RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 WDR18Q9BV38 432 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 PAIP1Q9H074 479 aaKnown RBP11.22□□□□□ -0.61
PTCH1-205ENST00000418258 ACTL7BQ9Y614 415 aa11.22□□□□□ -0.61
PTCH1-205ENST00000418258 DISP2A7MBM2 1401 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 PSMD10O75832 226 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 CASP9P55211 416 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 GTF2BQ00403 316 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 ELP6Q0PNE2 266 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 BRMS1LQ5PSV4 323 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 IRGCQ6NXR0 463 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 CAMK1DQ8IU85 385 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 TNS4Q8IZW8 715 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 EPS8L1Q8TE68 723 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 HERVK_113Q902F9 699 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 MKL1Q969V6 931 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 SLC35C1Q96A29 364 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 PRDM8Q9NQV8 689 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 TAS2R14Q9NYV8 317 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 CKLFQ9UBR5 152 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 BTBD3Q9Y2F9 522 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 CLDN4O14493 209 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 PRODHO43272 600 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 CST1P01037 141 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 SAGP10523 405 aaPredicted RBP11.21□□□□□ -0.61
PTCH1-205ENST00000418258 CDH3P22223 829 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 CBX5P45973 191 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 TNK2Q07912 1038 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 CBFBQ13951 182 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 TMEM161BQ8NDZ6 487 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 PIGKQ92643 395 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 KAZALD1Q96I82 304 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 TBC1D30Q9Y2I9 924 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 TREHO43280 583 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 SSNA1O43805 119 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 SEMA5AQ13591 1074 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 RFX4Q33E94 735 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 SLC25A52Q3SY17 297 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 PYDC2Q56P42 97 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 LIPMQ5VYY2 423 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 ZFRQ96KR1 1074 aaKnown RBP11.21□□□□□ -0.61
PTCH1-205ENST00000418258 IL12RB2Q99665 862 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 AGO3Q9H9G7 860 aaKnown RBP11.21□□□□□ -0.61
PTCH1-205ENST00000418258 CAB39LQ9H9S4 337 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 SIRPGQ9P1W8 387 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 CD84Q9UIB8 345 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 PTCH2Q9Y6C5 1203 aa11.21□□□□□ -0.61
PTCH1-205ENST00000418258 PER2O15055 1255 aa11.21□□□□□ -0.62
PTCH1-205ENST00000418258 MFN2O95140 757 aa11.21□□□□□ -0.62
PTCH1-205ENST00000418258 IL12BP29460 328 aa11.21□□□□□ -0.62
PTCH1-205ENST00000418258 MZT2BQ6NZ67 158 aa11.21□□□□□ -0.62
PTCH1-205ENST00000418258 RHBDF2Q6PJF5 856 aa11.21□□□□□ -0.62
PTCH1-205ENST00000418258 PMEPA1Q969W9 287 aa11.21□□□□□ -0.62
PTCH1-205ENST00000418258 CCDC88AQ3V6T2 1871 aa11.21□□□□□ -0.62
PTCH1-205ENST00000418258 DCCP43146 1447 aa11.21□□□□□ -0.62
PTCH1-205ENST00000418258 LRRC72A6NJI9 287 aa11.21□□□□□ -0.62
PTCH1-205ENST00000418258 PLSCR1O15162 318 aa11.21□□□□□ -0.62
PTCH1-205ENST00000418258 TP73O15350 636 aa11.21□□□□□ -0.62
PTCH1-205ENST00000418258 PAPSS1O43252 624 aaPredicted RBP11.21□□□□□ -0.62
PTCH1-205ENST00000418258 UGT2B17O75795 530 aa11.21□□□□□ -0.62
PTCH1-205ENST00000418258 ERCC2P18074 760 aa11.21□□□□□ -0.62
PTCH1-205ENST00000418258 ITPKAP23677 461 aa11.21□□□□□ -0.62
PTCH1-205ENST00000418258 MAT2AP31153 395 aaKnown RBP11.21□□□□□ -0.62
PTCH1-205ENST00000418258 STXBP1P61764 594 aaKnown RBP11.21□□□□□ -0.62
PTCH1-205ENST00000418258 ZNF155Q12901 538 aaPredicted RBP11.21□□□□□ -0.62
PTCH1-205ENST00000418258 TUSC3Q13454 348 aa11.21□□□□□ -0.62
PTCH1-205ENST00000418258 ATP13A5Q4VNC0 1218 aa11.21□□□□□ -0.62
PTCH1-205ENST00000418258 ZNF730Q6ZMV8 503 aa11.21□□□□□ -0.62
PTCH1-205ENST00000418258 ANKS1BQ7Z6G8 1248 aa11.21□□□□□ -0.62
PTCH1-205ENST00000418258 ATCAYQ86WG3 371 aa11.21□□□□□ -0.62
PTCH1-205ENST00000418258 HDDC3Q8N4P3 179 aa11.21□□□□□ -0.62
PTCH1-205ENST00000418258 NETO2Q8NC67 525 aa11.21□□□□□ -0.62
PTCH1-205ENST00000418258 PTCD2Q8WV60 388 aaKnown RBP11.21□□□□□ -0.62
PTCH1-205ENST00000418258 KCNK4Q9NYG8 393 aa11.21□□□□□ -0.62
PTCH1-205ENST00000418258 SAMHD1Q9Y3Z3 626 aaKnown RBP11.21□□□□□ -0.62
PTCH1-205ENST00000418258 KPNA4O00629 521 aaPredicted RBP11.21□□□□□ -0.62
PTCH1-205ENST00000418258 GPR180Q86V85 440 aa11.21□□□□□ -0.62
PTCH1-205ENST00000418258 APLFQ8IW19 511 aaPredicted RBP11.21□□□□□ -0.62
PTCH1-205ENST00000418258 DEPDC4Q8N2C3 294 aa11.21□□□□□ -0.62
PTCH1-205ENST00000418258 SUN3Q8TAQ9 357 aa11.21□□□□□ -0.62
PTCH1-205ENST00000418258 ANKRD7Q92527 254 aa11.21□□□□□ -0.62
PTCH1-205ENST00000418258 TIFAQ96CG3 184 aa11.21□□□□□ -0.62
PTCH1-205ENST00000418258 FAM163AQ96GL9 167 aaPredicted RBP11.21□□□□□ -0.62
PTCH1-205ENST00000418258 MCCC2Q9HCC0 563 aa11.21□□□□□ -0.62
PTCH1-205ENST00000418258 GLYATL1P3A0A0U1RQE8 302 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 TAF4O00268 1085 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 TPD52L2O43399 206 aaKnown RBP11.2□□□□□ -0.62
PTCH1-205ENST00000418258 CLDN11O75508 207 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 C22orf31O95567 290 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 SCRN3Q0VDG4 424 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 KCTD4Q8WVF5 259 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 CAPNS2Q96L46 248 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 GOLGA2P5Q9HBQ8 144 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 POLMQ9NP87 494 aaPredicted RBP11.2□□□□□ -0.62
PTCH1-205ENST00000418258 MARK1Q9P0L2 795 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 ARHGAP23Q9P227 1491 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 SLC31A1O15431 190 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 LIASO43766 372 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 ALADP13716 330 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 CMPK1P30085 196 aa11.2□□□□□ -0.62
PTCH1-205ENST00000418258 PTPN5P54829 565 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms