RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 BRCA1P38398 1863 aaKnown RBP11.98□□□□□ -0.49
RBM39-206ENST00000403542 SUPT3HB4E1H0 165 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 HNRNPCP07910 306 aaKnown RBP eCLIP11.97□□□□□ -0.496e-7■□□□□ 9.6
RBM39-206ENST00000403542 HSPA8P11142 646 aaKnown RBP11.97□□□□□ -0.49
RBM39-206ENST00000403542 GPX3P22352 226 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 PCSK1P29120 753 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 AGTR2P50052 363 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 PPP1R8Q12972 351 aaKnown RBP11.97□□□□□ -0.49
RBM39-206ENST00000403542 AAK1Q2M2I8 961 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 UGT3A2Q3SY77 523 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 SIRPB2Q5JXA9 342 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 VPS50Q96JG6 964 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 CDK15Q96Q40 435 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 TUBB1Q9H4B7 451 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 NOL6Q9H6R4 1146 aaKnown RBP11.97□□□□□ -0.49
RBM39-206ENST00000403542 CATSPERBQ9H7T0 1116 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 SP110Q9HB58 689 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 LTB4R2Q9NPC1 389 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 PNPLA3Q9NST1 481 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 DNAAF2Q9NVR5 837 aaKnown RBP11.97□□□□□ -0.49
RBM39-206ENST00000403542 ZNF711Q9Y462 761 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 MAGED1Q9Y5V3 778 aaPredicted RBP11.97□□□□□ -0.49
RBM39-206ENST00000403542 MYADML2A6NDP7 307 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 S1PR4O95977 384 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 RBP1P09455 135 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 IMPDH1P20839 514 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 NR4A1P22736 598 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 AXLP30530 894 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 GRK4P32298 578 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 PSMD7P51665 324 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 HK2P52789 917 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 EMP3P54852 163 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 ARPP19P56211 112 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 DNAJB13P59910 316 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 TXNL4AP83876 142 aaKnown RBP11.97□□□□□ -0.49
RBM39-206ENST00000403542 EFEMP1Q12805 493 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 ACAP2Q15057 778 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 PIK3R6Q5UE93 754 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 MARC1Q5VT66 337 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 IQSEC1Q6DN90 963 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 ZNF549Q6P9A3 640 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 XKR5Q6UX68 686 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 GPR141Q7Z602 305 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 ANKRD23Q86SG2 305 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 RALGPS2Q86X27 583 aaPredicted RBP11.97□□□□□ -0.49
RBM39-206ENST00000403542 UBXN10Q96LJ8 280 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 TCF12Q99081 682 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 ADI1Q9BV57 179 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 GIPC1O14908 333 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 POLD3Q15054 466 aaPredicted RBP11.97□□□□□ -0.49
RBM39-206ENST00000403542 CXCL17Q6UXB2 119 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 PLEKHH3Q7Z736 793 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 SCD5Q86SK9 330 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 PCYOX1LQ8NBM8 494 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 TSGA13Q96PP4 275 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 SARS2Q9NP81 518 aaKnown RBP11.97□□□□□ -0.49
RBM39-206ENST00000403542 PLK2Q9NYY3 685 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 NDUFAF1Q9Y375 327 aa11.97□□□□□ -0.49
RBM39-206ENST00000403542 DLGAP1O14490 977 aa11.96□□□□□ -0.49
RBM39-206ENST00000403542 PSMD3O43242 534 aa11.96□□□□□ -0.49
RBM39-206ENST00000403542 SNAP29O95721 258 aa11.96□□□□□ -0.49
RBM39-206ENST00000403542 GOT2P00505 430 aaKnown RBP11.96□□□□□ -0.49
RBM39-206ENST00000403542 EEF1B2P24534 225 aaKnown RBP11.96□□□□□ -0.49
RBM39-206ENST00000403542 FMO4P31512 558 aa11.96□□□□□ -0.49
RBM39-206ENST00000403542 KCTD21Q4G0X4 260 aa11.96□□□□□ -0.49
RBM39-206ENST00000403542 TIGD2Q4W5G0 525 aa11.96□□□□□ -0.49
RBM39-206ENST00000403542 SLC39A12Q504Y0 691 aa11.96□□□□□ -0.49
RBM39-206ENST00000403542 RAP1GAP2Q684P5 730 aa11.96□□□□□ -0.49
RBM39-206ENST00000403542 OVOS1Q6IE37 1185 aa11.96□□□□□ -0.49
RBM39-206ENST00000403542 KDELC1Q6UW63 502 aa11.96□□□□□ -0.49
RBM39-206ENST00000403542 TMEM126BQ8IUX1 230 aa11.96□□□□□ -0.49
RBM39-206ENST00000403542 CFAP52Q8N1V2 620 aa11.96□□□□□ -0.49
RBM39-206ENST00000403542 TFAP2CQ92754 450 aa11.96□□□□□ -0.49
RBM39-206ENST00000403542 C12orf43Q96C57 262 aaKnown RBP11.96□□□□□ -0.49
RBM39-206ENST00000403542 THEGQ9P2T0 379 aa11.96□□□□□ -0.49
RBM39-206ENST00000403542 IKZF3Q9UKT9 509 aa11.96□□□□□ -0.49
RBM39-206ENST00000403542 TSC2P49815 1807 aa11.96□□□□□ -0.49
RBM39-206ENST00000403542 A0A1W2PPW3 197 aa11.96□□□□□ -0.5
RBM39-206ENST00000403542 AP3B1O00203 1094 aa11.96□□□□□ -0.5
RBM39-206ENST00000403542 AZIN1O14977 448 aa11.96□□□□□ -0.5
RBM39-206ENST00000403542 ARPC2O15144 300 aa11.96□□□□□ -0.5
RBM39-206ENST00000403542 CLOCKO15516 846 aa11.96□□□□□ -0.5
RBM39-206ENST00000403542 GPR39O43194 453 aa11.96□□□□□ -0.5
RBM39-206ENST00000403542 CACNG3O60359 315 aa11.96□□□□□ -0.5
RBM39-206ENST00000403542 CD247P20963 164 aa11.96□□□□□ -0.5
RBM39-206ENST00000403542 PSMA4P25789 261 aaKnown RBP11.96□□□□□ -0.5
RBM39-206ENST00000403542 EEF1DP29692 281 aaKnown RBP11.96□□□□□ -0.5
RBM39-206ENST00000403542 ACVRL1P37023 503 aa11.96□□□□□ -0.5
RBM39-206ENST00000403542 LEPRP48357 1165 aaKnown RBP11.96□□□□□ -0.5
RBM39-206ENST00000403542 CDKN1CP49918 316 aaPredicted RBP11.96□□□□□ -0.5
RBM39-206ENST00000403542 CLCN5P51795 746 aa11.96□□□□□ -0.5
RBM39-206ENST00000403542 PMS2P3Q13401 168 aa11.96□□□□□ -0.5
RBM39-206ENST00000403542 NFYCQ13952 458 aa11.96□□□□□ -0.5
RBM39-206ENST00000403542 UPP1Q16831 310 aa11.96□□□□□ -0.5
RBM39-206ENST00000403542 PAGE3Q5JUK9 113 aa11.96□□□□□ -0.5
RBM39-206ENST00000403542 SMYD5Q6GMV2 418 aa11.96□□□□□ -0.5
RBM39-206ENST00000403542 TMEM214Q6NUQ4 689 aaKnown RBP11.96□□□□□ -0.5
RBM39-206ENST00000403542 TMEM26Q6ZUK4 368 aa11.96□□□□□ -0.5
RBM39-206ENST00000403542 ERMP1Q7Z2K6 904 aa11.96□□□□□ -0.5
RBM39-206ENST00000403542 MIER2Q8N344 545 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms