RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 NANPQ8TBE9 248 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 CA5BP1Q8WTZ4 195 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 RFFLQ8WZ73 363 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 ZNF845Q96IR2 970 aaPredicted RBP5.24□□□□□ -1.57
HERC4-205ENST00000412272 METTL22Q9BUU2 404 aaPredicted RBP5.24□□□□□ -1.57
HERC4-205ENST00000412272 CXorf21Q9HAI6 301 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 UFSP2Q9NUQ7 469 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 OLAHQ9NV23 265 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 EVA1BQ9NVM1 165 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 VSX1Q9NZR4 365 aaPredicted RBP5.24□□□□□ -1.57
HERC4-205ENST00000412272 TJP2Q9UDY2 1190 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 NAGPAQ9UK23 515 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 AMFRQ9UKV5 643 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 NAALADL1Q9UQQ1 740 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 SPATA31A3Q5VYP0 1347 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 A0A0B4J269 797 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 WRBO00258 174 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 ZBTB5O15062 677 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 PRKAB2O43741 272 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 OAZ2O95190 189 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 PFKMP08237 780 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 TMEM253P0C7T8 217 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 ACADMP11310 421 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 AOC1P19801 751 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 CPT1AP50416 773 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 KPNA2P52292 529 aaKnown RBP5.24□□□□□ -1.57
HERC4-205ENST00000412272 NRLP54845 237 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 RPL6Q02878 288 aaKnown RBP5.24□□□□□ -1.57
HERC4-205ENST00000412272 TNFAIP2Q03169 654 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 ZBTB16Q05516 673 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 ADAM15Q13444 863 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 KCNJ11Q14654 390 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 NKX1-1Q15270 411 aaPredicted RBP5.24□□□□□ -1.57
HERC4-205ENST00000412272 SIX1Q15475 284 aaPredicted RBP5.24□□□□□ -1.57
HERC4-205ENST00000412272 HADHQ16836 314 aaKnown RBP5.24□□□□□ -1.57
HERC4-205ENST00000412272 EIF2S3LQ2VIR3 472 aaKnown RBP5.24□□□□□ -1.57
HERC4-205ENST00000412272 INTS11Q5TA45 600 aaKnown RBP5.24□□□□□ -1.57
HERC4-205ENST00000412272 FAM109BQ6ICB4 259 aaPredicted RBP5.24□□□□□ -1.57
HERC4-205ENST00000412272 ZNF767PQ75MW2 155 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 NLRC3Q7RTR2 1065 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 HDDC2Q7Z4H3 204 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 ANKS1BQ7Z6G8 1248 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 HTR3CQ8WXA8 447 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 NPAS1Q99742 590 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 DBNDD2Q9BQY9 259 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 TTYH2Q9BSA4 534 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 SLC26A6Q9BXS9 759 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 GCOM2Q9BZD3 368 aaPredicted RBP5.24□□□□□ -1.57
HERC4-205ENST00000412272 TRPV4Q9HBA0 871 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 ERVK-5Q9HDB9 667 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 CABP5Q9NP86 173 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 AGPAT3Q9NRZ7 376 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 KCNK4Q9NYG8 393 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 WWOXQ9NZC7 414 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 APEX2Q9UBZ4 518 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 ZMYM5Q9UJ78 669 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 GNEQ9Y223 722 aaKnown RBP5.24□□□□□ -1.57
HERC4-205ENST00000412272 CICQ96RK0 1608 aaPredicted RBP5.24□□□□□ -1.57
HERC4-205ENST00000412272 PIPSLA2A3N6 862 aa5.23□□□□□ -1.57
HERC4-205ENST00000412272 MFSD2BA6NFX1 497 aa5.23□□□□□ -1.57
HERC4-205ENST00000412272 I3L521 148 aa5.23□□□□□ -1.57
HERC4-205ENST00000412272 SOCS7O14512 581 aa5.23□□□□□ -1.57
HERC4-205ENST00000412272 PPM1DO15297 605 aa5.23□□□□□ -1.57
HERC4-205ENST00000412272 LTN1O94822 1766 aa5.23□□□□□ -1.57
HERC4-205ENST00000412272 LDOC1O95751 146 aaPredicted RBP5.23□□□□□ -1.57
HERC4-205ENST00000412272 CSF1RP07333 972 aa5.23□□□□□ -1.57
HERC4-205ENST00000412272 NDUFB7P17568 137 aa5.23□□□□□ -1.57
HERC4-205ENST00000412272 NOS2P35228 1153 aa5.23□□□□□ -1.57
HERC4-205ENST00000412272 ARCN1P48444 511 aaKnown RBP5.23□□□□□ -1.57
HERC4-205ENST00000412272 PPM1FP49593 454 aaPredicted RBP5.23□□□□□ -1.57
HERC4-205ENST00000412272 TAS2R60P59551 318 aa5.23□□□□□ -1.57
HERC4-205ENST00000412272 ABCE1P61221 599 aaKnown RBP5.23□□□□□ -1.57
HERC4-205ENST00000412272 ZNF200P98182 395 aaPredicted RBP5.23□□□□□ -1.57
HERC4-205ENST00000412272 CYP24A1Q07973 514 aa5.23□□□□□ -1.57
HERC4-205ENST00000412272 NME3Q13232 169 aa5.23□□□□□ -1.57
HERC4-205ENST00000412272 PTK6Q13882 451 aa5.23□□□□□ -1.57
HERC4-205ENST00000412272 PPP2R5DQ14738 602 aa5.23□□□□□ -1.57
HERC4-205ENST00000412272 LRRC24Q50LG9 513 aa5.23□□□□□ -1.57
HERC4-205ENST00000412272 HECTD3Q5T447 861 aa5.23□□□□□ -1.57
HERC4-205ENST00000412272 RNF207Q6ZRF8 634 aa5.23□□□□□ -1.57
HERC4-205ENST00000412272 FJX1Q86VR8 437 aa5.23□□□□□ -1.57
HERC4-205ENST00000412272 PRELID2Q8N945 189 aa5.23□□□□□ -1.57
HERC4-205ENST00000412272 HEXDCQ8WVB3 486 aa5.23□□□□□ -1.57
HERC4-205ENST00000412272 BRI3BPQ8WY22 251 aa5.23□□□□□ -1.57
HERC4-205ENST00000412272 UPF1Q92900 1129 aaKnown RBP eCLIP5.23□□□□□ -1.57
HERC4-205ENST00000412272 RELTQ969Z4 430 aa5.23□□□□□ -1.57
HERC4-205ENST00000412272 VPS39Q96JC1 886 aa5.23□□□□□ -1.57
HERC4-205ENST00000412272 C9orf72Q96LT7 481 aa5.23□□□□□ -1.57
HERC4-205ENST00000412272 SYT11Q9BT88 431 aa5.23□□□□□ -1.57
HERC4-205ENST00000412272 NPLQ9BXD5 320 aaPredicted RBP5.23□□□□□ -1.57
HERC4-205ENST00000412272 RACGAP1Q9H0H5 632 aa5.23□□□□□ -1.57
HERC4-205ENST00000412272 COG4Q9H9E3 785 aa5.23□□□□□ -1.57
HERC4-205ENST00000412272 HMG20AQ9NP66 347 aa5.23□□□□□ -1.57
HERC4-205ENST00000412272 MTRRQ9UBK8 725 aa5.23□□□□□ -1.57
HERC4-205ENST00000412272 SCN11AQ9UI33 1791 aa5.23□□□□□ -1.57
HERC4-205ENST00000412272 VPS28Q9UK41 221 aa5.23□□□□□ -1.57
HERC4-205ENST00000412272 DHRS7Q9Y394 339 aa5.23□□□□□ -1.57
HERC4-205ENST00000412272 AP4S1Q9Y587 144 aa5.23□□□□□ -1.57
HERC4-205ENST00000412272 TNPO3Q9Y5L0 923 aaKnown RBP5.23□□□□□ -1.57
HERC4-205ENST00000412272 DUOX1Q9NRD9 1551 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms