RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 STC1P52823 247 aa14.69□□□□□ -0.06
CHD1-202ENST00000414220 WNT3AP56704 352 aa14.69□□□□□ -0.06
CHD1-202ENST00000414220 PTSQ03393 145 aa14.69□□□□□ -0.06
CHD1-202ENST00000414220 GSE1Q14687 1217 aa14.69□□□□□ -0.06
CHD1-202ENST00000414220 ARHGEF18Q6ZSZ5 1173 aa14.69□□□□□ -0.06
CHD1-202ENST00000414220 TECPR1Q7Z6L1 1165 aa14.69□□□□□ -0.06
CHD1-202ENST00000414220 SLC13A5Q86YT5 568 aaPredicted RBP14.69□□□□□ -0.06
CHD1-202ENST00000414220 HID1Q8IV36 788 aa14.69□□□□□ -0.06
CHD1-202ENST00000414220 PHACTR4Q8IZ21 702 aa14.69□□□□□ -0.06
CHD1-202ENST00000414220 CBARPQ8N350 705 aaPredicted RBP14.69□□□□□ -0.06
CHD1-202ENST00000414220 SDR16C5Q8N3Y7 309 aa14.69□□□□□ -0.06
CHD1-202ENST00000414220 FSTL5Q8N475 847 aaPredicted RBP14.69□□□□□ -0.06
CHD1-202ENST00000414220 OR56A4Q8NGH8 313 aa14.69□□□□□ -0.06
CHD1-202ENST00000414220 LMX1AQ8TE12 382 aa14.69□□□□□ -0.06
CHD1-202ENST00000414220 TADA1Q96BN2 335 aa14.69□□□□□ -0.06
CHD1-202ENST00000414220 CNDP2Q96KP4 475 aaKnown RBP14.69□□□□□ -0.06
CHD1-202ENST00000414220 SPATA13Q96N96 652 aa14.69□□□□□ -0.06
CHD1-202ENST00000414220 NCKIPSDQ9NZQ3 722 aa14.69□□□□□ -0.06
CHD1-202ENST00000414220 HACD3Q9P035 362 aa14.69□□□□□ -0.06
CHD1-202ENST00000414220 MOSPD1Q9UJG1 213 aa14.69□□□□□ -0.06
CHD1-202ENST00000414220 C5orf60A6NFR6 353 aa14.68□□□□□ -0.06
CHD1-202ENST00000414220 ENC1O14682 589 aa14.68□□□□□ -0.06
CHD1-202ENST00000414220 SCAMP1O15126 338 aa14.68□□□□□ -0.06
CHD1-202ENST00000414220 PSMD3O43242 534 aa14.68□□□□□ -0.06
CHD1-202ENST00000414220 AQP9O43315 295 aa14.68□□□□□ -0.06
CHD1-202ENST00000414220 KIF5CO60282 957 aa14.68□□□□□ -0.06
CHD1-202ENST00000414220 ANXA6P08133 673 aa14.68□□□□□ -0.06
CHD1-202ENST00000414220 MYCLP1P12525 358 aaPredicted RBP14.68□□□□□ -0.06
CHD1-202ENST00000414220 HK3P52790 923 aa14.68□□□□□ -0.06
CHD1-202ENST00000414220 SRP54P61011 504 aaKnown RBP14.68□□□□□ -0.06
CHD1-202ENST00000414220 DAB2P98082 770 aa14.68□□□□□ -0.06
CHD1-202ENST00000414220 EIF2B5Q13144 721 aaKnown RBP14.68□□□□□ -0.06
CHD1-202ENST00000414220 KLF1Q13351 362 aaPredicted RBP14.68□□□□□ -0.06
CHD1-202ENST00000414220 PEX6Q13608 980 aa14.68□□□□□ -0.06
CHD1-202ENST00000414220 P3H1Q32P28 736 aa14.68□□□□□ -0.06
CHD1-202ENST00000414220 PRRT3Q5FWE3 981 aa14.68□□□□□ -0.06
CHD1-202ENST00000414220 ZDHHC20Q5W0Z9 365 aa14.68□□□□□ -0.06
CHD1-202ENST00000414220 RD3Q7Z3Z2 195 aa14.68□□□□□ -0.06
CHD1-202ENST00000414220 GKN2Q86XP6 184 aa14.68□□□□□ -0.06
CHD1-202ENST00000414220 PLA2G15Q8NCC3 412 aa14.68□□□□□ -0.06
CHD1-202ENST00000414220 IPMKQ8NFU5 416 aa14.68□□□□□ -0.06
CHD1-202ENST00000414220 BAHD1Q8TBE0 780 aaPredicted RBP14.68□□□□□ -0.06
CHD1-202ENST00000414220 FUBP1Q96AE4 644 aaKnown RBP14.68□□□□□ -0.06
CHD1-202ENST00000414220 TRIB3Q96RU7 358 aa14.68□□□□□ -0.06
CHD1-202ENST00000414220 FAM118BQ9BPY3 351 aa14.68□□□□□ -0.06
CHD1-202ENST00000414220 HERPUD2Q9BSE4 406 aa14.68□□□□□ -0.06
CHD1-202ENST00000414220 ABCG8Q9H221 673 aa14.68□□□□□ -0.06
CHD1-202ENST00000414220 FAM83DQ9H4H8 585 aa14.68□□□□□ -0.06
CHD1-202ENST00000414220 USP29Q9HBJ7 922 aa14.68□□□□□ -0.06
CHD1-202ENST00000414220 HOMER3Q9NSC5 361 aa14.68□□□□□ -0.06
CHD1-202ENST00000414220 NLGN3Q9NZ94 848 aa14.68□□□□□ -0.06
CHD1-202ENST00000414220 CD84Q9UIB8 345 aa14.68□□□□□ -0.06
CHD1-202ENST00000414220 ZNF148Q9UQR1 794 aa14.68□□□□□ -0.06
CHD1-202ENST00000414220 BTBD3Q9Y2F9 522 aa14.68□□□□□ -0.06
CHD1-202ENST00000414220 ZKSCAN5Q9Y2L8 839 aa14.68□□□□□ -0.06
CHD1-202ENST00000414220 JRKLQ9Y4A0 524 aa14.68□□□□□ -0.06
CHD1-202ENST00000414220 LOC285095A0A1B0GVY8 99 aa14.67□□□□□ -0.06
CHD1-202ENST00000414220 TPP1O14773 563 aa14.67□□□□□ -0.06
CHD1-202ENST00000414220 FFAR2O15552 330 aa14.67□□□□□ -0.06
CHD1-202ENST00000414220 FGF1P05230 155 aa14.67□□□□□ -0.06
CHD1-202ENST00000414220 C1SP09871 688 aa14.67□□□□□ -0.06
CHD1-202ENST00000414220 FTH1P19P0C7X4 201 aa14.67□□□□□ -0.06
CHD1-202ENST00000414220 SPINT3P49223 89 aa14.67□□□□□ -0.06
CHD1-202ENST00000414220 RPIAP49247 311 aa14.67□□□□□ -0.06
CHD1-202ENST00000414220 FOXC1Q12948 553 aa14.67□□□□□ -0.06
CHD1-202ENST00000414220 IHHQ14623 411 aa14.67□□□□□ -0.06
CHD1-202ENST00000414220 PARP6Q2NL67 630 aa14.67□□□□□ -0.06
CHD1-202ENST00000414220 HEATR4Q86WZ0 1026 aa14.67□□□□□ -0.06
CHD1-202ENST00000414220 SLC25A45Q8N413 288 aa14.67□□□□□ -0.06
CHD1-202ENST00000414220 ZNF548Q8NEK5 533 aaPredicted RBP14.67□□□□□ -0.06
CHD1-202ENST00000414220 OR4C6Q8NH72 309 aa14.67□□□□□ -0.06
CHD1-202ENST00000414220 C10orf88Q9H8K7 445 aa14.67□□□□□ -0.06
CHD1-202ENST00000414220 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.67□□□□□ -0.06
CHD1-202ENST00000414220 FEZ2Q9UHY8 353 aaPredicted RBP14.67□□□□□ -0.06
CHD1-202ENST00000414220 ZNF711Q9Y462 761 aa14.67□□□□□ -0.06
CHD1-202ENST00000414220 PCDHGA1Q9Y5H4 931 aa14.67□□□□□ -0.06
CHD1-202ENST00000414220 DGKBQ9Y6T7 804 aa14.67□□□□□ -0.06
CHD1-202ENST00000414220 ASCC3Q8N3C0 2202 aaKnown RBP14.67□□□□□ -0.06
CHD1-202ENST00000414220 ANKRD36A6QL64 1941 aa14.66□□□□□ -0.06
CHD1-202ENST00000414220 MED19A0JLT2 244 aaPredicted RBP14.66□□□□□ -0.06
CHD1-202ENST00000414220 CEP104O60308 925 aa14.66□□□□□ -0.06
CHD1-202ENST00000414220 GCATO75600 419 aa14.66□□□□□ -0.06
CHD1-202ENST00000414220 CKMT2P17540 419 aa14.66□□□□□ -0.06
CHD1-202ENST00000414220 GM2AP17900 193 aa14.66□□□□□ -0.06
CHD1-202ENST00000414220 CDK3Q00526 305 aa14.66□□□□□ -0.06
CHD1-202ENST00000414220 ILKQ13418 452 aa14.66□□□□□ -0.06
CHD1-202ENST00000414220 SLC1A5Q15758 541 aa14.66□□□□□ -0.06
CHD1-202ENST00000414220 LONRF2Q1L5Z9 754 aa14.66□□□□□ -0.06
CHD1-202ENST00000414220 ZCCHC8Q6NZY4 707 aaKnown RBP14.66□□□□□ -0.06
CHD1-202ENST00000414220 KDELC1Q6UW63 502 aa14.66□□□□□ -0.06
CHD1-202ENST00000414220 ADAMTSL4Q6UY14 1074 aa14.66□□□□□ -0.06
CHD1-202ENST00000414220 KANSL1Q7Z3B3 1105 aa14.66□□□□□ -0.06
CHD1-202ENST00000414220 LYSMD3Q7Z3D4 306 aa14.66□□□□□ -0.06
CHD1-202ENST00000414220 TMC3Q7Z5M5 1100 aa14.66□□□□□ -0.06
CHD1-202ENST00000414220 SLC25A41Q8N5S1 370 aa14.66□□□□□ -0.06
CHD1-202ENST00000414220 FAM71DQ8N9W8 422 aa14.66□□□□□ -0.06
CHD1-202ENST00000414220 SLC35B2Q8TB61 432 aa14.66□□□□□ -0.06
CHD1-202ENST00000414220 CCDC110Q8TBZ0 833 aa14.66□□□□□ -0.06
CHD1-202ENST00000414220 TSACCQ96A04 125 aaPredicted RBP14.66□□□□□ -0.06
CHD1-202ENST00000414220 HIC2Q96JB3 615 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms