RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 TM9SF4Q92544 642 aa4.46□□□□□ -1.7
LINC01040-201ENST00000425048 STAMBPL1Q96FJ0 436 aa4.46□□□□□ -1.7
LINC01040-201ENST00000425048 SCRN2Q96FV2 425 aa4.46□□□□□ -1.7
LINC01040-201ENST00000425048 ATOH8Q96SQ7 321 aa4.46□□□□□ -1.7
LINC01040-201ENST00000425048 CMKLR1Q99788 373 aa4.46□□□□□ -1.7
LINC01040-201ENST00000425048 EGFL8Q99944 293 aa4.46□□□□□ -1.7
LINC01040-201ENST00000425048 SH3GL2Q99962 352 aa4.46□□□□□ -1.7
LINC01040-201ENST00000425048 PAGR1Q9BTK6 254 aa4.46□□□□□ -1.7
LINC01040-201ENST00000425048 NUF2Q9BZD4 464 aa4.46□□□□□ -1.7
LINC01040-201ENST00000425048 KCNN2Q9H2S1 579 aa4.46□□□□□ -1.7
LINC01040-201ENST00000425048 NOD2Q9HC29 1040 aa4.46□□□□□ -1.7
LINC01040-201ENST00000425048 ZNF624Q9P2J8 865 aaPredicted RBP4.46□□□□□ -1.7
LINC01040-201ENST00000425048 DLGAP4Q9Y2H0 992 aa4.46□□□□□ -1.7
LINC01040-201ENST00000425048 LOXL2Q9Y4K0 774 aa4.46□□□□□ -1.7
LINC01040-201ENST00000425048 PEX12O00623 359 aa4.45□□□□□ -1.7
LINC01040-201ENST00000425048 MAOAP21397 527 aa4.45□□□□□ -1.7
LINC01040-201ENST00000425048 BDKRB2P30411 391 aa4.45□□□□□ -1.7
LINC01040-201ENST00000425048 HTR3AP46098 478 aa4.45□□□□□ -1.7
LINC01040-201ENST00000425048 METAP2P50579 478 aaKnown RBP eCLIP4.45□□□□□ -1.7
LINC01040-201ENST00000425048 EFNA5P52803 228 aa4.45□□□□□ -1.7
LINC01040-201ENST00000425048 VEPH1Q14D04 833 aa4.45□□□□□ -1.7
LINC01040-201ENST00000425048 CCDC96Q2M329 555 aa4.45□□□□□ -1.7
LINC01040-201ENST00000425048 C1orf228Q6PIY5 440 aa4.45□□□□□ -1.7
LINC01040-201ENST00000425048 CPLX2Q6PUV4 134 aaKnown RBP4.45□□□□□ -1.7
LINC01040-201ENST00000425048 GPAT4Q86UL3 456 aa4.45□□□□□ -1.7
LINC01040-201ENST00000425048 ZCCHC9Q8N567 271 aaKnown RBP4.45□□□□□ -1.7
LINC01040-201ENST00000425048 TRIM58Q8NG06 486 aa4.45□□□□□ -1.7
LINC01040-201ENST00000425048 TMEM190Q8WZ59 177 aa4.45□□□□□ -1.7
LINC01040-201ENST00000425048 MAGEE1Q9HCI5 957 aa4.45□□□□□ -1.7
LINC01040-201ENST00000425048 MAP3K20Q9NYL2 800 aaKnown RBP4.45□□□□□ -1.7
LINC01040-201ENST00000425048 IGLV5-45A0A087WSX0 123 aa4.44□□□□□ -1.7
LINC01040-201ENST00000425048 TMEM202A6NGA9 273 aa4.44□□□□□ -1.7
LINC01040-201ENST00000425048 IGHV4-39P01824 125 aa4.44□□□□□ -1.7
LINC01040-201ENST00000425048 CYC1P08574 325 aa4.44□□□□□ -1.7
LINC01040-201ENST00000425048 ZNF234Q14588 700 aa4.44□□□□□ -1.7
LINC01040-201ENST00000425048 TAF11Q15544 211 aa4.44□□□□□ -1.7
LINC01040-201ENST00000425048 METTL2BQ6P1Q9 378 aaKnown RBP4.44□□□□□ -1.7
LINC01040-201ENST00000425048 TMTC1Q8IUR5 882 aa4.44□□□□□ -1.7
LINC01040-201ENST00000425048 CEP70Q8NHQ1 597 aa4.44□□□□□ -1.7
LINC01040-201ENST00000425048 METTL2AQ96IZ6 378 aaKnown RBP4.44□□□□□ -1.7
LINC01040-201ENST00000425048 MROH8Q9H579 483 aa4.44□□□□□ -1.7
LINC01040-201ENST00000425048 SNTG1Q9NSN8 517 aa4.44□□□□□ -1.7
LINC01040-201ENST00000425048 IL1RAPL1Q9NZN1 696 aa4.44□□□□□ -1.7
LINC01040-201ENST00000425048 PEMTQ9UBM1 199 aa4.44□□□□□ -1.7
LINC01040-201ENST00000425048 FBXO9Q9UK97 447 aaPredicted RBP4.44□□□□□ -1.7
LINC01040-201ENST00000425048 TTC7AQ9ULT0 858 aaPredicted RBP4.44□□□□□ -1.7
LINC01040-201ENST00000425048 IGKV6D-41A0A0C4DH26 115 aa4.43□□□□□ -1.7
LINC01040-201ENST00000425048 KRTAP16-1A8MUX0 517 aa4.43□□□□□ -1.7
LINC01040-201ENST00000425048 F5H423 210 aaPredicted RBP4.43□□□□□ -1.7
LINC01040-201ENST00000425048 BCAT2O15382 392 aaPredicted RBP4.43□□□□□ -1.7
LINC01040-201ENST00000425048 SP100P23497 879 aaPredicted RBP4.43□□□□□ -1.7
LINC01040-201ENST00000425048 IRX6P78412 446 aaPredicted RBP4.43□□□□□ -1.7
LINC01040-201ENST00000425048 GRIK3Q13003 919 aa4.43□□□□□ -1.7
LINC01040-201ENST00000425048 ANKRD1Q15327 319 aa4.43□□□□□ -1.7
LINC01040-201ENST00000425048 TCTN1Q2MV58 587 aa4.43□□□□□ -1.7
LINC01040-201ENST00000425048 SLC45A4Q5BKX6 768 aa4.43□□□□□ -1.7
LINC01040-201ENST00000425048 C15orf39Q6ZRI6 1047 aa4.43□□□□□ -1.7
LINC01040-201ENST00000425048 WDR20Q8TBZ3 569 aa4.43□□□□□ -1.7
LINC01040-201ENST00000425048 PIGTQ969N2 578 aa4.43□□□□□ -1.7
LINC01040-201ENST00000425048 LINC00479Q96M42 142 aa4.43□□□□□ -1.7
LINC01040-201ENST00000425048 NEURL2Q9BR09 285 aa4.43□□□□□ -1.7
LINC01040-201ENST00000425048 FAM167BQ9BTA0 163 aa4.43□□□□□ -1.7
LINC01040-201ENST00000425048 TAOK3Q9H2K8 898 aa4.43□□□□□ -1.7
LINC01040-201ENST00000425048 NDST4Q9H3R1 872 aa4.43□□□□□ -1.7
LINC01040-201ENST00000425048 MMP25Q9NPA2 562 aa4.43□□□□□ -1.7
LINC01040-201ENST00000425048 GPR108Q9NPR9 543 aa4.43□□□□□ -1.7
LINC01040-201ENST00000425048 RASSF1Q9NS23 344 aa4.43□□□□□ -1.7
LINC01040-201ENST00000425048 SLC7A10Q9NS82 523 aa4.43□□□□□ -1.7
LINC01040-201ENST00000425048 KIAA1456Q9P272 454 aa4.43□□□□□ -1.7
LINC01040-201ENST00000425048 CTNNAL1Q9UBT7 734 aa4.43□□□□□ -1.7
LINC01040-201ENST00000425048 LSM4Q9Y4Z0 139 aaKnown RBP4.43□□□□□ -1.7
LINC01040-201ENST00000425048 CTAGE9A4FU28 777 aa4.42□□□□□ -1.7
LINC01040-201ENST00000425048 PSMD14O00487 310 aa4.42□□□□□ -1.7
LINC01040-201ENST00000425048 SYNGR3O43761 229 aa4.42□□□□□ -1.7
LINC01040-201ENST00000425048 CTAGE8P0CG41 777 aa4.42□□□□□ -1.7
LINC01040-201ENST00000425048 PRSS56P0CW18 603 aa4.42□□□□□ -1.7
LINC01040-201ENST00000425048 TBX4P57082 545 aa4.42□□□□□ -1.7
LINC01040-201ENST00000425048 WDR38Q5JTN6 314 aa4.42□□□□□ -1.7
LINC01040-201ENST00000425048 TTI2Q6NXR4 508 aa4.42□□□□□ -1.7
LINC01040-201ENST00000425048 FAM171BQ6P995 826 aa4.42□□□□□ -1.7
LINC01040-201ENST00000425048 TADA2BQ86TJ2 420 aa4.42□□□□□ -1.7
LINC01040-201ENST00000425048 APLFQ8IW19 511 aaPredicted RBP4.42□□□□□ -1.7
LINC01040-201ENST00000425048 CTAGE4Q8IX94 777 aa4.42□□□□□ -1.7
LINC01040-201ENST00000425048 SPATA6LQ8N4H0 392 aa4.42□□□□□ -1.7
LINC01040-201ENST00000425048 USP38Q8NB14 1042 aa4.42□□□□□ -1.7
LINC01040-201ENST00000425048 OR2AK2Q8NG84 335 aa4.42□□□□□ -1.7
LINC01040-201ENST00000425048 POF1BQ8WVV4 589 aa4.42□□□□□ -1.7
LINC01040-201ENST00000425048 TFB2MQ9H5Q4 396 aaKnown RBP4.42□□□□□ -1.7
LINC01040-201ENST00000425048 BPIFA1Q9NP55 256 aa4.42□□□□□ -1.7
LINC01040-201ENST00000425048 FAM96BQ9Y3D0 163 aa4.42□□□□□ -1.7
LINC01040-201ENST00000425048 C2CD2Q9Y426 696 aa4.42□□□□□ -1.7
LINC01040-201ENST00000425048 ZNHIT1O43257 154 aa4.41□□□□□ -1.7
LINC01040-201ENST00000425048 PRKNO60260 465 aaPredicted RBP4.41□□□□□ -1.7
LINC01040-201ENST00000425048 MT-CYBP00156 380 aaPredicted RBP4.41□□□□□ -1.7
LINC01040-201ENST00000425048 VEGFAP15692 232 aaPredicted RBP4.41□□□□□ -1.7
LINC01040-201ENST00000425048 EDN2P20800 178 aa4.41□□□□□ -1.7
LINC01040-201ENST00000425048 DSCR10P59022 87 aa4.41□□□□□ -1.7
LINC01040-201ENST00000425048 C2orf68Q2NKX9 166 aa4.41□□□□□ -1.7
LINC01040-201ENST00000425048 ADCK5Q3MIX3 580 aa4.41□□□□□ -1.7
LINC01040-201ENST00000425048 TMEM35AQ53FP2 167 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms