RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 OR13H1Q8NG92 308 aa17.51■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 NETO1Q8TDF5 533 aa17.51■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 EID2BQ96D98 161 aa17.51■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 NUS1Q96E22 293 aa17.51■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 TBL1YQ9BQ87 522 aa17.51■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 FICDQ9BVA6 458 aa17.51■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 TMEM9BQ9NQ34 198 aa17.51■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 RAD18Q9NS91 495 aa17.51■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 SMARCAL1Q9NZC9 954 aa17.51■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 PKD2L2Q9NZM6 624 aa17.51■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 ZNF711Q9Y462 761 aa17.51■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 LRRK1Q38SD2 2015 aa17.5■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.5■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 SPTY2D1-AS1A0A0U1RR47 76 aa17.5■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 TSHRP16473 764 aa17.5■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 PAFAH1B1P43034 410 aa17.5■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 CHRNA4P43681 627 aa17.5■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 SPINT3P49223 89 aa17.5■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 SLC14A1Q13336 389 aa17.5■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 PTK2BQ14289 1009 aa17.5■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 PNCKQ6P2M8 343 aa17.5■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 LAYNQ6UX15 382 aa17.5■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 SYT10Q6XYQ8 523 aa17.5■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 LYSMD3Q7Z3D4 306 aa17.5■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 MINDY1Q8N5J2 469 aa17.5■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 SLC25A41Q8N5S1 370 aa17.5■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 PDCD7Q8N8D1 485 aaKnown RBP17.5■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 DTX3LQ8TDB6 740 aa17.5■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 GRK7Q8WTQ7 553 aa17.5■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 SLCO2A1Q92959 643 aa17.5■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 ELF4Q99607 663 aaPredicted RBP17.5■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 MYOCQ99972 504 aa17.5■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 FSCN3Q9NQT6 498 aa17.5■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 NEU2Q9Y3R4 380 aa17.5■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 KNL1Q8NG31 2342 aa17.5■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 A0A0U1RQS6 177 aa17.49■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 YKT6O15498 198 aa17.49■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 GDF9O60383 454 aa17.49■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 ZSCAN5DPP0CG00 497 aa17.49■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 SDHBP21912 280 aa17.49■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 DCDC1P59894 354 aa17.49■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 INPP5AQ14642 412 aa17.49■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 ZDHHC20Q5W0Z9 365 aa17.49■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 DBX2Q6ZNG2 339 aa17.49■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 SLC22A18ASQ8N1D0 253 aa17.49■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 TTC30BQ8N4P2 665 aa17.49■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 BRSK1Q8TDC3 778 aa17.49■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 RUNDC3BQ96NL0 473 aa17.49■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 APOOQ9BUR5 198 aa17.49■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 GPR63Q9BZJ6 419 aa17.49■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 ABCG8Q9H221 673 aa17.49■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 GAREM1Q9H706 876 aa17.49■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 EIF2B3Q9NR50 452 aaKnown RBP17.49■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 RAB6BQ9NRW1 208 aa17.49■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 PCYOX1Q9UHG3 505 aa17.49■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 SHOC2Q9UQ13 582 aa17.49■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 PCDHGB2Q9Y5G2 931 aa17.49■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 SPO11Q9Y5K1 396 aa17.49■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 A0A1B0GTQ1 180 aa17.48■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 CCDC188H7C350 402 aa17.48■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 KIF2AO00139 706 aaPredicted RBP17.48■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 PPFIA2O75334 1257 aa17.48■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 PIRTP0C851 137 aa17.48■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 CDK16Q00536 496 aa17.48■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 HENMT1Q5T8I9 393 aaKnown RBP17.48■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 FAXCQ5TGI0 409 aa17.48■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 STPG1Q5TH74 334 aa17.48■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 DENND2CQ68D51 928 aa17.48■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 PTAR1Q7Z6K3 402 aaPredicted RBP17.48■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 PRUNE1Q86TP1 453 aa17.48■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 PLA2G15Q8NCC3 412 aa17.48■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 AP2M1Q96CW1 435 aa17.48■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 CAPZA3Q96KX2 299 aa17.48■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 GTPBP2Q9BX10 602 aaKnown RBP17.48■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 TEX101Q9BY14 249 aa17.48■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 FAM83DQ9H4H8 585 aa17.48■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.48■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 IL17CQ9P0M4 197 aa17.48■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 CFAP54Q96N23 3096 aa17.48■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.47■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 C4orf47A7E2U8 309 aa17.47■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 PDE2AO00408 941 aaPredicted RBP17.47■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 AURKAO14965 403 aa17.47■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 PCDHGA12O60330 932 aa17.47■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 KRT14P02533 472 aa17.47■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 PCCBP05166 539 aa17.47■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 MAGEA6P43360 314 aa17.47■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 ARRB1P49407 418 aaPredicted RBP17.47■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 KIAA1024LP59773 190 aa17.47■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 PDE1BQ01064 536 aa17.47■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 OLIG2Q13516 323 aa17.47■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 PDE1CQ14123 709 aaPredicted RBP17.47■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 FZD2Q14332 565 aa17.47■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 SPARCL1Q14515 664 aa17.47■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 NFATC4Q14934 902 aa17.47■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 TAF1AQ15573 450 aaPredicted RBP17.47■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 PDPK2PQ6A1A2 396 aa17.47■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 ADAMTSL4Q6UY14 1074 aa17.47■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 MACC1Q6ZN28 852 aa17.47■□□□□ 0.39
COMMD3-BMI1-201ENST00000417470 RFLNAQ6ZTI6 216 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms