RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 CD248Q9HCU0 757 aa9.08□□□□□ -0.96
PBRM1-208ENST00000410007 SPAG4Q9NPE6 437 aa9.08□□□□□ -0.96
PBRM1-208ENST00000410007 VPS4AQ9UN37 437 aa9.08□□□□□ -0.96
PBRM1-208ENST00000410007 ROBO1Q9Y6N7 1651 aa9.08□□□□□ -0.96
PBRM1-208ENST00000410007 PEX1O43933 1283 aa9.08□□□□□ -0.96
PBRM1-208ENST00000410007 ZCCHC18P0CG32 403 aa9.08□□□□□ -0.96
PBRM1-208ENST00000410007 HNRNPLP14866 589 aaKnown RBP eCLIP9.08□□□□□ -0.96
PBRM1-208ENST00000410007 WASP42768 502 aa9.08□□□□□ -0.96
PBRM1-208ENST00000410007 GPD2P43304 727 aa9.08□□□□□ -0.96
PBRM1-208ENST00000410007 SP2Q02086 613 aa9.08□□□□□ -0.96
PBRM1-208ENST00000410007 INO80DQ53TQ3 878 aaPredicted RBP9.08□□□□□ -0.96
PBRM1-208ENST00000410007 GATAD2AQ86YP4 633 aa9.08□□□□□ -0.96
PBRM1-208ENST00000410007 C10orf107Q8IVU9 208 aa9.08□□□□□ -0.96
PBRM1-208ENST00000410007 SPATA6LQ8N4H0 392 aa9.08□□□□□ -0.96
PBRM1-208ENST00000410007 ZBTB2Q8N680 514 aa9.08□□□□□ -0.96
PBRM1-208ENST00000410007 OR14C36Q8NHC7 312 aa9.08□□□□□ -0.96
PBRM1-208ENST00000410007 PTCD3Q96EY7 689 aaKnown RBP9.08□□□□□ -0.96
PBRM1-208ENST00000410007 TCF12Q99081 682 aa9.08□□□□□ -0.96
PBRM1-208ENST00000410007 FANCEQ9HB96 536 aa9.08□□□□□ -0.96
PBRM1-208ENST00000410007 DNAJC11Q9NVH1 559 aa9.08□□□□□ -0.96
PBRM1-208ENST00000410007 IRAK2O43187 625 aa9.08□□□□□ -0.96
PBRM1-208ENST00000410007 AOC2O75106 756 aa9.08□□□□□ -0.96
PBRM1-208ENST00000410007 ERAL1O75616 437 aaKnown RBP9.08□□□□□ -0.96
PBRM1-208ENST00000410007 BPGMP07738 259 aa9.08□□□□□ -0.96
PBRM1-208ENST00000410007 HSMCR30P0CW71 290 aa9.08□□□□□ -0.96
PBRM1-208ENST00000410007 CCL5P13501 91 aa9.08□□□□□ -0.96
PBRM1-208ENST00000410007 ITGA2P17301 1181 aa9.08□□□□□ -0.96
PBRM1-208ENST00000410007 TSPAN8P19075 237 aa9.08□□□□□ -0.96
PBRM1-208ENST00000410007 SERPINB1P30740 379 aa9.08□□□□□ -0.96
PBRM1-208ENST00000410007 RFTN1Q14699 578 aaPredicted RBP9.08□□□□□ -0.96
PBRM1-208ENST00000410007 TRIM40Q6P9F5 258 aa9.08□□□□□ -0.96
PBRM1-208ENST00000410007 DRICH1Q6PGQ1 229 aaPredicted RBP9.08□□□□□ -0.96
PBRM1-208ENST00000410007 ANKS1BQ7Z6G8 1248 aa9.08□□□□□ -0.96
PBRM1-208ENST00000410007 GPR135Q8IZ08 494 aa9.08□□□□□ -0.96
PBRM1-208ENST00000410007 RMND5BQ96G75 393 aaPredicted RBP9.08□□□□□ -0.96
PBRM1-208ENST00000410007 CHRAC1Q9NRG0 131 aa9.08□□□□□ -0.96
PBRM1-208ENST00000410007 CNTN3Q9P232 1028 aa9.08□□□□□ -0.96
PBRM1-208ENST00000410007 ADAM30Q9UKF2 790 aa9.08□□□□□ -0.96
PBRM1-208ENST00000410007 TRAF6Q9Y4K3 522 aa9.08□□□□□ -0.96
PBRM1-208ENST00000410007 DUOX1Q9NRD9 1551 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 TK2O00142 265 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 PIAS1O75925 651 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 PRAMEF1O95521 474 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 VIPP01282 170 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 SERPINA6P08185 405 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 NR2F1P10589 423 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 UNGP13051 313 aaPredicted RBP9.07□□□□□ -0.96
PBRM1-208ENST00000410007 MYL12AP19105 171 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 CRHR1P34998 444 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 BNIP2Q12982 314 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 GPM6BQ13491 265 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 FNBP1LQ5T0N5 605 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 SCIMPQ6UWF3 145 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 DSELQ8IZU8 1212 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 PYROXD2Q8N2H3 581 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 FBXO30Q8TB52 745 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 TBATAQ96M53 351 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 FBXL18Q96ME1 805 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 TTLL2Q9BWV7 592 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 TNKS2Q9H2K2 1166 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 RIBC2Q9H4K1 309 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 CAB39LQ9H9S4 337 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 TLR6Q9Y2C9 796 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 RFC2P35250 354 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 TALDO1P37837 337 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 CDH13P55290 713 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 ILF3Q12906 894 aaKnown RBP eCLIP9.07□□□□□ -0.96
PBRM1-208ENST00000410007 TAF5Q15542 800 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 ALG11Q2TAA5 492 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 GALNT13Q8IUC8 556 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 SRFBP1Q8NEF9 429 aaKnown RBP9.07□□□□□ -0.96
PBRM1-208ENST00000410007 ACDQ96AP0 544 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 ITCHQ96J02 903 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 PANX1Q96RD7 426 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 ACAT2Q9BWD1 397 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 CDH19Q9H159 772 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 ABCG4Q9H172 646 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 RERGLQ9H628 205 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 SIX2Q9NPC8 291 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 PCDHGC4Q9Y5F7 938 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 ZNF780BQ9Y6R6 833 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 FAM208AQ9UK61 1670 aaKnown RBP9.07□□□□□ -0.96
PBRM1-208ENST00000410007 SPEF2Q9C093 1822 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 NALCNQ8IZF0 1738 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 STK16O75716 305 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 SMNDC1O75940 238 aaKnown RBP eCLIP9.07□□□□□ -0.96
PBRM1-208ENST00000410007 PDE9AO76083 593 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 CCDC159P0C7I6 412 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 KCNE1P15382 129 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 PSMB9P28065 219 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 SSR2P43308 183 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 KRR1Q13601 381 aaKnown RBP9.07□□□□□ -0.96
PBRM1-208ENST00000410007 TSNQ15631 228 aaKnown RBP9.07□□□□□ -0.96
PBRM1-208ENST00000410007 CDCA2Q69YH5 1023 aaPredicted RBP9.07□□□□□ -0.96
PBRM1-208ENST00000410007 GCNT7Q6ZNI0 430 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 CLEC20AQ6ZU45 233 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 ZNF605Q86T29 641 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 CUZD1Q86UP6 607 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 EPHX4Q8IUS5 362 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 FAM20CQ8IXL6 584 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms