RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 PPP2CAP67775 309 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 RALGDSQ12967 914 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 LRRC14Q15048 493 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 PTPRRQ15256 657 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 ERCC6LQ2NKX8 1250 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 MAP9Q49MG5 647 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 ZRANB3Q5FWF4 1079 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 HP1BP3Q5SSJ5 553 aaPredicted RBP8.46□□□□□ -1.06
TRIM48-201ENST00000417545 TSTD2Q5T7W7 516 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 LYSMD4Q5XG99 296 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 SEL1L3Q68CR1 1132 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 DENND5AQ6IQ26 1287 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 CAPN12Q6ZSI9 719 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 CCNJLQ8IV13 435 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 ANKMY2Q8IV38 441 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 FRMD1Q8N878 549 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 CADM4Q8NFZ8 388 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 OR4K2Q8NGD2 314 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 OR6P1Q8NGX9 317 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 GDAP1Q8TB36 358 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 PYROXD1Q8WU10 500 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 STYXQ8WUJ0 223 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 PTCD2Q8WV60 388 aaKnown RBP8.46□□□□□ -1.06
TRIM48-201ENST00000417545 SKA1Q96BD8 255 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 AP2M1Q96CW1 435 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 LRRC39Q96DD0 335 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 SERAC1Q96JX3 654 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 RANBP9Q96S59 729 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 LYSMD1Q96S90 227 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 TTC1Q99614 292 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 SLC17A9Q9BYT1 436 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 FAM83DQ9H4H8 585 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 C11orf16Q9NQ32 467 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 PPANQ9NQ55 473 aaKnown RBP8.46□□□□□ -1.06
TRIM48-201ENST00000417545 GRHL1Q9NZI5 618 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 APPL1Q9UKG1 709 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 NFU1Q9UMS0 254 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 SOX13Q9UN79 622 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 TCAF1Q9Y4C2 921 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 SCN8AQ9UQD0 1980 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 TRPM6Q9BX84 2022 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 GLYATL1P3A0A0U1RQE8 302 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 A0A0U1RQS6 177 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 RGSL1A5PLK6 1076 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 PRAMEF26H0Y7S4 382 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 PFDN6O15212 129 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 ERLIN1O75477 346 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 BANF1O75531 89 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 TTC4O95801 387 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 PAK4O96013 591 aaPredicted RBP8.45□□□□□ -1.06
TRIM48-201ENST00000417545 PYGLP06737 847 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 TUBBP07437 444 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 GNSP15586 552 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 ITGALP20701 1170 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 BCKDHBP21953 392 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 HNRNPA2B1P22626 353 aaKnown RBP8.45□□□□□ -1.06
TRIM48-201ENST00000417545 PHBP35232 272 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 HMGCLP35914 325 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 PPARGP37231 505 aaPredicted RBP8.45□□□□□ -1.06
TRIM48-201ENST00000417545 ELK3P41970 407 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 GPR1P46091 355 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 SPINT3P49223 89 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 SRSF5Q13243 272 aaKnown RBP8.45□□□□□ -1.06
TRIM48-201ENST00000417545 THOC5Q13769 683 aaKnown RBP8.45□□□□□ -1.06
TRIM48-201ENST00000417545 ITGA9Q13797 1035 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 STAT4Q14765 748 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 FNBP1LQ5T0N5 605 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 ARMC3Q5W041 872 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 FAM151BQ6UXP7 276 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 Q6ZVL8 140 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 ZNF534Q76KX8 674 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 TAS2R42Q7RTR8 314 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 CYP2U1Q7Z449 544 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 HSD11B1LQ7Z5J1 315 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 PTAR1Q7Z6K3 402 aaPredicted RBP8.45□□□□□ -1.06
TRIM48-201ENST00000417545 CAND1Q86VP6 1230 aaKnown RBP8.45□□□□□ -1.06
TRIM48-201ENST00000417545 NRSN1Q8IZ57 195 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 MAML2Q8IZL2 1156 aaPredicted RBP8.45□□□□□ -1.06
TRIM48-201ENST00000417545 MPP5Q8N3R9 675 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 TTC30BQ8N4P2 665 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.45□□□□□ -1.06
TRIM48-201ENST00000417545 FBXO36Q8NEA4 188 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 OR13C4Q8NGS5 318 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 FAM131CQ96AQ9 280 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 BIRC7Q96CA5 298 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 DTD2Q96FN9 168 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 DNAJC1Q96KC8 554 aaKnown RBP8.45□□□□□ -1.06
TRIM48-201ENST00000417545 CDH19Q9H159 772 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 VPS37BQ9H9H4 285 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 MRM3Q9HC36 420 aaKnown RBP8.45□□□□□ -1.06
TRIM48-201ENST00000417545 FZD3Q9NPG1 666 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 GDF3Q9NR23 364 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 CHRAC1Q9NRG0 131 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 ZC3H7BQ9UGR2 993 aaKnown RBP8.45□□□□□ -1.06
TRIM48-201ENST00000417545 SUSD2Q9UGT4 822 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 FKBPLQ9UIM3 349 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 MBD1Q9UIS9 605 aaPredicted RBP8.45□□□□□ -1.06
TRIM48-201ENST00000417545 CRLS1Q9UJA2 301 aa8.45□□□□□ -1.06
TRIM48-201ENST00000417545 ZFR2Q9UPR6 939 aaKnown RBP8.45□□□□□ -1.06
TRIM48-201ENST00000417545 DMTF1Q9Y222 760 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms