RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 SMTNL2Q2TAL5 461 aa13.26□□□□□ -0.29
CTHRC1-202ENST00000415886 MAP7D3Q8IWC1 876 aa13.26□□□□□ -0.29
CTHRC1-202ENST00000415886 BBS5Q8N3I7 341 aa13.26□□□□□ -0.29
CTHRC1-202ENST00000415886 KCTD6Q8NC69 237 aa13.26□□□□□ -0.29
CTHRC1-202ENST00000415886 CCL4L1Q8NHW4 92 aa13.26□□□□□ -0.29
CTHRC1-202ENST00000415886 ZNF564Q8TBZ8 553 aaPredicted RBP13.26□□□□□ -0.29
CTHRC1-202ENST00000415886 PMEPA1Q969W9 287 aa13.26□□□□□ -0.29
CTHRC1-202ENST00000415886 BTBD6Q96KE9 485 aa13.26□□□□□ -0.29
CTHRC1-202ENST00000415886 CINPQ9BW66 212 aaPredicted RBP13.26□□□□□ -0.29
CTHRC1-202ENST00000415886 TMEM168Q9H0V1 697 aa13.26□□□□□ -0.29
CTHRC1-202ENST00000415886 EPN3Q9H201 632 aa13.26□□□□□ -0.29
CTHRC1-202ENST00000415886 DPEP2Q9H4A9 486 aa13.26□□□□□ -0.29
CTHRC1-202ENST00000415886 LRRC19Q9H756 370 aa13.26□□□□□ -0.29
CTHRC1-202ENST00000415886 FGF22Q9HCT0 170 aa13.26□□□□□ -0.29
CTHRC1-202ENST00000415886 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.26□□□□□ -0.29
CTHRC1-202ENST00000415886 SSU72P8A0A1W2PR75 194 aa13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 TSPAN11A1L157 253 aa13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 AKR1B15C9JRZ8 316 aaPredicted RBP13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 STMND1H3BQB6 276 aa13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 NUDT21O43809 227 aaKnown RBP13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 AMPD1P23109 780 aa13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 IL1R2P27930 398 aa13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 MMP12P39900 470 aa13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 SUOXP51687 545 aa13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 ARSDP51689 593 aa13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 CDH6P55285 790 aa13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 MAZP56270 477 aaKnown RBP13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 KIAA1024LP59773 190 aa13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 B4GALNT1Q00973 533 aa13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 IL10RBQ08334 325 aa13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 UBAP2LQ14157 1087 aaKnown RBP13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 RFTN1Q14699 578 aaPredicted RBP13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 AGERQ15109 404 aa13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 DPYSL2Q16555 572 aa13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 AMZ1Q400G9 498 aa13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 ERAP2Q6P179 960 aa13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 BORAQ6PGQ7 559 aa13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 ZSWIM9Q86XI8 627 aa13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 CNGA4Q8IV77 575 aa13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 NIPA2Q8N8Q9 360 aa13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 RCBTB1Q8NDN9 531 aa13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 OR56A4Q8NGH8 313 aa13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 HCAR2Q8TDS4 363 aa13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 TEKT4Q8WW24 435 aa13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 FUBP1Q96AE4 644 aaKnown RBP13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 DNAJC7Q99615 494 aa13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 NUDT22Q9BRQ3 303 aa13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 ADNPQ9H2P0 1102 aa13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 SUV39H2Q9H5I1 410 aa13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 UVRAGQ9P2Y5 699 aa13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 SEPT3Q9UH03 358 aa13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 ZFC3H1O60293 1989 aaKnown RBP13.25□□□□□ -0.29
CTHRC1-202ENST00000415886 BOD1L1Q8NFC6 3051 aa13.24□□□□□ -0.29
CTHRC1-202ENST00000415886 AHCTF1Q8WYP5 2266 aa13.24□□□□□ -0.29
CTHRC1-202ENST00000415886 CACNB4O00305 520 aaPredicted RBP13.24□□□□□ -0.29
CTHRC1-202ENST00000415886 B4GAT1O43505 415 aa13.24□□□□□ -0.29
CTHRC1-202ENST00000415886 CPNE6O95741 557 aa13.24□□□□□ -0.29
CTHRC1-202ENST00000415886 SERPINB6P35237 376 aa13.24□□□□□ -0.29
CTHRC1-202ENST00000415886 GJC1P36383 396 aa13.24□□□□□ -0.29
CTHRC1-202ENST00000415886 ATP1A2P50993 1020 aa13.24□□□□□ -0.29
CTHRC1-202ENST00000415886 POLE2P56282 527 aa13.24□□□□□ -0.29
CTHRC1-202ENST00000415886 OR1D5P58170 312 aa13.24□□□□□ -0.29
CTHRC1-202ENST00000415886 POLR2LP62875 67 aaKnown RBP13.24□□□□□ -0.29
CTHRC1-202ENST00000415886 KCNAB2Q13303 367 aa13.24□□□□□ -0.29
CTHRC1-202ENST00000415886 IGFBP7Q16270 282 aa13.24□□□□□ -0.29
CTHRC1-202ENST00000415886 ODF2Q5BJF6 829 aa13.24□□□□□ -0.29
CTHRC1-202ENST00000415886 TMCO4Q5TGY1 634 aa13.24□□□□□ -0.29
CTHRC1-202ENST00000415886 TMEM164Q5U3C3 297 aa13.24□□□□□ -0.29
CTHRC1-202ENST00000415886 POLNQ7Z5Q5 900 aa13.24□□□□□ -0.29
CTHRC1-202ENST00000415886 SRLQ86TD4 932 aa13.24□□□□□ -0.29
CTHRC1-202ENST00000415886 PIM3Q86V86 326 aa13.24□□□□□ -0.29
CTHRC1-202ENST00000415886 NKD1Q969G9 470 aa13.24□□□□□ -0.29
CTHRC1-202ENST00000415886 ZNF641Q96N77 438 aaPredicted RBP13.24□□□□□ -0.29
CTHRC1-202ENST00000415886 CSPG4P5Q96PW8 444 aa13.24□□□□□ -0.29
CTHRC1-202ENST00000415886 B3GNT4Q9C0J1 378 aa13.24□□□□□ -0.29
CTHRC1-202ENST00000415886 NHEJ1Q9H9Q4 299 aaPredicted RBP13.24□□□□□ -0.29
CTHRC1-202ENST00000415886 CYP4F12Q9HCS2 524 aa13.24□□□□□ -0.29
CTHRC1-202ENST00000415886 ABHD10Q9NUJ1 306 aa13.24□□□□□ -0.29
CTHRC1-202ENST00000415886 AKAP7Q9P0M2 348 aaPredicted RBP13.24□□□□□ -0.29
CTHRC1-202ENST00000415886 MOSPD1Q9UJG1 213 aa13.24□□□□□ -0.29
CTHRC1-202ENST00000415886 ATP8A1Q9Y2Q0 1164 aa13.24□□□□□ -0.29
CTHRC1-202ENST00000415886 SPTA1P02549 2419 aa13.24□□□□□ -0.29
CTHRC1-202ENST00000415886 UBR5O95071 2799 aaPredicted RBP13.24□□□□□ -0.29
CTHRC1-202ENST00000415886 SDK2Q58EX2 2172 aa13.24□□□□□ -0.29
CTHRC1-202ENST00000415886 IGHV5-10-1A0A0J9YXX1 117 aa13.23□□□□□ -0.29
CTHRC1-202ENST00000415886 BUB1BO60566 1050 aaPredicted RBP13.23□□□□□ -0.29
CTHRC1-202ENST00000415886 RECQL5O94762 991 aaPredicted RBP13.23□□□□□ -0.29
CTHRC1-202ENST00000415886 PROSCO94903 275 aa13.23□□□□□ -0.29
CTHRC1-202ENST00000415886 NTRK1P04629 796 aa13.23□□□□□ -0.29
CTHRC1-202ENST00000415886 KRT7P08729 469 aa13.23□□□□□ -0.29
CTHRC1-202ENST00000415886 FGF3P11487 239 aaPredicted RBP13.23□□□□□ -0.29
CTHRC1-202ENST00000415886 LIFP15018 202 aa13.23□□□□□ -0.29
CTHRC1-202ENST00000415886 SERPINA4P29622 427 aa13.23□□□□□ -0.29
CTHRC1-202ENST00000415886 ALDH4A1P30038 563 aa13.23□□□□□ -0.29
CTHRC1-202ENST00000415886 CSNK1DP48730 415 aa13.23□□□□□ -0.29
CTHRC1-202ENST00000415886 SCNN1BP51168 640 aa13.23□□□□□ -0.29
CTHRC1-202ENST00000415886 BCL2L1Q07817 233 aa13.23□□□□□ -0.29
CTHRC1-202ENST00000415886 NSUN2Q08J23 767 aaKnown RBP eCLIP13.23□□□□□ -0.29
CTHRC1-202ENST00000415886 RALGDSQ12967 914 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms