RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 STEAP4Q687X5 459 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 PLEKHG7Q6ZR37 379 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 CCDC185Q8N715 623 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 PPM1MQ96MI6 270 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 NEK6Q9HC98 313 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 H0YAE9 185 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 SLC2A4P14672 509 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 HOXA10P31260 410 aaPredicted RBP13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 HPCAL1P37235 193 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 MATKP42679 507 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 TKTL1P51854 596 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 SCIMPQ6UWF3 145 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 TAGAPQ8N103 731 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 GRIN3AQ8TCU5 1115 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 SNX19Q92543 992 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 DMRTB1Q96MA1 342 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 GLIS2Q9BZE0 524 aaPredicted RBP13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 TRMT6Q9UJA5 497 aaKnown RBP13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 PCDHGA7Q9Y5G6 932 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 USP54Q70EL1 1684 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 AQP9O43315 295 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 TNFRSF21O75509 655 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 NPM3O75607 178 aaKnown RBP13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 PDE9AO76083 593 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 DCKP27707 260 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 CNTN2Q02246 1040 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 SIM2Q14190 667 aaPredicted RBP13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 EEF1DP3Q658K8 133 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 OR2T12Q8NG77 320 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 METTL6Q8TCB7 284 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 TSEN34Q9BSV6 310 aaKnown RBP13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 HGH1Q9BTY7 390 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 KRT87PA6NCN2 255 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 ASB14A6NK59 587 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 CHRM3P20309 590 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 EPHX2P34913 555 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 GSK3BP49841 420 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 OR2B6P58173 313 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 SV2CQ496J9 727 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 DACT2Q5SW24 774 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 MAVSQ7Z434 540 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 SLC51AQ86UW1 340 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 DENND6AQ8IWF6 608 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 STYXQ8WUJ0 223 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 FEM1AQ9BSK4 669 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 ADGRE2Q9UHX3 823 aa13.89□□□□□ -0.19
CLTCL1-201ENST00000412649 NAV1Q8NEY1 1877 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 SPDYE2BA6NHP3 402 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 AIREO43918 545 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 NOBOXO60393 691 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 UGT2B11O75310 529 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 SPDYE6P0CI01 402 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 RAP2AP10114 183 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 TAF6P49848 677 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 ALDH3A2P51648 485 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 ABHD15Q6UXT9 468 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 SPATA19Q7Z5L4 167 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 SCML4Q8N228 414 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 C19orf18Q8NEA5 215 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 TMBIM1Q969X1 311 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 GPR22Q99680 433 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 ACTR8Q9H981 624 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 CASS4Q9NQ75 786 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 NDFIP2Q9NV92 336 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 VWA7Q9Y334 891 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 EFCAB9A8MZ26 197 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 POLR2JP52435 117 aaKnown RBP13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 SH3BP5LQ7L8J4 393 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 NT5DC4Q86YG4 428 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 C1orf127Q8N9H9 656 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 GBA3Q9H227 469 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 TBC1D14Q9P2M4 693 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 MFHAS1Q9Y4C4 1052 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 TCAF2A6NFQ2 919 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 ALDH1A2O94788 518 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 PIGRP01833 764 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 HOXB8P17481 243 aaPredicted RBP13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 IFNA8P32881 189 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 ARL2P36404 184 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 ATXN1P54253 815 aaKnown RBP13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 TUBB3Q13509 450 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 RNF111Q6ZNA4 994 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 GALNT5Q7Z7M9 940 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 CERKQ8TCT0 537 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 UTP15Q8TED0 518 aaKnown RBP13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 MYDGFQ969H8 173 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 RTP4Q96DX8 246 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 HSFY1Q96LI6 401 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 OSBPL10Q9BXB5 764 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 NAA50Q9GZZ1 169 aaKnown RBP13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 RBM38Q9H0Z9 239 aaKnown RBP13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 ARMC1Q9NVT9 282 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 SFMBT1Q9UHJ3 866 aa13.88□□□□□ -0.19
CLTCL1-201ENST00000412649 FAM47E-STBD1D6RA91 191 aa13.87□□□□□ -0.19
CLTCL1-201ENST00000412649 M0QZ92 97 aa13.87□□□□□ -0.19
CLTCL1-201ENST00000412649 VPS26AO75436 327 aa13.87□□□□□ -0.19
CLTCL1-201ENST00000412649 MAFO75444 373 aaPredicted RBP13.87□□□□□ -0.19
CLTCL1-201ENST00000412649 CDH1P12830 882 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms