RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 TUBGCP5Q96RT8 1024 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 DPYSL5Q9BPU6 564 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 EFHD1Q9BUP0 239 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 GSDMCQ9BYG8 508 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 SUDS3Q9H7L9 328 aaPredicted RBP9.56□□□□□ -0.88
RFFL-203ENST00000413582 PDFQ9HBH1 243 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 TRNAU1APQ9NX07 287 aaKnown RBP9.56□□□□□ -0.88
RFFL-203ENST00000413582 UBA2Q9UBT2 640 aaPredicted RBP9.56□□□□□ -0.88
RFFL-203ENST00000413582 ST14Q9Y5Y6 855 aa9.56□□□□□ -0.88
RFFL-203ENST00000413582 C2CD4BA6NLJ0 364 aa9.55□□□□□ -0.88
RFFL-203ENST00000413582 K7EM74 188 aa9.55□□□□□ -0.88
RFFL-203ENST00000413582 PPM1DO15297 605 aa9.55□□□□□ -0.88
RFFL-203ENST00000413582 CEACAM5P06731 702 aa9.55□□□□□ -0.88
RFFL-203ENST00000413582 TPM2P07951 284 aa9.55□□□□□ -0.88
RFFL-203ENST00000413582 KRT7P08729 469 aa9.55□□□□□ -0.88
RFFL-203ENST00000413582 MAP4P27816 1152 aaKnown RBP9.55□□□□□ -0.88
RFFL-203ENST00000413582 EPHB2P29323 1055 aa9.55□□□□□ -0.88
RFFL-203ENST00000413582 PTPN9P43378 593 aa9.55□□□□□ -0.88
RFFL-203ENST00000413582 MTIF2P46199 727 aaKnown RBP9.55□□□□□ -0.88
RFFL-203ENST00000413582 MLLT10P55197 1068 aa9.55□□□□□ -0.88
RFFL-203ENST00000413582 YBEYP58557 167 aaPredicted RBP9.55□□□□□ -0.88
RFFL-203ENST00000413582 FANCCQ00597 558 aa9.55□□□□□ -0.88
RFFL-203ENST00000413582 ABHD18Q0P651 414 aa9.55□□□□□ -0.88
RFFL-203ENST00000413582 SEPT6Q14141 434 aa9.55□□□□□ -0.88
RFFL-203ENST00000413582 MAN2A1Q16706 1144 aa9.55□□□□□ -0.88
RFFL-203ENST00000413582 FILIP1LQ4L180 1135 aa9.55□□□□□ -0.88
RFFL-203ENST00000413582 CRTC2Q53ET0 693 aaPredicted RBP9.55□□□□□ -0.88
RFFL-203ENST00000413582 TCP11X2Q5H9J9 407 aa9.55□□□□□ -0.88
RFFL-203ENST00000413582 MIIPQ5JXC2 388 aa9.55□□□□□ -0.88
RFFL-203ENST00000413582 PNCKQ6P2M8 343 aa9.55□□□□□ -0.88
RFFL-203ENST00000413582 SLC30A9Q6PML9 568 aa9.55□□□□□ -0.88
RFFL-203ENST00000413582 STRADAQ7RTN6 431 aa9.55□□□□□ -0.88
RFFL-203ENST00000413582 TIPARPQ7Z3E1 657 aaKnown RBP9.55□□□□□ -0.88
RFFL-203ENST00000413582 NOP9Q86U38 636 aaKnown RBP9.55□□□□□ -0.88
RFFL-203ENST00000413582 HEATR4Q86WZ0 1026 aa9.55□□□□□ -0.88
RFFL-203ENST00000413582 NRSN1Q8IZ57 195 aa9.55□□□□□ -0.88
RFFL-203ENST00000413582 PYROXD2Q8N2H3 581 aa9.55□□□□□ -0.88
RFFL-203ENST00000413582 JOSD2Q8TAC2 188 aa9.55□□□□□ -0.88
RFFL-203ENST00000413582 EPS8L1Q8TE68 723 aa9.55□□□□□ -0.88
RFFL-203ENST00000413582 CPA5Q8WXQ8 436 aa9.55□□□□□ -0.88
RFFL-203ENST00000413582 CENPIQ92674 756 aaPredicted RBP9.55□□□□□ -0.88
RFFL-203ENST00000413582 MRFAP1L1Q96HT8 127 aa9.55□□□□□ -0.88
RFFL-203ENST00000413582 FRMD8Q9BZ67 464 aaPredicted RBP9.55□□□□□ -0.88
RFFL-203ENST00000413582 KCNK4Q9NYG8 393 aa9.55□□□□□ -0.88
RFFL-203ENST00000413582 PDP2Q9P2J9 529 aa9.55□□□□□ -0.88
RFFL-203ENST00000413582 FHOD1Q9Y613 1164 aa9.55□□□□□ -0.88
RFFL-203ENST00000413582 LRBAP50851 2863 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 TNRC6AQ8NDV7 1962 aaKnown RBP9.54□□□□□ -0.88
RFFL-203ENST00000413582 ENO4A6NNW6 628 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 WASH4PA8MWX3 477 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 PDE2AO00408 941 aaPredicted RBP9.54□□□□□ -0.88
RFFL-203ENST00000413582 TEX33O43247 280 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 STK17BO94768 372 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 AGFG2O95081 481 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 DLGAP3O95886 979 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 SERPINC1P01008 464 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 MMEP08473 750 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 RNF224P0DH78 156 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 MMP8P22894 467 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 SERPINA4P29622 427 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 CDC25BP30305 580 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 STAT5AP42229 794 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 GNPDA1P46926 289 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 UBASH3AP57075 661 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 GPLD1P80108 840 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 CTBSQ01459 385 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 MC1RQ01726 317 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 BIRC2Q13490 618 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 RAPGEF1Q13905 1077 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 CAPRIN2Q6IMN6 1127 aaKnown RBP9.54□□□□□ -0.88
RFFL-203ENST00000413582 TMEM71Q6P5X7 295 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 PHLDB2Q86SQ0 1253 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 CREBRFQ8IUR6 639 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 UMODL1-AS1Q8N2C9 162 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 FAM172AQ8WUF8 416 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 NUS1Q96E22 293 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 COQ10AQ96MF6 247 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 CTRCQ99895 268 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 TUBGCP2Q9BSJ2 902 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 TEX101Q9BY14 249 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 TRIM5Q9C035 493 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 ZMYND15Q9H091 742 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 LRRC19Q9H756 370 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 ATP13A3Q9H7F0 1226 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 PHPT1Q9NRX4 125 aaPredicted RBP9.54□□□□□ -0.88
RFFL-203ENST00000413582 SUFUQ9UMX1 484 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 TMEM184BQ9Y519 407 aaPredicted RBP9.54□□□□□ -0.88
RFFL-203ENST00000413582 MRPS18BQ9Y676 258 aaKnown RBP9.54□□□□□ -0.88
RFFL-203ENST00000413582 KCNMB2Q9Y691 235 aa9.54□□□□□ -0.88
RFFL-203ENST00000413582 CRYBG3Q68DQ2 2970 aa9.53□□□□□ -0.88
RFFL-203ENST00000413582 PRRC2CQ9Y520 2896 aaKnown RBP9.53□□□□□ -0.88
RFFL-203ENST00000413582 A0A1B0GTH6 734 aa9.53□□□□□ -0.88
RFFL-203ENST00000413582 J3KR12 359 aa9.53□□□□□ -0.88
RFFL-203ENST00000413582 TRAFD1O14545 582 aaPredicted RBP9.53□□□□□ -0.88
RFFL-203ENST00000413582 PRAMEF11O60813 436 aa9.53□□□□□ -0.88
RFFL-203ENST00000413582 CYP1A1P04798 512 aaPredicted RBP9.53□□□□□ -0.88
RFFL-203ENST00000413582 ATP1A3P13637 1013 aa9.53□□□□□ -0.88
RFFL-203ENST00000413582 TCN2P20062 427 aa9.53□□□□□ -0.88
RFFL-203ENST00000413582 GNLYP22749 145 aa9.53□□□□□ -0.88
RFFL-203ENST00000413582 ADCY8P40145 1251 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms