RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 NSMCE1Q8WV22 266 aa12.99□□□□□ -0.33
VRK3-203ENST00000424804 PTCD2Q8WV60 388 aaKnown RBP12.99□□□□□ -0.33
VRK3-203ENST00000424804 PSKH2Q96QS6 385 aa12.99□□□□□ -0.33
VRK3-203ENST00000424804 PANX2Q96RD6 677 aa12.99□□□□□ -0.33
VRK3-203ENST00000424804 FOXP3Q9BZS1 431 aa12.99□□□□□ -0.33
VRK3-203ENST00000424804 TMEM168Q9H0V1 697 aa12.99□□□□□ -0.33
VRK3-203ENST00000424804 ATP13A3Q9H7F0 1226 aa12.99□□□□□ -0.33
VRK3-203ENST00000424804 ACSL6Q9UKU0 697 aa12.99□□□□□ -0.33
VRK3-203ENST00000424804 PCDHGA7Q9Y5G6 932 aa12.99□□□□□ -0.33
VRK3-203ENST00000424804 PCDHA13Q9Y5I0 950 aa12.99□□□□□ -0.33
VRK3-203ENST00000424804 A8MX80 341 aa12.98□□□□□ -0.33
VRK3-203ENST00000424804 TNFRSF10CO14798 259 aa12.98□□□□□ -0.33
VRK3-203ENST00000424804 PLD2O14939 933 aa12.98□□□□□ -0.33
VRK3-203ENST00000424804 B4GAT1O43505 415 aa12.98□□□□□ -0.33
VRK3-203ENST00000424804 KRT1P04264 644 aa12.98□□□□□ -0.33
VRK3-203ENST00000424804 CTSEP14091 401 aa12.98□□□□□ -0.33
VRK3-203ENST00000424804 HTR1BP28222 390 aa12.98□□□□□ -0.33
VRK3-203ENST00000424804 SERPINA4P29622 427 aa12.98□□□□□ -0.33
VRK3-203ENST00000424804 SLC5A2P31639 672 aa12.98□□□□□ -0.33
VRK3-203ENST00000424804 MAN1A1P33908 653 aa12.98□□□□□ -0.33
VRK3-203ENST00000424804 ETV5P41161 510 aa12.98□□□□□ -0.33
VRK3-203ENST00000424804 ARHGAP25P42331 645 aa12.98□□□□□ -0.33
VRK3-203ENST00000424804 BCL2L1Q07817 233 aa12.98□□□□□ -0.33
VRK3-203ENST00000424804 RFTN1Q14699 578 aaPredicted RBP12.98□□□□□ -0.33
VRK3-203ENST00000424804 LBRQ14739 615 aaKnown RBP12.98□□□□□ -0.33
VRK3-203ENST00000424804 PDK2Q15119 407 aa12.98□□□□□ -0.33
VRK3-203ENST00000424804 TGIF1Q15583 401 aa12.98□□□□□ -0.33
VRK3-203ENST00000424804 ANKRD20A8PQ5CZ79 823 aa12.98□□□□□ -0.33
VRK3-203ENST00000424804 CERCAMQ5T4B2 595 aa12.98□□□□□ -0.33
VRK3-203ENST00000424804 PNCKQ6P2M8 343 aa12.98□□□□□ -0.33
VRK3-203ENST00000424804 FOXR1Q6PIV2 292 aa12.98□□□□□ -0.33
VRK3-203ENST00000424804 RAB11FIP2Q7L804 512 aa12.98□□□□□ -0.33
VRK3-203ENST00000424804 ZNF605Q86T29 641 aa12.98□□□□□ -0.33
VRK3-203ENST00000424804 TMTC1Q8IUR5 882 aa12.98□□□□□ -0.33
VRK3-203ENST00000424804 SLITRK4Q8IW52 837 aa12.98□□□□□ -0.33
VRK3-203ENST00000424804 CCDC170Q8IYT3 715 aa12.98□□□□□ -0.33
VRK3-203ENST00000424804 ARL14Q8N4G2 192 aa12.98□□□□□ -0.33
VRK3-203ENST00000424804 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.98□□□□□ -0.33
VRK3-203ENST00000424804 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.98□□□□□ -0.33
VRK3-203ENST00000424804 GFM1Q96RP9 751 aaKnown RBP12.98□□□□□ -0.33
VRK3-203ENST00000424804 SPATS2LQ9NUQ6 558 aaKnown RBP12.98□□□□□ -0.33
VRK3-203ENST00000424804 B4GALT6Q9UBX8 382 aa12.98□□□□□ -0.33
VRK3-203ENST00000424804 INTUQ9ULD6 942 aa12.98□□□□□ -0.33
VRK3-203ENST00000424804 ATXN7L1Q9ULK2 861 aaPredicted RBP12.98□□□□□ -0.33
VRK3-203ENST00000424804 RNF215Q9Y6U7 377 aa12.98□□□□□ -0.33
VRK3-203ENST00000424804 BOD1L1Q8NFC6 3051 aa12.98□□□□□ -0.33
VRK3-203ENST00000424804 MYO18BQ8IUG5 2567 aa12.97□□□□□ -0.33
VRK3-203ENST00000424804 GOLGA6L6A8MZA4 724 aa12.97□□□□□ -0.33
VRK3-203ENST00000424804 MFSD11O43934 449 aa12.97□□□□□ -0.33
VRK3-203ENST00000424804 MAFKO60675 156 aa12.97□□□□□ -0.33
VRK3-203ENST00000424804 NDUFA10O95299 355 aa12.97□□□□□ -0.33
VRK3-203ENST00000424804 CEACAM5P06731 702 aa12.97□□□□□ -0.33
VRK3-203ENST00000424804 PNLIPP16233 465 aa12.97□□□□□ -0.33
VRK3-203ENST00000424804 GLB1P16278 677 aa12.97□□□□□ -0.33
VRK3-203ENST00000424804 LHCGRP22888 699 aa12.97□□□□□ -0.33
VRK3-203ENST00000424804 KDELR1P24390 212 aa12.97□□□□□ -0.33
VRK3-203ENST00000424804 IL4RP24394 825 aa12.97□□□□□ -0.33
VRK3-203ENST00000424804 SCNN1BP51168 640 aa12.97□□□□□ -0.33
VRK3-203ENST00000424804 INHBCP55103 352 aa12.97□□□□□ -0.33
VRK3-203ENST00000424804 ITKQ08881 620 aa12.97□□□□□ -0.33
VRK3-203ENST00000424804 CNGA3Q16281 694 aa12.97□□□□□ -0.33
VRK3-203ENST00000424804 LINC00303Q3SY05 128 aa12.97□□□□□ -0.33
VRK3-203ENST00000424804 TMCO4Q5TGY1 634 aa12.97□□□□□ -0.33
VRK3-203ENST00000424804 ZNF574Q6ZN55 896 aaPredicted RBP12.97□□□□□ -0.33
VRK3-203ENST00000424804 SPRED1Q7Z699 444 aa12.97□□□□□ -0.33
VRK3-203ENST00000424804 CCNJLQ8IV13 435 aa12.97□□□□□ -0.33
VRK3-203ENST00000424804 BBS5Q8N3I7 341 aa12.97□□□□□ -0.33
VRK3-203ENST00000424804 FBXO39Q8N4B4 442 aa12.97□□□□□ -0.33
VRK3-203ENST00000424804 EXD3Q8N9H8 876 aa12.97□□□□□ -0.33
VRK3-203ENST00000424804 GPBAR1Q8TDU6 330 aa12.97□□□□□ -0.33
VRK3-203ENST00000424804 LRRN4Q8WUT4 740 aa12.97□□□□□ -0.33
VRK3-203ENST00000424804 SCG3Q8WXD2 468 aaKnown RBP12.97□□□□□ -0.33
VRK3-203ENST00000424804 RAPGEF5Q92565 580 aa12.97□□□□□ -0.33
VRK3-203ENST00000424804 RNF25Q96BH1 459 aaPredicted RBP12.97□□□□□ -0.33
VRK3-203ENST00000424804 BAG1Q99933 345 aaPredicted RBP12.97□□□□□ -0.33
VRK3-203ENST00000424804 ZNF670Q9BS34 389 aa12.97□□□□□ -0.33
VRK3-203ENST00000424804 MAK16Q9BXY0 300 aaKnown RBP12.97□□□□□ -0.33
VRK3-203ENST00000424804 TEX101Q9BY14 249 aa12.97□□□□□ -0.33
VRK3-203ENST00000424804 GOLPH3Q9H4A6 298 aa12.97□□□□□ -0.33
VRK3-203ENST00000424804 EPB41L5Q9HCM4 733 aa12.97□□□□□ -0.33
VRK3-203ENST00000424804 RCOR3Q9P2K3 495 aaPredicted RBP12.97□□□□□ -0.33
VRK3-203ENST00000424804 DOLKQ9UPQ8 538 aa12.97□□□□□ -0.33
VRK3-203ENST00000424804 PCDHGC4Q9Y5F7 938 aa12.97□□□□□ -0.33
VRK3-203ENST00000424804 EPN1Q9Y6I3 576 aaPredicted RBP12.97□□□□□ -0.33
VRK3-203ENST00000424804 TLN1Q9Y490 2541 aaKnown RBP12.96□□□□□ -0.33
VRK3-203ENST00000424804 SDK2Q58EX2 2172 aa12.96□□□□□ -0.33
VRK3-203ENST00000424804 A0A0U1RQS6 177 aa12.96□□□□□ -0.33
VRK3-203ENST00000424804 MTA2O94776 668 aa12.96□□□□□ -0.33
VRK3-203ENST00000424804 FGF1P05230 155 aa12.96□□□□□ -0.33
VRK3-203ENST00000424804 ELFN1P0C7U0 828 aa12.96□□□□□ -0.33
VRK3-203ENST00000424804 KRT10P13645 584 aa12.96□□□□□ -0.33
VRK3-203ENST00000424804 WT1P19544 449 aaPredicted RBP12.96□□□□□ -0.33
VRK3-203ENST00000424804 ITIH1P19827 911 aa12.96□□□□□ -0.33
VRK3-203ENST00000424804 COMTP21964 271 aa12.96□□□□□ -0.33
VRK3-203ENST00000424804 ARSEP51690 589 aa12.96□□□□□ -0.33
VRK3-203ENST00000424804 AP1S1P61966 158 aa12.96□□□□□ -0.33
VRK3-203ENST00000424804 DYNLT1P63172 113 aa12.96□□□□□ -0.33
VRK3-203ENST00000424804 TRAF2Q12933 501 aa12.96□□□□□ -0.33
VRK3-203ENST00000424804 EIF3IQ13347 325 aaKnown RBP12.96□□□□□ -0.33
VRK3-203ENST00000424804 LLGL1Q15334 1064 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms