PSPC1-202ENST00000427943 CES1P23141 567 aa18.34■□□□□ 0.53
PSPC1-202ENST00000427943 AK4P27144 223 aaPredicted RBP18.34■□□□□ 0.53
PSPC1-202ENST00000427943 TEAD1P28347 426 aa18.34■□□□□ 0.53
PSPC1-202ENST00000427943 STC1P52823 247 aa18.34■□□□□ 0.53
PSPC1-202ENST00000427943 IFI35P80217 286 aaPredicted RBP18.34■□□□□ 0.53
PSPC1-202ENST00000427943 DPTQ07507 201 aa18.34■□□□□ 0.53
PSPC1-202ENST00000427943 C14orf28Q4W4Y0 310 aa18.34■□□□□ 0.53
PSPC1-202ENST00000427943 ODF2Q5BJF6 829 aa18.34■□□□□ 0.53
PSPC1-202ENST00000427943 OGFOD3Q6PK18 319 aa18.34■□□□□ 0.53
PSPC1-202ENST00000427943 NRROSQ86YC3 692 aa18.34■□□□□ 0.53
PSPC1-202ENST00000427943 RHOT1Q8IXI2 618 aa18.34■□□□□ 0.53
PSPC1-202ENST00000427943 LSMEM2Q8N112 164 aa18.34■□□□□ 0.53
PSPC1-202ENST00000427943 Q8N9G6 341 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms