RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 TMCO3Q6UWJ1 677 aa10.04□□□□□ -0.8
GACAT3-201ENST00000426539 Q6ZVL8 140 aa10.04□□□□□ -0.8
GACAT3-201ENST00000426539 ZNF438Q7Z4V0 828 aa10.04□□□□□ -0.8
GACAT3-201ENST00000426539 TECPR1Q7Z6L1 1165 aa10.04□□□□□ -0.8
GACAT3-201ENST00000426539 JAMLQ86YT9 394 aa10.04□□□□□ -0.8
GACAT3-201ENST00000426539 PAF1Q8N7H5 531 aa10.04□□□□□ -0.8
GACAT3-201ENST00000426539 PDCD6IPQ8WUM4 868 aaKnown RBP10.04□□□□□ -0.8
GACAT3-201ENST00000426539 PIH1D2Q8WWB5 315 aa10.04□□□□□ -0.8
GACAT3-201ENST00000426539 BTBD6Q96KE9 485 aa10.04□□□□□ -0.8
GACAT3-201ENST00000426539 MCCC1Q96RQ3 725 aaPredicted RBP10.04□□□□□ -0.8
GACAT3-201ENST00000426539 SEMA6CQ9H3T2 930 aa10.04□□□□□ -0.8
GACAT3-201ENST00000426539 SUDS3Q9H7L9 328 aaPredicted RBP10.04□□□□□ -0.8
GACAT3-201ENST00000426539 CARS2Q9HA77 564 aaKnown RBP10.04□□□□□ -0.8
GACAT3-201ENST00000426539 PCDH18Q9HCL0 1135 aa10.04□□□□□ -0.8
GACAT3-201ENST00000426539 MRPL47Q9HD33 250 aaKnown RBP10.04□□□□□ -0.8
GACAT3-201ENST00000426539 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.04□□□□□ -0.8
GACAT3-201ENST00000426539 FOXJ2Q9P0K8 574 aa10.04□□□□□ -0.8
GACAT3-201ENST00000426539 PHTF1Q9UMS5 762 aa10.04□□□□□ -0.8
GACAT3-201ENST00000426539 PPIL1Q9Y3C6 166 aa10.04□□□□□ -0.8
GACAT3-201ENST00000426539 HELZ2Q9BYK8 2649 aaKnown RBP10.03□□□□□ -0.8
GACAT3-201ENST00000426539 ANKRD36A6QL64 1941 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 ZNF462Q96JM2 2506 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 KALRNO60229 2985 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 PRAMEF33A0A0G2JMD5 474 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 A0A1W2PQ67 120 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 C9orf172C9J069 976 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 PDE2AO00408 941 aaPredicted RBP10.03□□□□□ -0.8
GACAT3-201ENST00000426539 NVLO15381 856 aaKnown RBP10.03□□□□□ -0.8
GACAT3-201ENST00000426539 FZD6O60353 706 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 PRAMEF10O60809 474 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 PDHA1P08559 390 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 CD48P09326 243 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 CTPS1P17812 591 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 WT1P19544 449 aaPredicted RBP10.03□□□□□ -0.8
GACAT3-201ENST00000426539 TEAD1P28347 426 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 HSPA9P38646 679 aaKnown RBP10.03□□□□□ -0.8
GACAT3-201ENST00000426539 ARL4AP40617 200 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 POLD2P49005 469 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 ARSEP51690 589 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 OR1D5P58170 312 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 MMRN1Q13201 1228 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 ARHGEF7Q14155 803 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 NR1I3Q14994 352 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 NR1D2Q14995 579 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 C16orf72Q14CZ0 275 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 IQCB1Q15051 598 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 ZNF574Q6ZN55 896 aaPredicted RBP10.03□□□□□ -0.8
GACAT3-201ENST00000426539 ZFAND4Q86XD8 727 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 CPNE8Q86YQ8 564 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 TEX26Q8N6G2 289 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 NIPA2Q8N8Q9 360 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 EXD3Q8N9H8 876 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 ZDHHC1Q8WTX9 485 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 TEKT4Q8WW24 435 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 PATE1Q8WXA2 126 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 USP7Q93009 1102 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 TRIM11Q96F44 468 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 SCRN2Q96FV2 425 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 MED8Q96G25 268 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 NUDT22Q9BRQ3 303 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 FUCA2Q9BTY2 467 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 NAT10Q9H0A0 1025 aaKnown RBP10.03□□□□□ -0.8
GACAT3-201ENST00000426539 THAP2Q9H0W7 228 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 RDH14Q9HBH5 336 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 PHPT1Q9NRX4 125 aaPredicted RBP10.03□□□□□ -0.8
GACAT3-201ENST00000426539 TRNAU1APQ9NX07 287 aaKnown RBP10.03□□□□□ -0.8
GACAT3-201ENST00000426539 TAAR2Q9P1P5 351 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 SUFUQ9UMX1 484 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 SLC17A4Q9Y2C5 497 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 PLEKHM1Q9Y4G2 1056 aa10.03□□□□□ -0.8
GACAT3-201ENST00000426539 CFAP46Q8IYW2 2715 aa10.02□□□□□ -0.81
GACAT3-201ENST00000426539 CAPN8A6NHC0 703 aa10.02□□□□□ -0.81
GACAT3-201ENST00000426539 SMTNL1A8MU46 457 aa10.02□□□□□ -0.81
GACAT3-201ENST00000426539 B8ZZF3 427 aa10.02□□□□□ -0.81
GACAT3-201ENST00000426539 GOLGA6L22H0YM25 854 aa10.02□□□□□ -0.81
GACAT3-201ENST00000426539 PYCARD-AS1I3L0S3 204 aa10.02□□□□□ -0.81
GACAT3-201ENST00000426539 J3QKU1 62 aa10.02□□□□□ -0.81
GACAT3-201ENST00000426539 PSMD11O00231 422 aa10.02□□□□□ -0.81
GACAT3-201ENST00000426539 ECEL1O95672 775 aa10.02□□□□□ -0.81
GACAT3-201ENST00000426539 IVLP07476 585 aa10.02□□□□□ -0.81
GACAT3-201ENST00000426539 JMJD7P0C870 316 aa10.02□□□□□ -0.81
GACAT3-201ENST00000426539 LIPCP11150 499 aa10.02□□□□□ -0.81
GACAT3-201ENST00000426539 CYP2A6P11509 494 aaPredicted RBP10.02□□□□□ -0.81
GACAT3-201ENST00000426539 CCL4P13236 92 aa10.02□□□□□ -0.81
GACAT3-201ENST00000426539 CD1CP29017 333 aa10.02□□□□□ -0.81
GACAT3-201ENST00000426539 ADCY8P40145 1251 aa10.02□□□□□ -0.81
GACAT3-201ENST00000426539 PBX1P40424 430 aa10.02□□□□□ -0.81
GACAT3-201ENST00000426539 MMP13P45452 471 aa10.02□□□□□ -0.81
GACAT3-201ENST00000426539 GNPDA1P46926 289 aa10.02□□□□□ -0.81
GACAT3-201ENST00000426539 ZNF165P49910 485 aa10.02□□□□□ -0.81
GACAT3-201ENST00000426539 ARSDP51689 593 aa10.02□□□□□ -0.81
GACAT3-201ENST00000426539 CTBSQ01459 385 aa10.02□□□□□ -0.81
GACAT3-201ENST00000426539 PIGHQ14442 188 aaPredicted RBP10.02□□□□□ -0.81
GACAT3-201ENST00000426539 AMZ1Q400G9 498 aa10.02□□□□□ -0.81
GACAT3-201ENST00000426539 FILIP1LQ4L180 1135 aa10.02□□□□□ -0.81
GACAT3-201ENST00000426539 FIGNQ5HY92 759 aa10.02□□□□□ -0.81
GACAT3-201ENST00000426539 MARC1Q5VT66 337 aa10.02□□□□□ -0.81
GACAT3-201ENST00000426539 SLC30A9Q6PML9 568 aa10.02□□□□□ -0.81
GACAT3-201ENST00000426539 USP53Q70EK8 1073 aa10.02□□□□□ -0.81
GACAT3-201ENST00000426539 DTX1Q86Y01 620 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms