RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 CEP76Q8TAP6 659 aa13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 PDCD6IPQ8WUM4 868 aaKnown RBP13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 ERLEC1Q96DZ1 483 aa13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 SLC2A11Q9BYW1 496 aa13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 CAPN10Q9HC96 672 aa13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 KCNK9Q9NPC2 374 aa13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 CHRAC1Q9NRG0 131 aa13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 MARK1Q9P0L2 795 aa13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 TXNDC16Q9P2K2 825 aa13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 DEC1Q9P2X7 70 aa13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 LHX3Q9UBR4 397 aa13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 HCN2Q9UL51 889 aa13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 ADAMTS9Q9P2N4 1935 aa13.22□□□□□ -0.29
HLA-DMB-258ENST00000418107 HEATR9A2RTY3 570 aa13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 TAF4O00268 1085 aa13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 HOXC11O43248 304 aaPredicted RBP13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 NDST3O95803 873 aa13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 IGSF6O95976 241 aa13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 MT-CO1P00395 513 aa13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 HOXB2P14652 356 aa13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 PAMP19021 973 aa13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 PRKCHP24723 683 aa13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 HLA-FP30511 346 aa13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 RGRP47804 291 aa13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 PPARDQ03181 441 aa13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 NSUN2Q08J23 767 aaKnown RBP eCLIP13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 MGAT5Q09328 741 aa13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 LAMB3Q13751 1172 aa13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 GALNT3Q14435 633 aa13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 SMAD1Q15797 465 aaKnown RBP13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 ATXN7L2Q5T6C5 722 aaPredicted RBP13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 ADGRD1Q6QNK2 874 aa13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 SLC36A4Q6YBV0 504 aa13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 TRMT11Q7Z4G4 463 aaKnown RBP13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 SLC26A11Q86WA9 606 aa13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 SRRM1Q8IYB3 904 aaKnown RBP13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 TERB1Q8NA31 727 aa13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 PTCD2Q8WV60 388 aaKnown RBP13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 SLC44A1Q8WWI5 657 aa13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 TTC17Q96AE7 1141 aa13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 CERS2Q96G23 380 aa13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 FCRL3Q96P31 734 aaPredicted RBP13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 KIFC1Q9BW19 673 aa13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 TM6SF2Q9BZW4 377 aa13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 ARNT2Q9HBZ2 717 aa13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 C20orf96Q9NUD7 363 aaPredicted RBP13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 ZFATQ9P243 1243 aa13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 CHKBQ9Y259 395 aa13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 TCAF1Q9Y4C2 921 aa13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 RAI2Q9Y5P3 530 aa13.21□□□□□ -0.29
HLA-DMB-258ENST00000418107 PCDH15Q96QU1 1955 aa13.21□□□□□ -0.3
HLA-DMB-258ENST00000418107 IGHV1OR15-9A0A0B4J2B8 117 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 LOC285095A0A1B0GVY8 99 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 FAM159BA6NKW6 160 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 CXorf49A8MYA2 514 aaPredicted RBP13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 K7ERQ8 282 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 ARHGAP33O14559 1287 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 SMAD6O43541 496 aaKnown RBP13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 BNIP3LO60238 219 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 TRIM16O95361 564 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 CD160O95971 181 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 EPOP01588 193 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 MT-ND3P03897 115 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 ERVK-10P10266 1014 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 CD59P13987 128 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 NMBRP28336 390 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 GCAP28676 217 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 NNMTP40261 264 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 CTSOP43234 321 aaPredicted RBP13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 SERPINB9P50453 376 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 EPHB1P54762 984 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 AP1S1P61966 158 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 SNRPD1P62314 119 aaKnown RBP13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 ECT2LQ008S8 904 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 NAB1Q13506 487 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 FUT11Q495W5 492 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 RALGPS1Q5JS13 557 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 EGFLAMQ63HQ2 1017 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 MBLAC2Q68D91 279 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 NCEH1Q6PIU2 408 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 KDM7AQ6ZMT4 941 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 CYS1Q717R9 158 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 SLC41A1Q8IVJ1 513 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 UNC5BQ8IZJ1 945 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 CYP4X1Q8N118 509 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 BLOC1S5Q8TDH9 187 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 KCNV2Q8TDN2 545 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 DCAKDQ8WVC6 231 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 TADA1Q96BN2 335 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 RPL10LQ96L21 214 aaKnown RBP13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 HSPA12BQ96MM6 686 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 ADGRE3Q9BY15 652 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 TRABDQ9H4I3 376 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 MRM3Q9HC36 420 aaKnown RBP13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 MOCS1Q9NZB8 636 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 ADAM21Q9UKJ8 722 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 INTS6Q9UL03 887 aaKnown RBP13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 CYP8B1Q9UNU6 501 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 PCDHGC4Q9Y5F7 938 aa13.2□□□□□ -0.3
HLA-DMB-258ENST00000418107 NBEAQ8NFP9 2946 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms