RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 ITPKAP23677 461 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 ITPKBP27987 946 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 GYS2P54840 703 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 RAB10P61026 200 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 AGKQ53H12 422 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 FGD3Q5JSP0 725 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 ZCCHC9Q8N567 271 aaKnown RBP5.01□□□□□ -1.61
SCN3A-203ENST00000409101 ST13P5Q8NFI4 369 aaPredicted RBP5.01□□□□□ -1.61
SCN3A-203ENST00000409101 TNFRSF25Q93038 417 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 CSPG4P5Q96PW8 444 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 AARSD1Q9BTE6 412 aaKnown RBP5.01□□□□□ -1.61
SCN3A-203ENST00000409101 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.01□□□□□ -1.61
SCN3A-203ENST00000409101 NMUR1Q9HB89 426 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 NEK6Q9HC98 313 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 MRPS30Q9NP92 439 aaKnown RBP5.01□□□□□ -1.61
SCN3A-203ENST00000409101 LZTS1Q9Y250 596 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 NDUFAF1Q9Y375 327 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 MATN3O15232 486 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 PAPSS1O43252 624 aaPredicted RBP5.01□□□□□ -1.61
SCN3A-203ENST00000409101 AP5Z1O43299 807 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 MFSD11O43934 449 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 UBXN7O94888 489 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 MT-CO1P00395 513 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 IL12BP29460 328 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 VIPR1P32241 457 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 MAPK10P53779 464 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 AQP5P55064 265 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 CASP6P55212 293 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 JAG1P78504 1218 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 ST3GAL1Q11201 340 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 PON2Q15165 354 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 DEPDC1Q5TB30 811 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.01□□□□□ -1.61
SCN3A-203ENST00000409101 UNC5AQ6ZN44 842 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 NETO2Q8NC67 525 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 OR4A15Q8NGL6 344 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 MAPK15Q8TD08 544 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 STYXQ8WUJ0 223 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 FAM3CQ92520 227 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 RIT1Q92963 219 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 NACC2Q96BF6 587 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 P2RY11Q96G91 374 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 PPP3R2Q96LZ3 170 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 HAPLN3Q96S86 360 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 TRIM4Q9C037 500 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 ROGDIQ9GZN7 287 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 KCNF1Q9H3M0 494 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 XPNPEP1Q9NQW7 623 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 AP3M1Q9Y2T2 418 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 ULK1O75385 1050 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 ATP6V1B2P21281 511 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 NT5EP21589 574 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 PLK1P53350 603 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 HNRNPH2P55795 449 aaKnown RBP5.01□□□□□ -1.61
SCN3A-203ENST00000409101 CREB5Q02930 508 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 CSTF1Q05048 431 aaKnown RBP5.01□□□□□ -1.61
SCN3A-203ENST00000409101 TEX44Q53QW1 395 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 MIIPQ5JXC2 388 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 ANXA8L1Q5VT79 327 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 LRRC69Q6ZNQ3 347 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 CLEC20AQ6ZU45 233 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 GPRIN3Q6ZVF9 776 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 TMPRSS11BQ86T26 416 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 AMZ2Q86W34 360 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 ZCCHC10Q8TBK6 192 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 GFM2Q969S9 779 aaKnown RBP5.01□□□□□ -1.61
SCN3A-203ENST00000409101 ZIM3Q96PE6 472 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 S100A13Q99584 98 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 GBA3Q9H227 469 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 PIF1Q9H611 641 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 DNAJC11Q9NVH1 559 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 RGS17Q9UGC6 210 aaPredicted RBP5.01□□□□□ -1.61
SCN3A-203ENST00000409101 TMEM265A0A087WTH1 108 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 A6NCN8 305 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 TMEM191CA6NGB0 347 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 ZNF217O75362 1048 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 RPSAP08865 295 aaKnown RBP5.01□□□□□ -1.61
SCN3A-203ENST00000409101 NR2F1P10589 423 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 ALADP13716 330 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 HSD17B2P37059 387 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 MAGEA11P43364 429 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 RPL7AP62424 266 aaKnown RBP5.01□□□□□ -1.61
SCN3A-203ENST00000409101 TAF1AQ15573 450 aaPredicted RBP5.01□□□□□ -1.61
SCN3A-203ENST00000409101 CNGA3Q16281 694 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 LRRC73Q5JTD7 316 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 CDCA2Q69YH5 1023 aaPredicted RBP5.01□□□□□ -1.61
SCN3A-203ENST00000409101 BNC2Q6ZN30 1099 aaPredicted RBP5.01□□□□□ -1.61
SCN3A-203ENST00000409101 P4HA3Q7Z4N8 544 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 FAM46DQ8NEK8 389 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 ACTRT2Q8TDY3 377 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 STK32AQ8WU08 396 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 ERP27Q96DN0 273 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 LRRC46Q96FV0 321 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 EPN3Q9H201 632 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 SUV39H2Q9H5I1 410 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 GDF3Q9NR23 364 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 CHST7Q9NS84 486 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 NOP53Q9NZM5 478 aaKnown RBP5.01□□□□□ -1.61
SCN3A-203ENST00000409101 CACNG4Q9UBN1 327 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 ANAPC2Q9UJX6 822 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms