RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 CD207Q9UJ71 328 aa9.71□□□□□ -0.85
SMPD4-203ENST00000412570 EP300Q09472 2414 aaPredicted RBP9.71□□□□□ -0.86
SMPD4-203ENST00000412570 FAM237BA0A1B0GVD1 139 aa9.71□□□□□ -0.86
SMPD4-203ENST00000412570 LRRC14BA6NHZ5 514 aa9.71□□□□□ -0.86
SMPD4-203ENST00000412570 FAM159BA6NKW6 160 aa9.71□□□□□ -0.86
SMPD4-203ENST00000412570 MID1O15344 667 aa9.71□□□□□ -0.86
SMPD4-203ENST00000412570 SH3BGRLO75368 114 aa9.71□□□□□ -0.86
SMPD4-203ENST00000412570 USP1O94782 785 aa9.71□□□□□ -0.86
SMPD4-203ENST00000412570 CRTAMO95727 393 aa9.71□□□□□ -0.86
SMPD4-203ENST00000412570 EGFP01133 1207 aa9.71□□□□□ -0.86
SMPD4-203ENST00000412570 FGF1P05230 155 aa9.71□□□□□ -0.86
SMPD4-203ENST00000412570 MAGEA3P43357 314 aa9.71□□□□□ -0.86
SMPD4-203ENST00000412570 HSPA14Q0VDF9 509 aa9.71□□□□□ -0.86
SMPD4-203ENST00000412570 ITGA9Q13797 1035 aa9.71□□□□□ -0.86
SMPD4-203ENST00000412570 AGBL2Q5U5Z8 902 aa9.71□□□□□ -0.86
SMPD4-203ENST00000412570 PTRHD1Q6GMV3 140 aaKnown RBP9.71□□□□□ -0.86
SMPD4-203ENST00000412570 C4orf22Q6V702 233 aa9.71□□□□□ -0.86
SMPD4-203ENST00000412570 TMEM135Q86UB9 458 aa9.71□□□□□ -0.86
SMPD4-203ENST00000412570 GPR26Q8NDV2 337 aa9.71□□□□□ -0.86
SMPD4-203ENST00000412570 SNX19Q92543 992 aa9.71□□□□□ -0.86
SMPD4-203ENST00000412570 TLCD1Q96CP7 247 aa9.71□□□□□ -0.86
SMPD4-203ENST00000412570 TSNARE1Q96NA8 513 aa9.71□□□□□ -0.86
SMPD4-203ENST00000412570 HEPHQ9BQS7 1158 aa9.71□□□□□ -0.86
SMPD4-203ENST00000412570 FOXP3Q9BZS1 431 aa9.71□□□□□ -0.86
SMPD4-203ENST00000412570 ROPN1BQ9BZX4 212 aaPredicted RBP9.71□□□□□ -0.86
SMPD4-203ENST00000412570 ROPN1Q9HAT0 212 aaPredicted RBP9.71□□□□□ -0.86
SMPD4-203ENST00000412570 VPS45Q9NRW7 570 aa9.71□□□□□ -0.86
SMPD4-203ENST00000412570 SERGEFQ9UGK8 458 aa9.71□□□□□ -0.86
SMPD4-203ENST00000412570 C2orf16Q68DN1 1984 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 TRBV23OR9-2A0A075B6M9 112 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 RFPL1O75677 317 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 PGLSO95336 258 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 PAK4O96013 591 aaPredicted RBP9.7□□□□□ -0.86
SMPD4-203ENST00000412570 HTR7P34969 479 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 CD151P48509 253 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 CDKN2DP55273 166 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 CDH13P55290 713 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 USP4Q13107 963 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 PDAP1Q13442 181 aaKnown RBP9.7□□□□□ -0.86
SMPD4-203ENST00000412570 ITPRIPL2Q3MIP1 535 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 PRAMEF14Q5SWL7 426 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 PDE12Q6L8Q7 609 aaKnown RBP9.7□□□□□ -0.86
SMPD4-203ENST00000412570 CRTC3Q6UUV7 619 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 NUDCD3Q8IVD9 361 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 CPA6Q8N4T0 437 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 SNX31Q8N9S9 440 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 BRSK1Q8TDC3 778 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 FAM83CQ9BQN1 747 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 K7ESM1 405 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 EIF3HO15372 352 aaKnown RBP eCLIP9.7□□□□□ -0.864e-7■□□□□ 8.8
SMPD4-203ENST00000412570 PENKP01210 267 aaPredicted RBP9.7□□□□□ -0.86
SMPD4-203ENST00000412570 HLA-DPA1P20036 260 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 HOXA9P31269 272 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 OPRD1P41143 372 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 PDGFRLQ15198 375 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 UGP2Q16851 508 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 PDPK2PQ6A1A2 396 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 ANO7Q6IWH7 933 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 CPXM2Q8N436 756 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 TEX26Q8N6G2 289 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 OR14C36Q8NHC7 312 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 ANKRD49Q8WVL7 239 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 RNF31Q96EP0 1072 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 HBEGFQ99075 208 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 SLC30A3Q99726 388 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 EIF2B3Q9NR50 452 aaKnown RBP9.7□□□□□ -0.86
SMPD4-203ENST00000412570 LATS2Q9NRM7 1088 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 FBXL21Q9UKT6 434 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 CFAP20Q9Y6A4 193 aaKnown RBP9.7□□□□□ -0.86
SMPD4-203ENST00000412570 C16orf96A6NNT2 1141 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 SUN1O94901 812 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 KLF8O95600 359 aaPredicted RBP9.7□□□□□ -0.86
SMPD4-203ENST00000412570 ELFN1P0C7U0 828 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 MLNP12872 115 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 DDX6P26196 483 aaKnown RBP eCLIP9.7□□□□□ -0.862e-8■■■■■ 34.9
SMPD4-203ENST00000412570 IFT88Q13099 833 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 CRTC1Q6UUV9 634 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 RIPOR1Q6ZS17 1223 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 HSD11B1LQ7Z5J1 315 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 LRRC49Q8IUZ0 686 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 FAM160A2Q8N612 972 aaPredicted RBP9.7□□□□□ -0.86
SMPD4-203ENST00000412570 FEM1CQ96JP0 617 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 CCT8L2Q96SF2 557 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 UHRF1Q96T88 793 aaPredicted RBP9.7□□□□□ -0.86
SMPD4-203ENST00000412570 GPR21Q99679 349 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 RBBP8Q99708 897 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 RIOK2Q9BVS4 552 aaKnown RBP9.7□□□□□ -0.86
SMPD4-203ENST00000412570 UBE2ZQ9H832 354 aaPredicted RBP9.7□□□□□ -0.86
SMPD4-203ENST00000412570 DZANK1Q9NVP4 752 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 C2orf42Q9NWW7 574 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 IL36AQ9UHA7 158 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 TMEM98Q9Y2Y6 226 aa9.7□□□□□ -0.86
SMPD4-203ENST00000412570 FGF19O95750 216 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 HNRNPLP14866 589 aaKnown RBP eCLIP9.69□□□□□ -0.86
SMPD4-203ENST00000412570 STMN1P16949 149 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 CR2P20023 1033 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 ATP13A5Q4VNC0 1218 aa9.69□□□□□ -0.86
SMPD4-203ENST00000412570 PARS2Q7L3T8 475 aaKnown RBP9.69□□□□□ -0.86
SMPD4-203ENST00000412570 SDCCAG8Q86SQ7 713 aaPredicted RBP9.69□□□□□ -0.86
SMPD4-203ENST00000412570 ZC3HC1Q86WB0 502 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms