RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 TCRBV9S1A1TA0A576 114 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 GOLGA8TH3BQL2 631 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 DCLK1O15075 740 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 SLC7A4O43246 635 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 LILRB3O75022 631 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 RPSAP08865 295 aaKnown RBP8.53□□□□□ -1.04
SYNE1-211ENST00000413186 MYBL2P10244 700 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 KITP10721 976 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 GRK3P35626 688 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 MAPK9P45984 424 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 CACNA2D1P54289 1103 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 NTHL1P78549 312 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 RUNX3Q13761 415 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 DPYSQ14117 519 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 GRM2Q14416 872 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 DHCR24Q15392 516 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 TAF11Q15544 211 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 TAF1AQ15573 450 aaPredicted RBP8.53□□□□□ -1.04
SYNE1-211ENST00000413186 CHI3L2Q15782 390 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 TTMPQ5BVD1 217 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 TCEAL5Q5H9L2 206 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 ICE2Q659A1 982 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 TRAF7Q6Q0C0 670 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 MPP5Q8N3R9 675 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 BEND7Q8N7W2 519 aaPredicted RBP8.53□□□□□ -1.04
SYNE1-211ENST00000413186 SDCCAG3Q96C92 435 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 RTP3Q9BQQ7 232 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 KLF16Q9BXK1 252 aaPredicted RBP8.53□□□□□ -1.04
SYNE1-211ENST00000413186 FAM126AQ9BYI3 521 aaPredicted RBP8.53□□□□□ -1.04
SYNE1-211ENST00000413186 ELOVL2Q9NXB9 296 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 TRPC5OSA6NMA1 111 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 MEI4A8MW99 385 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 PRR23D1E9PI22 279 aaPredicted RBP8.53□□□□□ -1.04
SYNE1-211ENST00000413186 PRR23D2P0DMB1 279 aaPredicted RBP8.53□□□□□ -1.04
SYNE1-211ENST00000413186 GRIA4P48058 902 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 RAB14P61106 215 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 CACNG1Q06432 222 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 MYLK3Q32MK0 819 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 ATXN7L2Q5T6C5 722 aaPredicted RBP8.53□□□□□ -1.04
SYNE1-211ENST00000413186 TSTD2Q5T7W7 516 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 ARMC3Q5W041 872 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 DOK6Q6PKX4 331 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 HTR3DQ70Z44 454 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 RD3Q7Z3Z2 195 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 OR14C36Q8NHC7 312 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 AP2M1Q96CW1 435 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 TUBGCP5Q96RT8 1024 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 KXD1Q9BQD3 176 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 FEM1AQ9BSK4 669 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 SLC7A5P2Q9GIP4 190 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 ADAM7Q9H2U9 754 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 VPS51Q9UID3 782 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 J3KR12 359 aa8.52□□□□□ -1.04
SYNE1-211ENST00000413186 GRIA2P42262 883 aa8.52□□□□□ -1.04
SYNE1-211ENST00000413186 GLRBP48167 497 aa8.52□□□□□ -1.04
SYNE1-211ENST00000413186 CCR3P51677 355 aa8.52□□□□□ -1.04
SYNE1-211ENST00000413186 SEC13P55735 322 aa8.52□□□□□ -1.04
SYNE1-211ENST00000413186 ACTN3Q08043 901 aaPredicted RBP8.52□□□□□ -1.04
SYNE1-211ENST00000413186 TMEM259Q4ZIN3 620 aa8.52□□□□□ -1.04
SYNE1-211ENST00000413186 C2orf27AQ580R0 203 aa8.52□□□□□ -1.04
SYNE1-211ENST00000413186 ZNF776Q68DI1 518 aaPredicted RBP8.52□□□□□ -1.04
SYNE1-211ENST00000413186 PHC3Q8NDX5 983 aa8.52□□□□□ -1.04
SYNE1-211ENST00000413186 FIBINQ8TAL6 211 aa8.52□□□□□ -1.04
SYNE1-211ENST00000413186 ATL1Q8WXF7 558 aa8.52□□□□□ -1.04
SYNE1-211ENST00000413186 ERP27Q96DN0 273 aa8.52□□□□□ -1.04
SYNE1-211ENST00000413186 PSKH2Q96QS6 385 aa8.52□□□□□ -1.04
SYNE1-211ENST00000413186 IL36AQ9UHA7 158 aa8.52□□□□□ -1.04
SYNE1-211ENST00000413186 ORC6Q9Y5N6 252 aa8.52□□□□□ -1.04
SYNE1-211ENST00000413186 H0YGN5 161 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 AVILO75366 819 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 NEK3P51956 506 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 GDF10P55107 478 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 ATP6V0D1P61421 351 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 SNX30Q5VWJ9 437 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 VITQ6UXI7 678 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 FAM151BQ6UXP7 276 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 ZYG11AQ6WRX3 759 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 TTC30BQ8N4P2 665 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 CATSPER1Q8NEC5 780 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 STAG3L4Q8TBR4 150 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 ELMO1Q92556 727 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 IGSF8Q969P0 613 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 FAM136AQ96C01 138 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 NSL1Q96IY1 281 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 NPHS2Q9NP85 383 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 FBXO6Q9NRD1 293 aaPredicted RBP8.52□□□□□ -1.05
SYNE1-211ENST00000413186 TNPO3Q9Y5L0 923 aaKnown RBP8.52□□□□□ -1.05
SYNE1-211ENST00000413186 ARHGAP10A1A4S6 786 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 PRPF4O43172 522 aaKnown RBP eCLIP8.52□□□□□ -1.05
SYNE1-211ENST00000413186 SOCS5O75159 536 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 METTL18O95568 372 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 SRPRAP08240 638 aaKnown RBP8.52□□□□□ -1.05
SYNE1-211ENST00000413186 LTA4HP09960 611 aaKnown RBP8.52□□□□□ -1.05
SYNE1-211ENST00000413186 ITGB6P18564 788 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 CCNHP51946 323 aaPredicted RBP8.52□□□□□ -1.05
SYNE1-211ENST00000413186 HTRA4P83105 476 aaPredicted RBP8.52□□□□□ -1.05
SYNE1-211ENST00000413186 PUDPQ08623 228 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 USP4Q13107 963 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 KLF1Q13351 362 aaPredicted RBP8.52□□□□□ -1.05
SYNE1-211ENST00000413186 PRKD1Q15139 912 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms