RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 COLQQ9Y215 455 aaPredicted RBP15.19■□□□□ 0.02
ACTB-204ENST00000425660 TRIOBPQ9H2D6 2365 aa15.19■□□□□ 0.02
ACTB-204ENST00000425660 KIF26AQ9ULI4 1882 aaPredicted RBP15.18■□□□□ 0.02
ACTB-204ENST00000425660 KLHL2O95198 593 aa15.18■□□□□ 0.02
ACTB-204ENST00000425660 ALDH3A1P30838 453 aa15.18■□□□□ 0.02
ACTB-204ENST00000425660 HNF1BP35680 557 aa15.18■□□□□ 0.02
ACTB-204ENST00000425660 NNMTP40261 264 aa15.18■□□□□ 0.02
ACTB-204ENST00000425660 SUOXP51687 545 aa15.18■□□□□ 0.02
ACTB-204ENST00000425660 BST1Q10588 318 aa15.18■□□□□ 0.02
ACTB-204ENST00000425660 ZNF460Q14592 562 aa15.18■□□□□ 0.02
ACTB-204ENST00000425660 CHI3L2Q15782 390 aa15.18■□□□□ 0.02
ACTB-204ENST00000425660 TSNAXIP1Q2TAA8 658 aa15.18■□□□□ 0.02
ACTB-204ENST00000425660 CES4AQ5XG92 561 aa15.18■□□□□ 0.02
ACTB-204ENST00000425660 TANGO2Q6ICL3 276 aa15.18■□□□□ 0.02
ACTB-204ENST00000425660 ZNF549Q6P9A3 640 aa15.18■□□□□ 0.02
ACTB-204ENST00000425660 VITQ6UXI7 678 aa15.18■□□□□ 0.02
ACTB-204ENST00000425660 RDH11Q8TC12 318 aa15.18■□□□□ 0.02
ACTB-204ENST00000425660 LPGAT1Q92604 370 aa15.18■□□□□ 0.02
ACTB-204ENST00000425660 ZFYVE19Q96K21 471 aa15.18■□□□□ 0.02
ACTB-204ENST00000425660 UBXN10Q96LJ8 280 aa15.18■□□□□ 0.02
ACTB-204ENST00000425660 GPR63Q9BZJ6 419 aa15.18■□□□□ 0.02
ACTB-204ENST00000425660 S1PR5Q9H228 398 aa15.18■□□□□ 0.02
ACTB-204ENST00000425660 CLEC1BQ9P126 229 aa15.18■□□□□ 0.02
ACTB-204ENST00000425660 VPS9D1Q9Y2B5 631 aa15.18■□□□□ 0.02
ACTB-204ENST00000425660 ARL2BPQ9Y2Y0 163 aa15.18■□□□□ 0.02
ACTB-204ENST00000425660 TARM1B6A8C7 271 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 G3V2L1 256 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 SLC4A1P02730 911 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 FGF3P11487 239 aaPredicted RBP15.17■□□□□ 0.02
ACTB-204ENST00000425660 NEFHP12036 1026 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 CPA3P15088 417 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 FDXRP22570 491 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 PMLP29590 882 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 MC4RP32245 332 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 TTPAP49638 278 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 PGGT1BP53609 377 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 ADARP55265 1226 aaKnown RBP15.17■□□□□ 0.02
ACTB-204ENST00000425660 IRX4P78413 519 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 OCRLQ01968 901 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 ATAT1Q5SQI0 421 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 RNF187Q5TA31 235 aaPredicted RBP15.17■□□□□ 0.02
ACTB-204ENST00000425660 KDM1BQ8NB78 822 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 CYB5D2Q8WUJ1 264 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 KCTD4Q8WVF5 259 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 SORCS1Q8WY21 1168 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 PLCD4Q9BRC7 762 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 ZDHHC6Q9H6R6 413 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 POPDC3Q9HBV1 291 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 HPS4Q9NQG7 708 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 LMCD1Q9NZU5 365 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 KLHL14Q9P2G3 628 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 MID2Q9UJV3 735 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 CRYL1Q9Y2S2 319 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 UNC80Q8N2C7 3258 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 MYO9BQ13459 2157 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 A0A0U1RQS6 177 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 C1orf232A0A0U1RR37 186 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 SBK3P0C264 359 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 PRSS56P0CW18 603 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 KCNA4P22459 653 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 RECQLP46063 649 aaPredicted RBP15.17■□□□□ 0.02
ACTB-204ENST00000425660 CDKN2DP55273 166 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 TIAL1Q01085 375 aaKnown RBP eCLIP15.17■□□□□ 0.022e-13■■□□□ 13
ACTB-204ENST00000425660 DLG1Q12959 904 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 EIF4HQ15056 248 aaKnown RBP15.17■□□□□ 0.02
ACTB-204ENST00000425660 CTC1Q2NKJ3 1217 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 AARS2Q5JTZ9 985 aaKnown RBP15.17■□□□□ 0.02
ACTB-204ENST00000425660 PSAPL1Q6NUJ1 521 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 TPRG1Q6ZUI0 275 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 USP45Q70EL2 814 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 C10orf107Q8IVU9 208 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 PIANPQ8IYJ0 282 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 CBARPQ8N350 705 aaPredicted RBP15.17■□□□□ 0.02
ACTB-204ENST00000425660 FSTL5Q8N475 847 aaPredicted RBP15.17■□□□□ 0.02
ACTB-204ENST00000425660 CHST14Q8NCH0 376 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 TTC8Q8TAM2 541 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 GRIN3AQ8TCU5 1115 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 ZNF398Q8TD17 642 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 MYLIPQ8WY64 445 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 LRIG1Q96JA1 1093 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 TSNARE1Q96NA8 513 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 CIPCQ9C0C6 399 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 BPIFA1Q9NP55 256 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 ELOVL2Q9NXB9 296 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 DEC1Q9P2X7 70 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 SLC8A2Q9UPR5 921 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 WASF2Q9Y6W5 498 aa15.17■□□□□ 0.02
ACTB-204ENST00000425660 NPIPB15A6NHN6 443 aaPredicted RBP15.16■□□□□ 0.02
ACTB-204ENST00000425660 TTC34A8MYJ7 566 aa15.16■□□□□ 0.02
ACTB-204ENST00000425660 GAPDHSO14556 408 aaPredicted RBP15.16■□□□□ 0.02
ACTB-204ENST00000425660 PFDN6O15212 129 aa15.16■□□□□ 0.02
ACTB-204ENST00000425660 CD9P21926 228 aa15.16■□□□□ 0.02
ACTB-204ENST00000425660 GRK2P25098 689 aa15.16■□□□□ 0.02
ACTB-204ENST00000425660 POLR2LP62875 67 aaKnown RBP15.16■□□□□ 0.02
ACTB-204ENST00000425660 CACNG1Q06432 222 aa15.16■□□□□ 0.02
ACTB-204ENST00000425660 MESP2Q0VG99 397 aa15.16■□□□□ 0.02
ACTB-204ENST00000425660 IFT88Q13099 833 aa15.16■□□□□ 0.02
ACTB-204ENST00000425660 CES5AQ6NT32 575 aa15.16■□□□□ 0.02
ACTB-204ENST00000425660 BRAT1Q6PJG6 821 aa15.16■□□□□ 0.02
ACTB-204ENST00000425660 GDPD4Q6W3E5 623 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms