RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 OR6C4Q8NGE1 309 aa17.85■□□□□ 0.45
CPNE1-210ENST00000416778 GPBAR1Q8TDU6 330 aa17.85■□□□□ 0.45
CPNE1-210ENST00000416778 CCDC74AQ96AQ1 378 aa17.85■□□□□ 0.45
CPNE1-210ENST00000416778 SLC46A1Q96NT5 459 aa17.85■□□□□ 0.45
CPNE1-210ENST00000416778 FRMD8Q9BZ67 464 aaPredicted RBP17.85■□□□□ 0.45
CPNE1-210ENST00000416778 ABCG8Q9H221 673 aa17.85■□□□□ 0.45
CPNE1-210ENST00000416778 ASCL3Q9NQ33 180 aa17.85■□□□□ 0.45
CPNE1-210ENST00000416778 PHPT1Q9NRX4 125 aaPredicted RBP17.85■□□□□ 0.45
CPNE1-210ENST00000416778 CHKBQ9Y259 395 aa17.85■□□□□ 0.45
CPNE1-210ENST00000416778 ANKRD36A6QL64 1941 aa17.84■□□□□ 0.45
CPNE1-210ENST00000416778 LOC400499M0QZD8 3231 aa17.84■□□□□ 0.45
CPNE1-210ENST00000416778 A0A1W2PQM1 296 aa17.84■□□□□ 0.45
CPNE1-210ENST00000416778 PRSS38A1L453 326 aa17.84■□□□□ 0.45
CPNE1-210ENST00000416778 ZNF487B1APH4 448 aa17.84■□□□□ 0.45
CPNE1-210ENST00000416778 HLA-DQB2P05538 268 aa17.84■□□□□ 0.45
CPNE1-210ENST00000416778 TPM1P09493 284 aa17.84■□□□□ 0.45
CPNE1-210ENST00000416778 KRT10P13645 584 aa17.84■□□□□ 0.45
CPNE1-210ENST00000416778 ABCG1P45844 678 aa17.84■□□□□ 0.45
CPNE1-210ENST00000416778 PDX1P52945 283 aa17.84■□□□□ 0.45
CPNE1-210ENST00000416778 CDK3Q00526 305 aa17.84■□□□□ 0.45
CPNE1-210ENST00000416778 CCDC13Q8IYE1 715 aa17.84■□□□□ 0.45
CPNE1-210ENST00000416778 PLD5Q8N7P1 536 aa17.84■□□□□ 0.45
CPNE1-210ENST00000416778 CNTD1Q8N815 330 aa17.84■□□□□ 0.45
CPNE1-210ENST00000416778 PTCD2Q8WV60 388 aaKnown RBP17.84■□□□□ 0.45
CPNE1-210ENST00000416778 HDAC11Q96DB2 347 aa17.84■□□□□ 0.45
CPNE1-210ENST00000416778 LGMNQ99538 433 aa17.84■□□□□ 0.45
CPNE1-210ENST00000416778 PRORYQ9H606 182 aa17.84■□□□□ 0.45
CPNE1-210ENST00000416778 SPATS2LQ9NUQ6 558 aaKnown RBP17.84■□□□□ 0.45
CPNE1-210ENST00000416778 MOSPD1Q9UJG1 213 aa17.84■□□□□ 0.45
CPNE1-210ENST00000416778 APPL1Q9UKG1 709 aa17.84■□□□□ 0.45
CPNE1-210ENST00000416778 SATB2Q9UPW6 733 aa17.84■□□□□ 0.45
CPNE1-210ENST00000416778 SLC17A4Q9Y2C5 497 aa17.84■□□□□ 0.45
CPNE1-210ENST00000416778 ATRXP46100 2492 aa17.83■□□□□ 0.45
CPNE1-210ENST00000416778 LRRD1A4D1F6 860 aa17.83■□□□□ 0.44
CPNE1-210ENST00000416778 SOD1P00441 154 aa17.83■□□□□ 0.44
CPNE1-210ENST00000416778 FGF1P05230 155 aa17.83■□□□□ 0.44
CPNE1-210ENST00000416778 MMP2P08253 660 aa17.83■□□□□ 0.44
CPNE1-210ENST00000416778 PNLIPP16233 465 aa17.83■□□□□ 0.44
CPNE1-210ENST00000416778 GLB1P16278 677 aa17.83■□□□□ 0.44
CPNE1-210ENST00000416778 POLD2P49005 469 aa17.83■□□□□ 0.44
CPNE1-210ENST00000416778 RPL26P61254 145 aaKnown RBP17.83■□□□□ 0.44
CPNE1-210ENST00000416778 PPIDQ08752 370 aaKnown RBP17.83■□□□□ 0.44
CPNE1-210ENST00000416778 CCDC173Q0VFZ6 552 aa17.83■□□□□ 0.44
CPNE1-210ENST00000416778 SPIDRQ14159 915 aa17.83■□□□□ 0.44
CPNE1-210ENST00000416778 ZFYVE27Q5T4F4 411 aa17.83■□□□□ 0.44
CPNE1-210ENST00000416778 LRRC38Q5VT99 294 aa17.83■□□□□ 0.44
CPNE1-210ENST00000416778 LRRC66Q68CR7 880 aa17.83■□□□□ 0.44
CPNE1-210ENST00000416778 SLC9A4Q6AI14 798 aa17.83■□□□□ 0.44
CPNE1-210ENST00000416778 C17orf82Q86X59 251 aaPredicted RBP17.83■□□□□ 0.44
CPNE1-210ENST00000416778 VSIG1Q86XK7 387 aa17.83■□□□□ 0.44
CPNE1-210ENST00000416778 RHOT2Q8IXI1 618 aa17.83■□□□□ 0.44
CPNE1-210ENST00000416778 SCAMP4Q969E2 229 aa17.83■□□□□ 0.44
CPNE1-210ENST00000416778 SCARF2Q96GP6 870 aaPredicted RBP17.83■□□□□ 0.44
CPNE1-210ENST00000416778 TDRD1Q9BXT4 1180 aaKnown RBP17.83■□□□□ 0.44
CPNE1-210ENST00000416778 LRRN3Q9H3W5 708 aa17.83■□□□□ 0.44
CPNE1-210ENST00000416778 DPEP2Q9H4A9 486 aa17.83■□□□□ 0.44
CPNE1-210ENST00000416778 CARS2Q9HA77 564 aaKnown RBP17.83■□□□□ 0.44
CPNE1-210ENST00000416778 TRNAU1APQ9NX07 287 aaKnown RBP17.83■□□□□ 0.44
CPNE1-210ENST00000416778 CD84Q9UIB8 345 aa17.83■□□□□ 0.44
CPNE1-210ENST00000416778 INTUQ9ULD6 942 aa17.83■□□□□ 0.44
CPNE1-210ENST00000416778 RPL26L1Q9UNX3 145 aaKnown RBP17.83■□□□□ 0.44
CPNE1-210ENST00000416778 PCDHGA8Q9Y5G5 932 aa17.83■□□□□ 0.44
CPNE1-210ENST00000416778 ST14Q9Y5Y6 855 aa17.83■□□□□ 0.44
CPNE1-210ENST00000416778 PMS2P1A4D2B8 440 aa17.82■□□□□ 0.44
CPNE1-210ENST00000416778 AKR1B15C9JRZ8 316 aaPredicted RBP17.82■□□□□ 0.44
CPNE1-210ENST00000416778 KCNK1O00180 336 aa17.82■□□□□ 0.44
CPNE1-210ENST00000416778 ZNF30P17039 623 aa17.82■□□□□ 0.44
CPNE1-210ENST00000416778 STC1P52823 247 aa17.82■□□□□ 0.44
CPNE1-210ENST00000416778 EPHB1P54762 984 aa17.82■□□□□ 0.44
CPNE1-210ENST00000416778 HLTFQ14527 1009 aaKnown RBP eCLIP17.82■□□□□ 0.445e-8■■□□□ 14.2
CPNE1-210ENST00000416778 C14orf28Q4W4Y0 310 aa17.82■□□□□ 0.44
CPNE1-210ENST00000416778 C3orf38Q5JPI3 329 aa17.82■□□□□ 0.44
CPNE1-210ENST00000416778 FAM182AQ5T1J6 154 aa17.82■□□□□ 0.44
CPNE1-210ENST00000416778 CERCAMQ5T4B2 595 aa17.82■□□□□ 0.44
CPNE1-210ENST00000416778 RAET1GQ6H3X3 334 aa17.82■□□□□ 0.44
CPNE1-210ENST00000416778 ADAMTSL4Q6UY14 1074 aa17.82■□□□□ 0.44
CPNE1-210ENST00000416778 SPACA3Q8IXA5 215 aa17.82■□□□□ 0.44
CPNE1-210ENST00000416778 RAVER1Q8IY67 606 aaKnown RBP17.82■□□□□ 0.44
CPNE1-210ENST00000416778 NRSN1Q8IZ57 195 aa17.82■□□□□ 0.44
CPNE1-210ENST00000416778 ZNF248Q8NDW4 579 aa17.82■□□□□ 0.44
CPNE1-210ENST00000416778 AP2M1Q96CW1 435 aa17.82■□□□□ 0.44
CPNE1-210ENST00000416778 LYSMD1Q96S90 227 aa17.82■□□□□ 0.44
CPNE1-210ENST00000416778 AGAP2Q99490 1192 aa17.82■□□□□ 0.44
CPNE1-210ENST00000416778 MAK16Q9BXY0 300 aaKnown RBP17.82■□□□□ 0.44
CPNE1-210ENST00000416778 PCDH9Q9HC56 1237 aa17.82■□□□□ 0.44
CPNE1-210ENST00000416778 LRIT1Q9P2V4 623 aa17.82■□□□□ 0.44
CPNE1-210ENST00000416778 SUFUQ9UMX1 484 aa17.82■□□□□ 0.44
CPNE1-210ENST00000416778 HEY1Q9Y5J3 304 aa17.82■□□□□ 0.44
CPNE1-210ENST00000416778 RNF215Q9Y6U7 377 aa17.82■□□□□ 0.44
CPNE1-210ENST00000416778 BPTFQ12830 3046 aa17.81■□□□□ 0.44
CPNE1-210ENST00000416778 ANKRD66B4E2M5 251 aa17.81■□□□□ 0.44
CPNE1-210ENST00000416778 CLDN7O95471 211 aa17.81■□□□□ 0.44
CPNE1-210ENST00000416778 IVLP07476 585 aa17.81■□□□□ 0.44
CPNE1-210ENST00000416778 RBMS1P29558 406 aaKnown RBP17.81■□□□□ 0.44
CPNE1-210ENST00000416778 SLC1A1P43005 524 aa17.81■□□□□ 0.44
CPNE1-210ENST00000416778 GPR1P46091 355 aa17.81■□□□□ 0.44
CPNE1-210ENST00000416778 IFI35P80217 286 aaPredicted RBP17.81■□□□□ 0.44
CPNE1-210ENST00000416778 SKOR1P84550 965 aa17.81■□□□□ 0.44
CPNE1-210ENST00000416778 TLE3Q04726 772 aa17.81■□□□□ 0.44
CPNE1-210ENST00000416778 QPCTQ16769 361 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms