RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 SELENOVP59797 346 aa4.13□□□□□ -1.75
RNU2-28P-201ENST00000410457 ROR1Q01973 937 aa4.13□□□□□ -1.75
RNU2-28P-201ENST00000410457 CXCL9Q07325 125 aa4.13□□□□□ -1.75
RNU2-28P-201ENST00000410457 SUPT20HL1Q3ZLR7 823 aa4.13□□□□□ -1.75
RNU2-28P-201ENST00000410457 C9orf152Q5JTZ5 239 aa4.13□□□□□ -1.75
RNU2-28P-201ENST00000410457 LRIF1Q5T3J3 769 aa4.13□□□□□ -1.75
RNU2-28P-201ENST00000410457 HIST2H2BCQ6DN03 193 aa4.13□□□□□ -1.75
RNU2-28P-201ENST00000410457 HIST2H2BDQ6DRA6 164 aa4.13□□□□□ -1.75
RNU2-28P-201ENST00000410457 METTL2BQ6P1Q9 378 aaKnown RBP4.13□□□□□ -1.75
RNU2-28P-201ENST00000410457 PARM1Q6UWI2 310 aa4.13□□□□□ -1.75
RNU2-28P-201ENST00000410457 TRAPPC11Q7Z392 1133 aa4.13□□□□□ -1.75
RNU2-28P-201ENST00000410457 CACNA2D4Q7Z3S7 1137 aa4.13□□□□□ -1.75
RNU2-28P-201ENST00000410457 YTHDF3Q7Z739 585 aaKnown RBP4.13□□□□□ -1.75
RNU2-28P-201ENST00000410457 CNGA4Q8IV77 575 aa4.13□□□□□ -1.75
RNU2-28P-201ENST00000410457 APPL2Q8NEU8 664 aa4.13□□□□□ -1.75
RNU2-28P-201ENST00000410457 ENGASEQ8NFI3 743 aa4.13□□□□□ -1.75
RNU2-28P-201ENST00000410457 NSMCE1Q8WV22 266 aa4.13□□□□□ -1.75
RNU2-28P-201ENST00000410457 ZNF622Q969S3 477 aaKnown RBP eCLIP4.13□□□□□ -1.75
RNU2-28P-201ENST00000410457 METTL2AQ96IZ6 378 aaKnown RBP4.13□□□□□ -1.75
RNU2-28P-201ENST00000410457 GFM1Q96RP9 751 aaKnown RBP4.13□□□□□ -1.75
RNU2-28P-201ENST00000410457 TRMOQ9BU70 441 aa4.13□□□□□ -1.75
RNU2-28P-201ENST00000410457 KLHL4Q9C0H6 718 aa4.13□□□□□ -1.75
RNU2-28P-201ENST00000410457 NDST4Q9H3R1 872 aa4.13□□□□□ -1.75
RNU2-28P-201ENST00000410457 ESRP2Q9H6T0 727 aaKnown RBP4.13□□□□□ -1.75
RNU2-28P-201ENST00000410457 MAGIXQ9H6Y5 334 aa4.13□□□□□ -1.75
RNU2-28P-201ENST00000410457 ERVMER34-1Q9H9K5 563 aa4.13□□□□□ -1.75
RNU2-28P-201ENST00000410457 ZCCHC17Q9NP64 241 aaKnown RBP4.13□□□□□ -1.75
RNU2-28P-201ENST00000410457 FZD3Q9NPG1 666 aa4.13□□□□□ -1.75
RNU2-28P-201ENST00000410457 HINT3Q9NQE9 182 aaKnown RBP4.13□□□□□ -1.75
RNU2-28P-201ENST00000410457 ARHGEF38Q9NXL2 777 aa4.13□□□□□ -1.75
RNU2-28P-201ENST00000410457 PPIEQ9UNP9 301 aaKnown RBP4.13□□□□□ -1.75
RNU2-28P-201ENST00000410457 SRPRBQ9Y5M8 271 aaKnown RBP4.13□□□□□ -1.75
RNU2-28P-201ENST00000410457 hCG_1809904A0A1W2PP81 198 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 A0A1W2PPE2 198 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 A0A1W2PR64 198 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 LNP1A1A4G5 178 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 C1orf226A1L170 272 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 A8MXE2 369 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 VCYO14598 125 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 ATP2A1O14983 1001 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 ADAMDEC1O15204 470 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 FSHBP01225 129 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 RPN1P04843 607 aaKnown RBP4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 TPOP07202 933 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 ABCB1P08183 1280 aaPredicted RBP4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 MAOAP21397 527 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 UBA1P22314 1058 aaKnown RBP4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 CAPZA2P47755 286 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 GPR143P51810 404 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 RAD23AP54725 363 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 UBXN2AP68543 259 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 GRAPQ13588 217 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 LAMB3Q13751 1172 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 KCNC3Q14003 757 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 NEDD9Q14511 834 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 TRIP6Q15654 476 aaKnown RBP4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 ALDH1L2Q3SY69 923 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 GGNBP1Q5YKI7 109 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 ANKRD54Q6NXT1 300 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 SLC16A12Q6ZSM3 486 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 DENND5BQ6ZUT9 1274 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 ARID3BQ8IVW6 561 aaPredicted RBP4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 GPT2Q8TD30 523 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 TMCO6Q96DC7 493 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 PGAP3Q96FM1 320 aaPredicted RBP4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 CEP295NLQ96MC4 621 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 TTC14Q96N46 770 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 PAFAH2Q99487 392 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 SH3GL2Q99962 352 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 PCGF1Q9BSM1 259 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 EDEM3Q9BZQ6 932 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 DENND2DQ9H6A0 471 aaPredicted RBP4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 WDR26Q9H7D7 661 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 GPR108Q9NPR9 543 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 DECR2Q9NUI1 292 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 MTMR10Q9NXD2 777 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 ANAPC2Q9UJX6 822 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 NOL7Q9UMY1 257 aaKnown RBP4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 COG5Q9UP83 839 aa4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 R3HDM2Q9Y2K5 976 aaKnown RBP4.12□□□□□ -1.75
RNU2-28P-201ENST00000410457 LOC102723996A0A087X1L8 192 aa4.11□□□□□ -1.75
RNU2-28P-201ENST00000410457 A0A1B0GVM2 712 aa4.11□□□□□ -1.75
RNU2-28P-201ENST00000410457 TCRBV21S2A2A0A5A6 115 aa4.11□□□□□ -1.75
RNU2-28P-201ENST00000410457 KANSL1LA0AUZ9 987 aa4.11□□□□□ -1.75
RNU2-28P-201ENST00000410457 KCNU1A8MYU2 1149 aa4.11□□□□□ -1.75
RNU2-28P-201ENST00000410457 ADAM10O14672 748 aa4.11□□□□□ -1.75
RNU2-28P-201ENST00000410457 LDB2O43679 373 aa4.11□□□□□ -1.75
RNU2-28P-201ENST00000410457 ZC3H11AO75152 810 aaKnown RBP eCLIP4.11□□□□□ -1.75
RNU2-28P-201ENST00000410457 TBX10O75333 385 aa4.11□□□□□ -1.75
RNU2-28P-201ENST00000410457 SLPIP03973 132 aa4.11□□□□□ -1.75
RNU2-28P-201ENST00000410457 MMP9P14780 707 aa4.11□□□□□ -1.75
RNU2-28P-201ENST00000410457 PPP5CP53041 499 aa4.11□□□□□ -1.75
RNU2-28P-201ENST00000410457 ZP1P60852 638 aa4.11□□□□□ -1.75
RNU2-28P-201ENST00000410457 PNLIPRP3Q17RR3 467 aa4.11□□□□□ -1.75
RNU2-28P-201ENST00000410457 PPP6R3Q5H9R7 873 aaPredicted RBP4.11□□□□□ -1.75
RNU2-28P-201ENST00000410457 C1orf141Q5JVX7 400 aa4.11□□□□□ -1.75
RNU2-28P-201ENST00000410457 DAB2IPQ5VWQ8 1189 aa4.11□□□□□ -1.75
RNU2-28P-201ENST00000410457 SIGIRRQ6IA17 410 aa4.11□□□□□ -1.75
RNU2-28P-201ENST00000410457 PIP4P1Q86T03 277 aa4.11□□□□□ -1.75
RNU2-28P-201ENST00000410457 VSIG1Q86XK7 387 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms