RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 PTSQ03393 145 aa14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 STARD3Q14849 445 aa14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 TYSND1Q2T9J0 566 aa14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 EOGTQ5NDL2 527 aa14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 MRNIPQ6NTE8 343 aa14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 ERAP2Q6P179 960 aa14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 CES3Q6UWW8 571 aa14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 PACS1Q6VY07 963 aa14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 CAPN12Q6ZSI9 719 aa14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 TAOK1Q7L7X3 1001 aa14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 LYSMD3Q7Z3D4 306 aa14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 CYP2U1Q7Z449 544 aa14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 CILP2Q8IUL8 1156 aa14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 PPM1NQ8N819 430 aa14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 OR4K2Q8NGD2 314 aa14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 OR4L1Q8NH43 312 aa14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 HDAC10Q969S8 669 aa14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 DNAJC1Q96KC8 554 aaKnown RBP14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 OSBPL6Q9BZF3 934 aa14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 GPR63Q9BZJ6 419 aa14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 MTG2Q9H4K7 406 aa14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 INTS10Q9NVR2 710 aaKnown RBP14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 KCTD5Q9NXV2 234 aa14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 OGFRQ9NZT2 677 aa14.25□□□□□ -0.13
SHMT1P1-201ENST00000419974 PIEZO1Q92508 2521 aa14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 C1orf232A0A0U1RR37 186 aa14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 POC1B-GALNT4F8VUJ3 575 aa14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 H3BQF6 201 aa14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 BNIP3LO60238 219 aa14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 PRKCGP05129 697 aa14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 SNRPAP09012 282 aaKnown RBP14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 ALPIP09923 528 aa14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 CHRNB1P11230 501 aa14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 LHCGRP22888 699 aa14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 SPRP35270 261 aaPredicted RBP14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 CSRP3P50461 194 aa14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 CLCN5P51795 746 aa14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 NEK3P51956 506 aa14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 LIMK2P53671 638 aa14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 SATB1Q01826 763 aa14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 SFSWAPQ12872 951 aaKnown RBP14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 THOC5Q13769 683 aaKnown RBP14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 GPR33Q49SQ1 333 aa14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 TMEM52BQ4KMG9 183 aa14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 TTMPQ5BVD1 217 aa14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 AARS2Q5JTZ9 985 aaKnown RBP14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 IER5LQ5T953 404 aa14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 CERS6Q6ZMG9 384 aa14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 ERN2Q76MJ5 926 aaKnown RBP14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 PARS2Q7L3T8 475 aaKnown RBP14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 TTC7BQ86TV6 843 aa14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 TRABD2AQ86V40 505 aa14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 RASSF3Q86WH2 238 aa14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 NRSN1Q8IZ57 195 aa14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 UNC5BQ8IZJ1 945 aa14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 OR13C4Q8NGS5 318 aa14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 ARL8AQ96BM9 186 aa14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 TBATAQ96M53 351 aa14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 RBBP8Q99708 897 aa14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 PCDH12Q9NPG4 1184 aa14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 PPANQ9NQ55 473 aaKnown RBP14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 B4GALT6Q9UBX8 382 aa14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 GGT7Q9UJ14 662 aa14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 MMP17Q9ULZ9 603 aa14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 VPS9D1Q9Y2B5 631 aa14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 KCTD3Q9Y597 815 aa14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 MIA3Q5JRA6 1907 aa14.24□□□□□ -0.13
SHMT1P1-201ENST00000419974 TRBV5-4A0A0C4DH59 114 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 TLDC2A0PJX2 215 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 HMX2A2RU54 273 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 CCDC162PA2VCL2 907 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 GOT2P00505 430 aaKnown RBP14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 PIRTP0C851 137 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 ADRB3P13945 408 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 CTPS1P17812 591 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 CD9P21926 228 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 FOXN2P32314 431 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 TIE1P35590 1138 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 SPINT3P49223 89 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 FAM193AP78312 1265 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 NHLH1Q02575 133 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 RALGDSQ12967 914 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 PEX6Q13608 980 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 EFTUD2Q15029 972 aaKnown RBP eCLIP14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 AGERQ15109 404 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 CST6Q15828 149 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 C2orf27AQ580R0 203 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 RNF187Q5TA31 235 aaPredicted RBP14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 LYPLAL1Q5VWZ2 237 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 LRRC66Q68CR7 880 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 ZNF776Q68DI1 518 aaPredicted RBP14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 SH2D5Q6ZV89 423 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 USP30Q70CQ3 517 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 ZNF765Q7L2R6 523 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 CCDC91Q7Z6B0 441 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 SDCCAG8Q86SQ7 713 aaPredicted RBP14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 CTAGE3PQ8IX95 158 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 CYP4X1Q8N118 509 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 ZNF366Q8N895 744 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 ACMSDQ8TDX5 336 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms