RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 ANPEPP15144 967 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 SELPP16109 830 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 ACADSP16219 412 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 C2orf80Q0P641 193 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 ZCWPW2Q504Y3 356 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 ANO7Q6IWH7 933 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 RTL4Q6ZR62 310 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 CDH24Q86UP0 819 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 ZDHHC13Q8IUH4 622 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 RADILQ96JH8 1075 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 UROC1Q96N76 676 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 ABCB8Q9NUT2 735 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 MAGEB16A2A368 324 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 ASNA1O43681 348 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 MMAAQ8IVH4 418 aaKnown RBP8.41□□□□□ -1.06
SCN9A-203ENST00000409672 NLGN4YQ8NFZ3 816 aaPredicted RBP8.41□□□□□ -1.06
SCN9A-203ENST00000409672 NELL1Q92832 810 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 SLC38A2Q96QD8 506 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 WDR77Q9BQA1 342 aaPredicted RBP8.41□□□□□ -1.06
SCN9A-203ENST00000409672 CLN6Q9NWW5 311 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 BPNT1O95861 308 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 TYRP1P17643 537 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 DDX6P26196 483 aaKnown RBP eCLIP8.41□□□□□ -1.06
SCN9A-203ENST00000409672 USP46P62068 366 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 BNIP1Q12981 228 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 TRAF3Q13114 568 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 ACAP1Q15027 740 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 MED22Q15528 200 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 CHSY3Q70JA7 882 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 PSTKQ8IV42 348 aaKnown RBP8.41□□□□□ -1.06
SCN9A-203ENST00000409672 STK40Q8N2I9 435 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 SLC4A11Q8NBS3 891 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 PPCDCQ96CD2 204 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 TNFRSF10BO14763 440 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 SIN3BO75182 1162 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 NFATC1O95644 943 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 TLR1Q15399 786 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 ZBTB6Q15916 424 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 FAM187BQ17R55 369 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 PLEKHG4Q58EX7 1191 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 ARSIQ5FYB1 569 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 SLC26A11Q86WA9 606 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 DDHD1Q8NEL9 900 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 WNT8BQ93098 351 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 OMA1Q96E52 524 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 MYO19Q96H55 970 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 HIST1H2AAQ96QV6 131 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 TRMT61BQ9BVS5 477 aaKnown RBP8.41□□□□□ -1.06
SCN9A-203ENST00000409672 ETNK2Q9NVF9 386 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 PADI3Q9ULW8 664 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 CAPN6Q9Y6Q1 641 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 CCT8L1PA6NM43 557 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 MAGEC1O60732 1142 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 PGM3O95394 542 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 CRYBB1P53674 252 aaPredicted RBP8.41□□□□□ -1.06
SCN9A-203ENST00000409672 SNX32Q86XE0 403 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 KLHL32Q96NJ5 620 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 COPS4Q9BT78 406 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 TULP4Q9NRJ4 1543 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 MYOCOSA0A1B0GUC4 107 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 PROSCO94903 275 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 CDK14O94921 469 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 PIGNO95427 931 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 C22orf31O95567 290 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 ZNF16P17020 682 aaPredicted RBP8.4□□□□□ -1.06
SCN9A-203ENST00000409672 GRIA3P42263 894 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 PLA2G16P53816 162 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 DLG1Q12959 904 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 MAPKAPK3Q16644 382 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 NDUFA9Q16795 377 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 ERCC6L2Q5T890 1561 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 METTL3Q86U44 580 aaKnown RBP8.4□□□□□ -1.06
SCN9A-203ENST00000409672 C17orf64Q86WR6 236 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 ACTRT2Q8TDY3 377 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 AP2M1Q96CW1 435 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 CCL22O00626 93 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 MRASO14807 208 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 FOXP2O15409 715 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 TFEBP19484 476 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 MAGP20916 626 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 TKTP29401 623 aaKnown RBP8.4□□□□□ -1.06
SCN9A-203ENST00000409672 TTPAP49638 278 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 CCDC153Q494R4 210 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 ATXN7L2Q5T6C5 722 aaPredicted RBP8.4□□□□□ -1.06
SCN9A-203ENST00000409672 TAPT1Q6NXT6 567 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 ARHGAP36Q6ZRI8 547 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 LPCAT2Q7L5N7 544 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 PIGZQ86VD9 579 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 TTC29Q8NA56 475 aaPredicted RBP8.4□□□□□ -1.06
SCN9A-203ENST00000409672 PYDC1Q8WXC3 89 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 MAGEB18Q96M61 343 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 LPIN3Q9BQK8 851 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 UGT2B28Q9BY64 529 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 ZNF490Q9ULM2 529 aaPredicted RBP8.4□□□□□ -1.06
SCN9A-203ENST00000409672 PLCL2Q9UPR0 1127 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 FSHRP23945 695 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 ICAM3P32942 547 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 STARP49675 285 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 MRPS22P82650 360 aaKnown RBP8.4□□□□□ -1.06
SCN9A-203ENST00000409672 DACT2Q5SW24 774 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms