RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 METTL18O95568 372 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 PSMA1P25786 263 aaKnown RBP12.35□□□□□ -0.43
CLCN4-203ENST00000421085 AQP1P29972 269 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 IDH3AP50213 366 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 MAXP61244 160 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 LIPEQ05469 1076 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 USP45Q70EL2 814 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 BTN2A1Q7KYR7 527 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 SKA1Q96BD8 255 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 TEFMQ96QE5 360 aaKnown RBP12.35□□□□□ -0.43
CLCN4-203ENST00000421085 UNC93B1Q9H1C4 597 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 MROH8Q9H579 483 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 GSAPA4D1B5 854 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 STX16-NPEPL1H3BU86 382 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 STX16O14662 325 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 HIST1H2ABP04908 130 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 BUD31P41223 144 aaPredicted RBP12.35□□□□□ -0.43
CLCN4-203ENST00000421085 SETMARQ53H47 684 aaPredicted RBP12.35□□□□□ -0.43
CLCN4-203ENST00000421085 METTL21CQ5VZV1 264 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 FAM43BQ6ZT52 329 aaPredicted RBP12.35□□□□□ -0.43
CLCN4-203ENST00000421085 HIST3H2AQ7L7L0 130 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 UNC93AQ86WB7 457 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 FAM156AQ8NDB6 213 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 HIST1H2ACQ93077 130 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 P2RY11Q96G91 374 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 RSPH9Q9H1X1 276 aaPredicted RBP12.35□□□□□ -0.43
CLCN4-203ENST00000421085 TTYH1Q9H313 450 aaPredicted RBP12.35□□□□□ -0.43
CLCN4-203ENST00000421085 AKAP7Q9P0M2 348 aaPredicted RBP12.35□□□□□ -0.43
CLCN4-203ENST00000421085 POMPQ9Y244 141 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 H0Y858 1186 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 MDM4O15151 490 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 IPO13O94829 963 aaKnown RBP12.34□□□□□ -0.43
CLCN4-203ENST00000421085 TNFSF9P41273 254 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 HLA-DQA1Q5Y7H0 255 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 RAP1GAP2Q684P5 730 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 KLHDC10Q6PID8 442 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 RD3Q7Z3Z2 195 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 JOSD2Q8TAC2 188 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 CPT1BQ92523 772 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 GLT1D1Q96MS3 346 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 TUBGCP5Q96RT8 1024 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 MARCH7Q9H992 704 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 PDE10AQ9Y233 779 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 CARD8Q9Y2G2 431 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 TSPOAP1O95153 1857 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 DHX15O43143 795 aaKnown RBP12.34□□□□□ -0.43
CLCN4-203ENST00000421085 ALDH2P05091 517 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 CYP2C18P33260 490 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 ELP6Q0PNE2 266 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 STYK1Q6J9G0 422 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 RPTNQ6XPR3 784 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 SLC4A9Q96Q91 983 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 PURBQ96QR8 312 aaKnown RBP12.34□□□□□ -0.43
CLCN4-203ENST00000421085 MUC13Q9H3R2 512 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 PEX16Q9Y5Y5 336 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 NDUFS2O75306 463 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 H6PDO95479 791 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 RPL3P39023 403 aaKnown RBP12.34□□□□□ -0.43
CLCN4-203ENST00000421085 MARSP56192 900 aaKnown RBP12.34□□□□□ -0.43
CLCN4-203ENST00000421085 RBBP4Q09028 425 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 NOMO1Q15155 1222 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 TSC22D1Q15714 1073 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 ANXA8L1Q5VT79 327 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 SLC9A4Q6AI14 798 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 R3HCC1LQ7Z5L2 792 aaKnown RBP12.34□□□□□ -0.43
CLCN4-203ENST00000421085 OR8H3Q8N146 312 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 OR4L1Q8NH43 312 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 SEMA3CQ99985 751 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 OAS3Q9Y6K5 1087 aaKnown RBP12.34□□□□□ -0.43
CLCN4-203ENST00000421085 SERPINB7O75635 380 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 CREB1P16220 341 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 HOXB6P17509 224 aaKnown RBP12.34□□□□□ -0.43
CLCN4-203ENST00000421085 TUBA4AP68366 448 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 ECM1Q16610 540 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 LSM12Q3MHD2 195 aaKnown RBP12.34□□□□□ -0.43
CLCN4-203ENST00000421085 ZNF613Q6PF04 617 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 CNSTQ6PJW8 725 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 ATL1Q8WXF7 558 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 UBE2E3Q969T4 207 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 ALG2Q9H553 416 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 TGFB1I1O43294 461 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 URODP06132 367 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 SERPINA4P29622 427 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 FAUP35544 74 aaKnown RBP12.34□□□□□ -0.43
CLCN4-203ENST00000421085 ARL13AQ5H913 290 aaPredicted RBP12.34□□□□□ -0.43
CLCN4-203ENST00000421085 RNF180Q86T96 592 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 OR5B17Q8NGF7 314 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 TWIST2Q8WVJ9 160 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 AASDHPPTQ9NRN7 309 aa12.34□□□□□ -0.43
CLCN4-203ENST00000421085 IFT80Q9P2H3 777 aaPredicted RBP12.34□□□□□ -0.43
CLCN4-203ENST00000421085 IRGMA1A4Y4 181 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 PGRP06401 933 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 ZNF157P51786 506 aaPredicted RBP12.33□□□□□ -0.44
CLCN4-203ENST00000421085 MXD1Q05195 221 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 ZNF781Q8N8C0 355 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 ZFP28Q8NHY6 868 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 PNPT1Q8TCS8 783 aaKnown RBP12.33□□□□□ -0.44
CLCN4-203ENST00000421085 RAB2BQ8WUD1 216 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 HSFY1Q96LI6 401 aa12.33□□□□□ -0.44
CLCN4-203ENST00000421085 ZNF607Q96SK3 696 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms