RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 OR13H1Q8NG92 308 aa16.46■□□□□ 0.23
LINC00398-201ENST00000414407 SLCO2A1Q92959 643 aa16.46■□□□□ 0.23
LINC00398-201ENST00000414407 CAPZA3Q96KX2 299 aa16.46■□□□□ 0.23
LINC00398-201ENST00000414407 C16orf45Q96MC5 204 aaPredicted RBP16.46■□□□□ 0.23
LINC00398-201ENST00000414407 RUNDC3BQ96NL0 473 aa16.46■□□□□ 0.23
LINC00398-201ENST00000414407 C19orf43Q9BQ61 176 aa16.46■□□□□ 0.23
LINC00398-201ENST00000414407 GPR63Q9BZJ6 419 aa16.46■□□□□ 0.23
LINC00398-201ENST00000414407 GDF3Q9NR23 364 aa16.46■□□□□ 0.23
LINC00398-201ENST00000414407 EIF2B3Q9NR50 452 aaKnown RBP16.46■□□□□ 0.23
LINC00398-201ENST00000414407 RAB6BQ9NRW1 208 aa16.46■□□□□ 0.23
LINC00398-201ENST00000414407 PKD2L2Q9NZM6 624 aa16.46■□□□□ 0.23
LINC00398-201ENST00000414407 NFKBIL1Q9UBC1 381 aaPredicted RBP16.46■□□□□ 0.23
LINC00398-201ENST00000414407 SNX11Q9Y5W9 270 aa16.46■□□□□ 0.23
LINC00398-201ENST00000414407 DOCK9Q9BZ29 2069 aa16.46■□□□□ 0.22
LINC00398-201ENST00000414407 WDR87Q6ZQQ6 2873 aa16.45■□□□□ 0.22
LINC00398-201ENST00000414407 ZNF292O60281 2723 aa16.45■□□□□ 0.22
LINC00398-201ENST00000414407 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.45■□□□□ 0.22
LINC00398-201ENST00000414407 A0A0U1RQS6 177 aa16.45■□□□□ 0.22
LINC00398-201ENST00000414407 SPTY2D1-AS1A0A0U1RR47 76 aa16.45■□□□□ 0.22
LINC00398-201ENST00000414407 CCDC188H7C350 402 aa16.45■□□□□ 0.22
LINC00398-201ENST00000414407 CDX4O14627 284 aaPredicted RBP16.45■□□□□ 0.22
LINC00398-201ENST00000414407 GAS8O95995 478 aa16.45■□□□□ 0.22
LINC00398-201ENST00000414407 PYGLP06737 847 aa16.45■□□□□ 0.22
LINC00398-201ENST00000414407 PIRTP0C851 137 aa16.45■□□□□ 0.22
LINC00398-201ENST00000414407 ZNF883P0CG24 379 aa16.45■□□□□ 0.22
LINC00398-201ENST00000414407 TSHRP16473 764 aa16.45■□□□□ 0.22
LINC00398-201ENST00000414407 PTK2BQ14289 1009 aa16.45■□□□□ 0.22
LINC00398-201ENST00000414407 INPP5AQ14642 412 aa16.45■□□□□ 0.22
LINC00398-201ENST00000414407 HLA-BQ31612 363 aa16.45■□□□□ 0.22
LINC00398-201ENST00000414407 FAXCQ5TGI0 409 aa16.45■□□□□ 0.22
LINC00398-201ENST00000414407 PNCKQ6P2M8 343 aa16.45■□□□□ 0.22
LINC00398-201ENST00000414407 PTAR1Q7Z6K3 402 aaPredicted RBP16.45■□□□□ 0.22
LINC00398-201ENST00000414407 PRUNE1Q86TP1 453 aa16.45■□□□□ 0.22
LINC00398-201ENST00000414407 EID2BQ96D98 161 aa16.45■□□□□ 0.22
LINC00398-201ENST00000414407 ABCG8Q9H221 673 aa16.45■□□□□ 0.22
LINC00398-201ENST00000414407 TMEM9BQ9NQ34 198 aa16.45■□□□□ 0.22
LINC00398-201ENST00000414407 FSCN3Q9NQT6 498 aa16.45■□□□□ 0.22
LINC00398-201ENST00000414407 DNAAF2Q9NVR5 837 aaKnown RBP16.45■□□□□ 0.22
LINC00398-201ENST00000414407 PCYOX1Q9UHG3 505 aa16.45■□□□□ 0.22
LINC00398-201ENST00000414407 SHOC2Q9UQ13 582 aa16.45■□□□□ 0.22
LINC00398-201ENST00000414407 NEU2Q9Y3R4 380 aa16.45■□□□□ 0.22
LINC00398-201ENST00000414407 SPO11Q9Y5K1 396 aa16.45■□□□□ 0.22
LINC00398-201ENST00000414407 LRRK1Q38SD2 2015 aa16.45■□□□□ 0.22
LINC00398-201ENST00000414407 GVINP1Q7Z2Y8 2422 aa16.44■□□□□ 0.22
LINC00398-201ENST00000414407 E7EVH7 732 aa16.44■□□□□ 0.22
LINC00398-201ENST00000414407 PPFIA2O75334 1257 aa16.44■□□□□ 0.22
LINC00398-201ENST00000414407 ECEL1O95672 775 aa16.44■□□□□ 0.22
LINC00398-201ENST00000414407 KRT14P02533 472 aa16.44■□□□□ 0.22
LINC00398-201ENST00000414407 PCCBP05166 539 aa16.44■□□□□ 0.22
LINC00398-201ENST00000414407 RXRGP48443 463 aa16.44■□□□□ 0.22
LINC00398-201ENST00000414407 DCDC1P59894 354 aa16.44■□□□□ 0.22
LINC00398-201ENST00000414407 CDK16Q00536 496 aa16.44■□□□□ 0.22
LINC00398-201ENST00000414407 SLC14A1Q13336 389 aa16.44■□□□□ 0.22
LINC00398-201ENST00000414407 MSLNQ13421 630 aaPredicted RBP16.44■□□□□ 0.22
LINC00398-201ENST00000414407 SPARCL1Q14515 664 aa16.44■□□□□ 0.22
LINC00398-201ENST00000414407 ZDHHC20Q5W0Z9 365 aa16.44■□□□□ 0.22
LINC00398-201ENST00000414407 SPATS2Q86XZ4 545 aaKnown RBP16.44■□□□□ 0.22
LINC00398-201ENST00000414407 SLC22A18ASQ8N1D0 253 aa16.44■□□□□ 0.22
LINC00398-201ENST00000414407 TTC30BQ8N4P2 665 aa16.44■□□□□ 0.22
LINC00398-201ENST00000414407 MINDY1Q8N5J2 469 aa16.44■□□□□ 0.22
LINC00398-201ENST00000414407 PLA2G15Q8NCC3 412 aa16.44■□□□□ 0.22
LINC00398-201ENST00000414407 DTX3LQ8TDB6 740 aa16.44■□□□□ 0.22
LINC00398-201ENST00000414407 BRSK1Q8TDC3 778 aa16.44■□□□□ 0.22
LINC00398-201ENST00000414407 NETO1Q8TDF5 533 aa16.44■□□□□ 0.22
LINC00398-201ENST00000414407 BLOC1S5Q8TDH9 187 aa16.44■□□□□ 0.22
LINC00398-201ENST00000414407 AP2M1Q96CW1 435 aa16.44■□□□□ 0.22
LINC00398-201ENST00000414407 ELF4Q99607 663 aaPredicted RBP16.44■□□□□ 0.22
LINC00398-201ENST00000414407 APOL2Q9BQE5 337 aa16.44■□□□□ 0.22
LINC00398-201ENST00000414407 APOOQ9BUR5 198 aa16.44■□□□□ 0.22
LINC00398-201ENST00000414407 GTPBP2Q9BX10 602 aaKnown RBP16.44■□□□□ 0.22
LINC00398-201ENST00000414407 FAM83DQ9H4H8 585 aa16.44■□□□□ 0.22
LINC00398-201ENST00000414407 GAREM1Q9H706 876 aa16.44■□□□□ 0.22
LINC00398-201ENST00000414407 RXFP3Q9NSD7 469 aa16.44■□□□□ 0.22
LINC00398-201ENST00000414407 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.44■□□□□ 0.22
LINC00398-201ENST00000414407 AP3B1O00203 1094 aa16.43■□□□□ 0.22
LINC00398-201ENST00000414407 PDE2AO00408 941 aaPredicted RBP16.43■□□□□ 0.22
LINC00398-201ENST00000414407 YKT6O15498 198 aa16.43■□□□□ 0.22
LINC00398-201ENST00000414407 GDF9O60383 454 aa16.43■□□□□ 0.22
LINC00398-201ENST00000414407 USP12O75317 370 aa16.43■□□□□ 0.22
LINC00398-201ENST00000414407 APRTP07741 180 aa16.43■□□□□ 0.22
LINC00398-201ENST00000414407 MAGEA6P43360 314 aa16.43■□□□□ 0.22
LINC00398-201ENST00000414407 LMAN1P49257 510 aa16.43■□□□□ 0.22
LINC00398-201ENST00000414407 ARRB1P49407 418 aaPredicted RBP16.43■□□□□ 0.22
LINC00398-201ENST00000414407 THOP1P52888 689 aa16.43■□□□□ 0.22
LINC00398-201ENST00000414407 KIAA1024LP59773 190 aa16.43■□□□□ 0.22
LINC00398-201ENST00000414407 PDE1BQ01064 536 aa16.43■□□□□ 0.22
LINC00398-201ENST00000414407 OLIG2Q13516 323 aa16.43■□□□□ 0.22
LINC00398-201ENST00000414407 PDE1CQ14123 709 aaPredicted RBP16.43■□□□□ 0.22
LINC00398-201ENST00000414407 TAF1AQ15573 450 aaPredicted RBP16.43■□□□□ 0.22
LINC00398-201ENST00000414407 HENMT1Q5T8I9 393 aaKnown RBP16.43■□□□□ 0.22
LINC00398-201ENST00000414407 GLT6D1Q7Z4J2 308 aa16.43■□□□□ 0.22
LINC00398-201ENST00000414407 TAB3Q8N5C8 712 aaPredicted RBP16.43■□□□□ 0.22
LINC00398-201ENST00000414407 PLEKHG4BQ96PX9 1271 aa16.43■□□□□ 0.22
LINC00398-201ENST00000414407 TEX101Q9BY14 249 aa16.43■□□□□ 0.22
LINC00398-201ENST00000414407 DDX47Q9H0S4 455 aaKnown RBP16.43■□□□□ 0.22
LINC00398-201ENST00000414407 IL17CQ9P0M4 197 aa16.43■□□□□ 0.22
LINC00398-201ENST00000414407 PTPRZ1P23471 2315 aaPredicted RBP16.43■□□□□ 0.22
LINC00398-201ENST00000414407 LAMA1P25391 3075 aa16.43■□□□□ 0.22
LINC00398-201ENST00000414407 A0A1B0GTQ1 180 aa16.42■□□□□ 0.22
LINC00398-201ENST00000414407 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms