RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 BTBD2Q9BX70 525 aa5.84□□□□□ -1.48
R3HDM1-202ENST00000409478 RPRD1BQ9NQG5 326 aaKnown RBP5.84□□□□□ -1.48
R3HDM1-202ENST00000409478 ACSS2Q9NR19 701 aa5.84□□□□□ -1.48
R3HDM1-202ENST00000409478 DTLQ9NZJ0 730 aa5.84□□□□□ -1.48
R3HDM1-202ENST00000409478 XPR1Q9UBH6 696 aa5.84□□□□□ -1.48
R3HDM1-202ENST00000409478 XIRP1Q702N8 1843 aaKnown RBP5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 A0A0J9YYE9 177 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 TEX51A0A1B0GUA7 166 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 CST3P01034 146 aaPredicted RBP5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 PSAPP07602 524 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 YES1P07947 543 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 TRAPPC2P0DI81 140 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 TRAPPC2BP0DI82 140 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 CTRB1P17538 263 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 S100A5P33763 92 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 HTR3AP46098 478 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 ST13P50502 369 aaKnown RBP5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 ACTR2P61160 394 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 VBP1P61758 197 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 CDO1Q16878 200 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 ZNF699Q32M78 642 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 ZNF404Q494X3 552 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 CATSPEREQ5SY80 951 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 SH3PXD2AQ5TCZ1 1133 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 CTRB2Q6GPI1 263 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 SYCE2Q6PIF2 218 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 BEND5Q7L4P6 421 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 KCNMB4Q86W47 210 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 CCDC185Q8N715 623 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 BEND7Q8N7W2 519 aaPredicted RBP5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 FAR1Q8WVX9 515 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 FCRL3Q96P31 734 aaPredicted RBP5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 AGAP2Q99490 1192 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 SLC30A3Q99726 388 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 MCMBPQ9BTE3 642 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 SNRNP25Q9BV90 132 aaKnown RBP5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 GON7Q9BXV9 100 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 CCDC90BQ9GZT6 254 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 FAM49AQ9H0Q0 323 aaPredicted RBP5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 POLR3FQ9H1D9 316 aaPredicted RBP5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 ALG2Q9H553 416 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 ADPRHL2Q9NX46 363 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 IL37Q9NZH6 218 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 BFARQ9NZS9 450 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 PCDHB3Q9Y5E6 796 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 PCDHGA8Q9Y5G5 932 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 QSER1Q2KHR3 1735 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 TYW5A2RUC4 315 aaKnown RBP5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 SNTNA6NMZ2 147 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 ZBBXA8MT70 800 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 SLC1A7O00341 560 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 SHOXO15266 292 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 TSPAN9O75954 239 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 SUPT7LO94864 414 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 SNX4O95219 450 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 ATP5F1P24539 256 aaPredicted RBP5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 ASPAP45381 313 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 GLRBP48167 497 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 PRIM2P49643 509 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 AP2S1P53680 142 aaPredicted RBP5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 TGFB2P61812 414 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 GBE1Q04446 702 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 PRKCDQ05655 676 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 TRAF3Q13114 568 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 IL18R1Q13478 541 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 USP10Q14694 798 aaKnown RBP5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 SURF1Q15526 300 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 TBPL2Q6SJ96 375 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 CES3Q6UWW8 571 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 HHIPL2Q6UWX4 724 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 STRADAQ7RTN6 431 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 BRSK2Q8IWQ3 736 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 UBQLNLQ8IYU4 475 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 METTL4Q8N3J2 472 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 BPIFB1Q8TDL5 484 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 CHURC1Q8WUH1 139 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 ASB2Q96Q27 587 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 MRPL57Q9BQC6 102 aaKnown RBP5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 ZNF717Q9BY31 904 aaPredicted RBP5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 ATP13A2Q9NQ11 1180 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 FAM118AQ9NWS6 357 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 CMTM6Q9NX76 183 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 NARFQ9UHQ1 456 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 ACOT9Q9Y305 439 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 CCDC154A6NI56 674 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 NR5A2O00482 541 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 SPNP16150 400 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 SLC6A2P23975 617 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 UGT2B10P36537 528 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 NDST1P52848 882 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 ATN1P54259 1190 aaPredicted RBP5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 C1QTNF8P60827 252 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 RACK1P63244 317 aaKnown RBP5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 TAGLNQ01995 201 aaKnown RBP5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 MVKQ03426 396 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 EMX1Q04741 257 aaPredicted RBP5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 RAD51Q06609 339 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 FADDQ13158 208 aa5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 SMAD1Q15797 465 aaKnown RBP5.83□□□□□ -1.48
R3HDM1-202ENST00000409478 MEP1AQ16819 746 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms