RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 GOLGA6BA6NDN3 693 aa19.81■□□□□ 0.76
PDLIM2-207ENST00000409417 K7ESM1 405 aa19.81■□□□□ 0.76
PDLIM2-207ENST00000409417 CES2O00748 559 aa19.81■□□□□ 0.76
PDLIM2-207ENST00000409417 AGTP01019 485 aa19.81■□□□□ 0.76
PDLIM2-207ENST00000409417 IFNB1P01574 187 aa19.81■□□□□ 0.76
PDLIM2-207ENST00000409417 FGF1P05230 155 aa19.81■□□□□ 0.76
PDLIM2-207ENST00000409417 HOXC4P09017 264 aaPredicted RBP19.81■□□□□ 0.76
PDLIM2-207ENST00000409417 GOLGA6DP0CG33 693 aa19.81■□□□□ 0.76
PDLIM2-207ENST00000409417 TSHRP16473 764 aa19.81■□□□□ 0.76
PDLIM2-207ENST00000409417 CSRP1P21291 193 aaKnown RBP19.81■□□□□ 0.76
PDLIM2-207ENST00000409417 HTR1BP28222 390 aa19.81■□□□□ 0.76
PDLIM2-207ENST00000409417 EPHA8P29322 1005 aaPredicted RBP19.81■□□□□ 0.76
PDLIM2-207ENST00000409417 ADRA1AP35348 466 aa19.81■□□□□ 0.76
PDLIM2-207ENST00000409417 CHRNA4P43681 627 aa19.81■□□□□ 0.76
PDLIM2-207ENST00000409417 IL9RQ01113 521 aa19.81■□□□□ 0.76
PDLIM2-207ENST00000409417 MACC1Q6ZN28 852 aa19.81■□□□□ 0.76
PDLIM2-207ENST00000409417 RFLNAQ6ZTI6 216 aa19.81■□□□□ 0.76
PDLIM2-207ENST00000409417 PELI3Q8N2H9 469 aa19.81■□□□□ 0.76
PDLIM2-207ENST00000409417 SLC25A41Q8N5S1 370 aa19.81■□□□□ 0.76
PDLIM2-207ENST00000409417 PRELID2Q8N945 189 aa19.81■□□□□ 0.76
PDLIM2-207ENST00000409417 SAP25Q8TEE9 199 aa19.81■□□□□ 0.76
PDLIM2-207ENST00000409417 AP2M1Q96CW1 435 aa19.81■□□□□ 0.76
PDLIM2-207ENST00000409417 EID2BQ96D98 161 aa19.81■□□□□ 0.76
PDLIM2-207ENST00000409417 MS4A14Q96JA4 679 aa19.81■□□□□ 0.76
PDLIM2-207ENST00000409417 WDR24Q96S15 920 aa19.81■□□□□ 0.76
PDLIM2-207ENST00000409417 FICDQ9BVA6 458 aa19.81■□□□□ 0.76
PDLIM2-207ENST00000409417 WDR26Q9H7D7 661 aa19.81■□□□□ 0.76
PDLIM2-207ENST00000409417 DNAJC28Q9NX36 388 aa19.81■□□□□ 0.76
PDLIM2-207ENST00000409417 GOLGA6AQ9NYA3 693 aa19.81■□□□□ 0.76
PDLIM2-207ENST00000409417 SHOC2Q9UQ13 582 aa19.81■□□□□ 0.76
PDLIM2-207ENST00000409417 ZNF711Q9Y462 761 aa19.81■□□□□ 0.76
PDLIM2-207ENST00000409417 PGRMC1O00264 195 aaKnown RBP19.8■□□□□ 0.76
PDLIM2-207ENST00000409417 METTL18O95568 372 aa19.8■□□□□ 0.76
PDLIM2-207ENST00000409417 NME1P15531 152 aaKnown RBP19.8■□□□□ 0.76
PDLIM2-207ENST00000409417 TEAD1P28347 426 aa19.8■□□□□ 0.76
PDLIM2-207ENST00000409417 ACTN2P35609 894 aa19.8■□□□□ 0.76
PDLIM2-207ENST00000409417 SPINT3P49223 89 aa19.8■□□□□ 0.76
PDLIM2-207ENST00000409417 NFATC4Q14934 902 aa19.8■□□□□ 0.76
PDLIM2-207ENST00000409417 TMC3Q7Z5M5 1100 aa19.8■□□□□ 0.76
PDLIM2-207ENST00000409417 CCDC89Q8N998 374 aa19.8■□□□□ 0.76
PDLIM2-207ENST00000409417 ACTRT1Q8TDG2 376 aa19.8■□□□□ 0.76
PDLIM2-207ENST00000409417 GPR63Q9BZJ6 419 aa19.8■□□□□ 0.76
PDLIM2-207ENST00000409417 ABCG8Q9H221 673 aa19.8■□□□□ 0.76
PDLIM2-207ENST00000409417 TRABDQ9H4I3 376 aa19.8■□□□□ 0.76
PDLIM2-207ENST00000409417 PKD2L2Q9NZM6 624 aa19.8■□□□□ 0.76
PDLIM2-207ENST00000409417 HACD3Q9P035 362 aa19.8■□□□□ 0.76
PDLIM2-207ENST00000409417 SPO11Q9Y5K1 396 aa19.8■□□□□ 0.76
PDLIM2-207ENST00000409417 PCNX2A6NKB5 2137 aa19.8■□□□□ 0.76
PDLIM2-207ENST00000409417 CACNA1AO00555 2505 aa19.8■□□□□ 0.76
PDLIM2-207ENST00000409417 TMEM131Q92545 1883 aa19.8■□□□□ 0.76
PDLIM2-207ENST00000409417 CACNB4O00305 520 aaPredicted RBP19.79■□□□□ 0.76
PDLIM2-207ENST00000409417 FLRT2O43155 660 aa19.79■□□□□ 0.76
PDLIM2-207ENST00000409417 SH3BP5O60239 455 aa19.79■□□□□ 0.76
PDLIM2-207ENST00000409417 CSF2P04141 144 aa19.79■□□□□ 0.76
PDLIM2-207ENST00000409417 KIAA1024LP59773 190 aa19.79■□□□□ 0.76
PDLIM2-207ENST00000409417 EIF2B5Q13144 721 aaKnown RBP19.79■□□□□ 0.76
PDLIM2-207ENST00000409417 ZNF542PQ5EBM4 170 aa19.79■□□□□ 0.76
PDLIM2-207ENST00000409417 KCTD11Q693B1 232 aa19.79■□□□□ 0.76
PDLIM2-207ENST00000409417 NAXDQ8IW45 347 aa19.79■□□□□ 0.76
PDLIM2-207ENST00000409417 SCAMP4Q969E2 229 aa19.79■□□□□ 0.76
PDLIM2-207ENST00000409417 FUBP1Q96AE4 644 aaKnown RBP19.79■□□□□ 0.76
PDLIM2-207ENST00000409417 LRRC45Q96CN5 670 aa19.79■□□□□ 0.76
PDLIM2-207ENST00000409417 TEX101Q9BY14 249 aa19.79■□□□□ 0.76
PDLIM2-207ENST00000409417 CDH19Q9H159 772 aa19.79■□□□□ 0.76
PDLIM2-207ENST00000409417 SLC32A1Q9H598 525 aa19.79■□□□□ 0.76
PDLIM2-207ENST00000409417 CD84Q9UIB8 345 aa19.79■□□□□ 0.76
PDLIM2-207ENST00000409417 PDE2AO00408 941 aaPredicted RBP19.79■□□□□ 0.76
PDLIM2-207ENST00000409417 PYGLP06737 847 aa19.79■□□□□ 0.76
PDLIM2-207ENST00000409417 TCP1P17987 556 aaKnown RBP19.79■□□□□ 0.76
PDLIM2-207ENST00000409417 HMGCLP35914 325 aa19.79■□□□□ 0.76
PDLIM2-207ENST00000409417 HNRNPKP61978 463 aaKnown RBP eCLIP19.79■□□□□ 0.76
PDLIM2-207ENST00000409417 BNIP3Q12983 259 aa19.79■□□□□ 0.76
PDLIM2-207ENST00000409417 RAET1GQ6H3X3 334 aa19.79■□□□□ 0.76
PDLIM2-207ENST00000409417 GATAD2AQ86YP4 633 aa19.79■□□□□ 0.76
PDLIM2-207ENST00000409417 ATL2Q8NHH9 583 aa19.79■□□□□ 0.76
PDLIM2-207ENST00000409417 SETD7Q8WTS6 366 aaKnown RBP19.79■□□□□ 0.76
PDLIM2-207ENST00000409417 TBL1YQ9BQ87 522 aa19.79■□□□□ 0.76
PDLIM2-207ENST00000409417 RIOK2Q9BVS4 552 aaKnown RBP19.79■□□□□ 0.76
PDLIM2-207ENST00000409417 FAM83DQ9H4H8 585 aa19.79■□□□□ 0.76
PDLIM2-207ENST00000409417 LRRC40Q9H9A6 602 aa19.79■□□□□ 0.76
PDLIM2-207ENST00000409417 ARNT2Q9HBZ2 717 aa19.79■□□□□ 0.76
PDLIM2-207ENST00000409417 RAD18Q9NS91 495 aa19.79■□□□□ 0.76
PDLIM2-207ENST00000409417 KLF15Q9UIH9 416 aa19.79■□□□□ 0.76
PDLIM2-207ENST00000409417 AURKAO14965 403 aa19.78■□□□□ 0.76
PDLIM2-207ENST00000409417 PSMD3O43242 534 aa19.78■□□□□ 0.76
PDLIM2-207ENST00000409417 PIAS2O75928 621 aa19.78■□□□□ 0.76
PDLIM2-207ENST00000409417 SOD1P00441 154 aa19.78■□□□□ 0.76
PDLIM2-207ENST00000409417 MYCLP1P12525 358 aaPredicted RBP19.78■□□□□ 0.76
PDLIM2-207ENST00000409417 CEACAM1P13688 526 aa19.78■□□□□ 0.76
PDLIM2-207ENST00000409417 KELP23276 732 aa19.78■□□□□ 0.76
PDLIM2-207ENST00000409417 FDFT1P37268 417 aa19.78■□□□□ 0.76
PDLIM2-207ENST00000409417 GRK6P43250 576 aa19.78■□□□□ 0.76
PDLIM2-207ENST00000409417 GPR1P46091 355 aa19.78■□□□□ 0.76
PDLIM2-207ENST00000409417 OLIG2Q13516 323 aa19.78■□□□□ 0.76
PDLIM2-207ENST00000409417 SPARCL1Q14515 664 aa19.78■□□□□ 0.76
PDLIM2-207ENST00000409417 INAVAQ3KP66 663 aa19.78■□□□□ 0.76
PDLIM2-207ENST00000409417 PAPD7Q5XG87 772 aaKnown RBP19.78■□□□□ 0.76
PDLIM2-207ENST00000409417 ADAMTSL4Q6UY14 1074 aa19.78■□□□□ 0.76
PDLIM2-207ENST00000409417 KANSL1Q7Z3B3 1105 aa19.78■□□□□ 0.76
PDLIM2-207ENST00000409417 HEATR4Q86WZ0 1026 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms