RNA–Protein interactions for RNA: ENST00000409057.5

PBRM1-205, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 4,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-205ENST00000409057 USP50Q70EL3 339 aaPredicted RBP10.7□□□□□ -0.7
PBRM1-205ENST00000409057 RBM4BQ9BQ04 359 aaKnown RBP10.7□□□□□ -0.7
PBRM1-205ENST00000409057 RBM4Q9BWF3 364 aaKnown RBP10.7□□□□□ -0.7
PBRM1-205ENST00000409057 SDCBP2Q9H190 292 aa10.7□□□□□ -0.7
PBRM1-205ENST00000409057 LYVE1Q9Y5Y7 322 aa10.7□□□□□ -0.7
PBRM1-205ENST00000409057 STON1Q9Y6Q2 735 aa10.7□□□□□ -0.7
PBRM1-205ENST00000409057 A8MX80 341 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 PRKAR1AP10644 381 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 RPL9P32969 192 aaKnown RBP10.69□□□□□ -0.7
PBRM1-205ENST00000409057 RCVRNP35243 200 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 ADRA1BP35368 520 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 ABL2P42684 1182 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 CPSF6Q16630 551 aaKnown RBP eCLIP10.69□□□□□ -0.7
PBRM1-205ENST00000409057 GALNT18Q6P9A2 607 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 ZYG11AQ6WRX3 759 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 SATL1Q86VE3 508 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 WDR48Q8TAF3 677 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 NKX2-3Q8TAU0 364 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 C10orf82Q8WW14 230 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 NXF3Q9H4D5 531 aaKnown RBP10.69□□□□□ -0.7
PBRM1-205ENST00000409057 NOCTQ9UK39 431 aaKnown RBP10.69□□□□□ -0.7
PBRM1-205ENST00000409057 SLC15A5A6NIM6 579 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 KPNA3O00505 521 aaPredicted RBP10.69□□□□□ -0.7
PBRM1-205ENST00000409057 CCNKO75909 580 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 THRBP10828 461 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 NTSP30990 170 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 PSMD4P55036 377 aaKnown RBP10.69□□□□□ -0.7
PBRM1-205ENST00000409057 WDR4P57081 412 aaKnown RBP10.69□□□□□ -0.7
PBRM1-205ENST00000409057 MAXP61244 160 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 HECTD3Q5T447 861 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 PARP8Q8N3A8 854 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 TOP6BLQ8N6T0 577 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 QKIQ96PU8 341 aaKnown RBP eCLIP10.69□□□□□ -0.7
PBRM1-205ENST00000409057 CIDEBQ9UHD4 219 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 ZNHIT2Q9UHR6 403 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 PCDHGC3Q9UN70 934 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 TDRKHQ9Y2W6 561 aaKnown RBP10.69□□□□□ -0.7
PBRM1-205ENST00000409057 ARIH1Q9Y4X5 557 aaPredicted RBP10.69□□□□□ -0.7
PBRM1-205ENST00000409057 CCDC162PA2VCL2 907 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 RGS10O43665 173 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 CILPO75339 1184 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 PCDH8O95206 1070 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 PIRTP0C851 137 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 CYP4B1P13584 511 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 MTHFRP42898 656 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 UGT2B15P54855 530 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 RAB15P59190 212 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 RALGPS1Q5JS13 557 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 TRIM40Q6P9F5 258 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 PNPT1Q8TCS8 783 aaKnown RBP10.69□□□□□ -0.7
PBRM1-205ENST00000409057 PTCD2Q8WV60 388 aaKnown RBP10.69□□□□□ -0.7
PBRM1-205ENST00000409057 KLRG1Q96E93 195 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 LINGO1Q96FE5 620 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 UROC1Q96N76 676 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 GATA5Q9BWX5 397 aaPredicted RBP10.69□□□□□ -0.7
PBRM1-205ENST00000409057 DMAC2Q9NW81 257 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 OGDHLQ9ULD0 1010 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 VPS4AQ9UN37 437 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 ZNF232Q9UNY5 417 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 STXBP5LQ9Y2K9 1186 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 SSNA1O43805 119 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 KLHL18O94889 574 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 RPS6KA3P51812 740 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 CRYBB1P53674 252 aaPredicted RBP10.69□□□□□ -0.7
PBRM1-205ENST00000409057 SPIBQ01892 262 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 CNPY1Q3B7I2 92 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 PABPC1LQ4VXU2 614 aaKnown RBP10.69□□□□□ -0.7
PBRM1-205ENST00000409057 BRMS1LQ5PSV4 323 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 MFSD4BQ5TF39 518 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 SLC26A9Q7LBE3 791 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 CYP4X1Q8N118 509 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 HM13Q8TCT9 377 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 LPPQ93052 612 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 NXNL1Q96CM4 212 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 PCDH12Q9NPG4 1184 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 PSME2Q9UL46 239 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 ST3GAL5Q9UNP4 418 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 U3KQV3 271 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 KIF1AQ12756 1690 aa10.69□□□□□ -0.7
PBRM1-205ENST00000409057 UBE2QL1A1L167 161 aa10.68□□□□□ -0.7
PBRM1-205ENST00000409057 CLDN25C9JDP6 229 aa10.68□□□□□ -0.7
PBRM1-205ENST00000409057 IDH3AP50213 366 aa10.68□□□□□ -0.7
PBRM1-205ENST00000409057 ACOX1Q15067 660 aa10.68□□□□□ -0.7
PBRM1-205ENST00000409057 LSM12Q3MHD2 195 aaKnown RBP10.68□□□□□ -0.7
PBRM1-205ENST00000409057 DDI2Q5TDH0 399 aa10.68□□□□□ -0.7
PBRM1-205ENST00000409057 PLET1Q6UQ28 207 aa10.68□□□□□ -0.7
PBRM1-205ENST00000409057 CAMKK1Q8N5S9 505 aa10.68□□□□□ -0.7
PBRM1-205ENST00000409057 OR52L1Q8NGH7 329 aa10.68□□□□□ -0.7
PBRM1-205ENST00000409057 FAR1Q8WVX9 515 aa10.68□□□□□ -0.7
PBRM1-205ENST00000409057 ELMO1Q92556 727 aa10.68□□□□□ -0.7
PBRM1-205ENST00000409057 HTRA1Q92743 480 aa10.68□□□□□ -0.7
PBRM1-205ENST00000409057 FCRL2Q96LA5 508 aaPredicted RBP10.68□□□□□ -0.7
PBRM1-205ENST00000409057 PPM1MQ96MI6 270 aa10.68□□□□□ -0.7
PBRM1-205ENST00000409057 GPR20Q99678 358 aa10.68□□□□□ -0.7
PBRM1-205ENST00000409057 CCDC3Q9BQI4 270 aa10.68□□□□□ -0.7
PBRM1-205ENST00000409057 EBF2Q9HAK2 575 aa10.68□□□□□ -0.7
PBRM1-205ENST00000409057 PRDM8Q9NQV8 689 aa10.68□□□□□ -0.7
PBRM1-205ENST00000409057 DKK3Q9UBP4 350 aa10.68□□□□□ -0.7
PBRM1-205ENST00000409057 POLR3HQ9Y535 204 aaPredicted RBP10.68□□□□□ -0.7
PBRM1-205ENST00000409057 PLK4O00444 970 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms