RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 CXCR3P49682 368 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 PYHIN1Q6K0P9 492 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 WDR59Q6PJI9 974 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 DCLRE1AQ6PJP8 1040 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 SPESP1Q6UW49 350 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 DBTP11182 482 aaKnown RBP12.04□□□□□ -0.48
SMCR8-201ENST00000406438 GOT1P17174 413 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 S100A1P23297 94 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 SHMT1P34896 483 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 CPSF6Q16630 551 aaKnown RBP eCLIP12.04□□□□□ -0.48
SMCR8-201ENST00000406438 HKDC1Q2TB90 917 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 IRGCQ6NXR0 463 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 CDYL2Q8N8U2 506 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 FAM129BQ96TA1 746 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 COPS7AQ9UBW8 275 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 WRBO00258 174 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 DDNO94850 711 aaPredicted RBP12.04□□□□□ -0.48
SMCR8-201ENST00000406438 FNBP1LQ5T0N5 605 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 SULT1C3Q6IMI6 304 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 TNS4Q8IZW8 715 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 CDCA5Q96FF9 252 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 IMP3Q9NV31 184 aaKnown RBP12.04□□□□□ -0.48
SMCR8-201ENST00000406438 RSL24D1Q9UHA3 163 aaKnown RBP12.04□□□□□ -0.48
SMCR8-201ENST00000406438 SYNPO2Q9UMS6 1093 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 RAP2CQ9Y3L5 183 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 RLN1P04808 185 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 CYP4B1P13584 511 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 CTPS1P17812 591 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 SCNN1GP51170 649 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 CCR3P51677 355 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 NRG3P56975 720 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 PPP2R2BQ00005 443 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.04□□□□□ -0.48
SMCR8-201ENST00000406438 ZNF697Q5TEC3 545 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 FAM92BQ6ZTR7 304 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 FBXW8Q8N3Y1 598 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 P2RX7Q99572 595 aaKnown RBP12.04□□□□□ -0.48
SMCR8-201ENST00000406438 CASKO14936 926 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 FCHO2Q0JRZ9 810 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 IL18Q14116 193 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 RNF43Q68DV7 783 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 RAVER1Q8IY67 606 aaKnown RBP12.04□□□□□ -0.48
SMCR8-201ENST00000406438 EIF1ADQ8N9N8 165 aaKnown RBP12.04□□□□□ -0.48
SMCR8-201ENST00000406438 HDAC10Q969S8 669 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 HTATIP2Q9BUP3 242 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 RNPEPL1Q9HAU8 725 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 IL17RBQ9NRM6 502 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 ADGRE2Q9UHX3 823 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 WBP11Q9Y2W2 641 aaKnown RBP12.04□□□□□ -0.48
SMCR8-201ENST00000406438 LIASO43766 372 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 SIN3BO75182 1162 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 MC4RP32245 332 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 ASMTP46597 345 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 SWI5Q1ZZU3 235 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 ZNF398Q8TD17 642 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 ACE2Q9BYF1 805 aaPredicted RBP12.03□□□□□ -0.48
SMCR8-201ENST00000406438 CLK4Q9HAZ1 481 aaKnown RBP12.03□□□□□ -0.48
SMCR8-201ENST00000406438 GNEQ9Y223 722 aaKnown RBP12.03□□□□□ -0.48
SMCR8-201ENST00000406438 DIP2CQ9Y2E4 1556 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 DDX3XO00571 662 aaKnown RBP eCLIP12.03□□□□□ -0.481e-10■■■■■ 33.7
SMCR8-201ENST00000406438 MASP1P48740 699 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 STXBP1P61764 594 aaKnown RBP12.03□□□□□ -0.48
SMCR8-201ENST00000406438 NDUFA9Q16795 377 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 ATP13A5Q4VNC0 1218 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 SNX20Q7Z614 316 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 C12orf50Q8NA57 414 aaPredicted RBP12.03□□□□□ -0.48
SMCR8-201ENST00000406438 CKAP2Q8WWK9 683 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 ACO2Q99798 780 aaKnown RBP12.03□□□□□ -0.48
SMCR8-201ENST00000406438 CCNB1IP1Q9NPC3 277 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 PNPLA3Q9NST1 481 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 ELOVL2Q9NXB9 296 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 BTRCQ9Y297 605 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 SLC27A5Q9Y2P5 690 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 LOXHD1Q8IVV2 1947 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 CYB5AP00167 134 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 KCNA5P22460 613 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 AP3S2P59780 193 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 ATXN7L2Q5T6C5 722 aaPredicted RBP12.03□□□□□ -0.48
SMCR8-201ENST00000406438 PGBD2Q6P3X8 592 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 GALNTL5Q7Z4T8 443 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 NAT16Q8N8M0 369 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 MBOAT7Q96N66 472 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 FCRL4Q96PJ5 515 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 ABI3Q9P2A4 366 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 GULP1Q9UBP9 304 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 KMOO15229 486 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 GRM6O15303 877 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 GMFGO60234 142 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 PGM3O95394 542 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 TNFRSF8P28908 595 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 MTHFRP42898 656 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 SSR2P43308 183 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 LSM3P62310 102 aaKnown RBP12.03□□□□□ -0.48
SMCR8-201ENST00000406438 VGLL4Q14135 290 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 BMT2Q1RMZ1 405 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 GALNT7Q86SF2 657 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 PGM2Q96G03 612 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 RNF157Q96PX1 679 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 FAM237BA0A1B0GVD1 139 aa12.03□□□□□ -0.48
SMCR8-201ENST00000406438 TAL1P17542 331 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms