RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	HMGCL	P35914	325 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	MPL	P40238	635 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	ETV3	P41162	512 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	GRIA1	P42261	906 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	SPINT3	P49223	89 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	RACK1	P63244	317 aa	Known RBP	13.14	□□□□□ -0.31
SF1-206	ENST00000413725	NHLH1	Q02575	133 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	SEPT6	Q14141	434 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	POU6F1	Q14863	301 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	MORF4L2	Q15014	288 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	TEAD4	Q15561	434 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	DUOXA1	Q1HG43	343 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	RNASEH2B	Q5TBB1	312 aa	Known RBP	13.14	□□□□□ -0.31
SF1-206	ENST00000413725	PEAR1	Q5VY43	1037 aa	Predicted RBP	13.14	□□□□□ -0.31
SF1-206	ENST00000413725	ANKRD22	Q5VYY1	191 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	ZDHHC20	Q5W0Z9	365 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	LRRC8B	Q6P9F7	803 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725		Q6ZVL8	140 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	ZNF765	Q7L2R6	523 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	CBARP	Q8N350	705 aa	Predicted RBP	13.14	□□□□□ -0.31
SF1-206	ENST00000413725	NAT8L	Q8N9F0	302 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	SKA1	Q96BD8	255 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	SLC6A18	Q96N87	628 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	ERP44	Q9BS26	406 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	CDH19	Q9H159	772 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	L2HGDH	Q9H9P8	463 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	EBF2	Q9HAK2	575 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	TM9SF3	Q9HD45	589 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	FZD3	Q9NPG1	666 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	BFAR	Q9NZS9	450 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	NCDN	Q9UBB6	729 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	HS3ST3A1	Q9Y663	406 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	PCDH15	Q96QU1	1955 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	HEATR9	A2RTY3	570 aa		13.13	□□□□□ -0.31
SF1-206	ENST00000413725		A6NNZ2	444 aa		13.13	□□□□□ -0.31
SF1-206	ENST00000413725	AURKA	O14965	403 aa		13.13	□□□□□ -0.31
SF1-206	ENST00000413725	RAD51B	O15315	384 aa		13.13	□□□□□ -0.31
SF1-206	ENST00000413725	STX7	O15400	261 aa	Known RBP	13.13	□□□□□ -0.31
SF1-206	ENST00000413725	MAGEC1	O60732	1142 aa		13.13	□□□□□ -0.31
SF1-206	ENST00000413725	PPFIA2	O75334	1257 aa		13.13	□□□□□ -0.31
SF1-206	ENST00000413725	TMEM63A	O94886	807 aa		13.13	□□□□□ -0.31
SF1-206	ENST00000413725	PCCB	P05166	539 aa		13.13	□□□□□ -0.31
SF1-206	ENST00000413725	PYGL	P06737	847 aa		13.13	□□□□□ -0.31
SF1-206	ENST00000413725	MLN	P12872	115 aa		13.13	□□□□□ -0.31
SF1-206	ENST00000413725	GM2A	P17900	193 aa		13.13	□□□□□ -0.31
SF1-206	ENST00000413725	IVD	P26440	423 aa		13.13	□□□□□ -0.31
SF1-206	ENST00000413725	CD38	P28907	300 aa		13.13	□□□□□ -0.31
SF1-206	ENST00000413725	IGFALS	P35858	605 aa		13.13	□□□□□ -0.31
SF1-206	ENST00000413725	RPL21	P46778	160 aa	Known RBP	13.13	□□□□□ -0.31
SF1-206	ENST00000413725	NPY2R	P49146	381 aa		13.13	□□□□□ -0.31
SF1-206	ENST00000413725	AFF3	P51826	1226 aa	Known RBP	13.13	□□□□□ -0.31
SF1-206	ENST00000413725	SESN2	P58004	480 aa	Predicted RBP	13.13	□□□□□ -0.31
SF1-206	ENST00000413725	DCDC1	P59894	354 aa		13.13	□□□□□ -0.31
SF1-206	ENST00000413725	MRPS25	P82663	173 aa	Known RBP	13.13	□□□□□ -0.31
SF1-206	ENST00000413725	CALCOCO2	Q13137	446 aa		13.13	□□□□□ -0.31
SF1-206	ENST00000413725	MSLN	Q13421	630 aa	Predicted RBP	13.13	□□□□□ -0.31
SF1-206	ENST00000413725	IRF4	Q15306	451 aa		13.13	□□□□□ -0.31
SF1-206	ENST00000413725	WSCD2	Q2TBF2	565 aa		13.13	□□□□□ -0.31
SF1-206	ENST00000413725	ESRP1	Q6NXG1	681 aa	Known RBP	13.13	□□□□□ -0.31
SF1-206	ENST00000413725	KYAT3	Q6YP21	454 aa	Known RBP	13.13	□□□□□ -0.31
SF1-206	ENST00000413725	TECPR1	Q7Z6L1	1165 aa		13.13	□□□□□ -0.31
SF1-206	ENST00000413725	TTC30B	Q8N4P2	665 aa		13.13	□□□□□ -0.31
SF1-206	ENST00000413725	TP53I13	Q8NBR0	393 aa	Predicted RBP	13.13	□□□□□ -0.31
SF1-206	ENST00000413725	TMEM145	Q8NBT3	493 aa		13.13	□□□□□ -0.31
SF1-206	ENST00000413725	PPHLN1	Q8NEY8	458 aa	Known RBP	13.13	□□□□□ -0.31
SF1-206	ENST00000413725	C1orf216	Q8TAB5	229 aa		13.13	□□□□□ -0.31
SF1-206	ENST00000413725	CENPT	Q96BT3	561 aa		13.13	□□□□□ -0.31
SF1-206	ENST00000413725	AP2M1	Q96CW1	435 aa		13.13	□□□□□ -0.31
SF1-206	ENST00000413725	RANBP9	Q96S59	729 aa		13.13	□□□□□ -0.31
SF1-206	ENST00000413725	KLF6	Q99612	283 aa	Predicted RBP	13.13	□□□□□ -0.31
SF1-206	ENST00000413725	FRMD8	Q9BZ67	464 aa	Predicted RBP	13.13	□□□□□ -0.31
SF1-206	ENST00000413725	IL22	Q9GZX6	179 aa		13.13	□□□□□ -0.31
SF1-206	ENST00000413725	ARRDC1-AS1	Q9H2J1	176 aa		13.13	□□□□□ -0.31
SF1-206	ENST00000413725	IL17C	Q9P0M4	197 aa		13.13	□□□□□ -0.31
SF1-206	ENST00000413725	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	13.13	□□□□□ -0.31
SF1-206	ENST00000413725	CD84	Q9UIB8	345 aa		13.13	□□□□□ -0.31
SF1-206	ENST00000413725	ARL5A	Q9Y689	179 aa		13.13	□□□□□ -0.31
SF1-206	ENST00000413725	GOLGA8M	H3BSY2	632 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	TOR1B	O14657	336 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	SEC31A	O94979	1220 aa	Known RBP	13.12	□□□□□ -0.31
SF1-206	ENST00000413725	CFI	P05156	583 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	TSHR	P16473	764 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	ADRA1D	P25100	572 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	ITGA8	P53708	1063 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	CLDN2	P57739	230 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	DPT	Q07507	201 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	OVGP1	Q12889	678 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	MTM1	Q13496	603 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	GLE1	Q53GS7	698 aa	Known RBP	13.12	□□□□□ -0.31
SF1-206	ENST00000413725	CERCAM	Q5T4B2	595 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	ARMC3	Q5W041	872 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	DUPD1	Q68J44	220 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	RAET1G	Q6H3X3	334 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	GCNT7	Q6ZNI0	430 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	ZNF534	Q76KX8	674 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	PTAR1	Q7Z6K3	402 aa	Predicted RBP	13.12	□□□□□ -0.31
SF1-206	ENST00000413725	ABI3BP	Q7Z7G0	1075 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	IQCH	Q86VS3	1027 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	NLRP8	Q86W28	1048 aa		13.12	□□□□□ -0.31
SF1-206	ENST00000413725	MFSD2A	Q8NA29	543 aa		13.12	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms