RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 VARS2Q5ST30 1063 aaKnown RBP12.07□□□□□ -0.48
CACNA1C-213ENST00000399629 GALNT18Q6P9A2 607 aa12.07□□□□□ -0.48
CACNA1C-213ENST00000399629 CADM2Q8N3J6 435 aa12.07□□□□□ -0.48
CACNA1C-213ENST00000399629 RTL3Q8N8U3 475 aaKnown RBP12.07□□□□□ -0.48
CACNA1C-213ENST00000399629 LMX1AQ8TE12 382 aa12.07□□□□□ -0.48
CACNA1C-213ENST00000399629 FRMD6Q96NE9 622 aa12.07□□□□□ -0.48
CACNA1C-213ENST00000399629 TMEM79Q9BSE2 394 aa12.07□□□□□ -0.48
CACNA1C-213ENST00000399629 TLR9Q9NR96 1032 aa12.07□□□□□ -0.48
CACNA1C-213ENST00000399629 TPRKBQ9Y3C4 175 aa12.07□□□□□ -0.48
CACNA1C-213ENST00000399629 E9PAM4 449 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 INPPL1O15357 1258 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 CLEC3AO75596 197 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 ASLP04424 464 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 ITGAVP06756 1048 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 ADRB2P07550 413 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 CCND1P24385 295 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 PTGES3Q15185 160 aaKnown RBP12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 HECTD2Q5U5R9 776 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 GKN2Q86XP6 184 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 KATNAL2Q8IYT4 538 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 VPS35Q96QK1 796 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 PRDM8Q9NQV8 689 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 RASSF1Q9NS23 344 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 NPEPPSL1A6NEC2 478 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 NEMP2A6NFY4 417 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 PEX11AO75192 247 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 ADH5P11766 374 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 DDX6P26196 483 aaKnown RBP eCLIP12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 NRG3P56975 720 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 RHBDL3P58872 404 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 KCNMA1Q12791 1236 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 RTL4Q6ZR62 310 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 TMEM161BQ8NDZ6 487 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 SLC9A6Q92581 669 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 ITCHQ96J02 903 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 SIKE1Q9BRV8 207 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 TMEM27Q9HBJ8 222 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 GSTK1Q9Y2Q3 226 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 A0A0G2JLL6 359 aaPredicted RBP12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 B3GALT2O43825 422 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 KHDRBS3O75525 346 aaKnown RBP12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 KLK3P07288 261 aaPredicted RBP12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 CPSF6Q16630 551 aaKnown RBP eCLIP12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 LPCAT2Q7L5N7 544 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 PRRT2Q7Z6L0 340 aaPredicted RBP12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 MTDHQ86UE4 582 aaKnown RBP12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 DBF4BQ8NFT6 615 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 IL31RAQ8NI17 732 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 RBM18Q96H35 190 aaKnown RBP12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 SH3GL2Q99962 352 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 CAB39LQ9H9S4 337 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 GTF2IRD1Q9UHL9 959 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 BTRCQ9Y297 605 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 MFHAS1Q9Y4C4 1052 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 RARAP10276 462 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 TFEBP19484 476 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 SSTR1P30872 391 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 PRKG2Q13237 762 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 KRT74Q7RTS7 529 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 STK32CQ86UX6 486 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 ADHFE1Q8IWW8 467 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 KLHL4Q9C0H6 718 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 OR1F1O43749 312 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 RECQL5O94762 991 aaPredicted RBP12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 PFKMP08237 780 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 CCDC54Q8NEL0 328 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 HDAC10Q969S8 669 aa12.06□□□□□ -0.48
CACNA1C-213ENST00000399629 NOL4O94818 638 aa12.05□□□□□ -0.48
CACNA1C-213ENST00000399629 CCND3P30281 292 aaPredicted RBP12.05□□□□□ -0.48
CACNA1C-213ENST00000399629 LRPAP1P30533 357 aa12.05□□□□□ -0.48
CACNA1C-213ENST00000399629 RPL22P35268 128 aaKnown RBP12.05□□□□□ -0.48
CACNA1C-213ENST00000399629 EPS8Q12929 822 aa12.05□□□□□ -0.48
CACNA1C-213ENST00000399629 NFATC2Q13469 925 aa12.05□□□□□ -0.48
CACNA1C-213ENST00000399629 MAMLD1Q13495 774 aa12.05□□□□□ -0.48
CACNA1C-213ENST00000399629 PDGFRLQ15198 375 aa12.05□□□□□ -0.48
CACNA1C-213ENST00000399629 UGCGQ16739 394 aa12.05□□□□□ -0.48
CACNA1C-213ENST00000399629 OLFML2BQ68BL8 750 aa12.05□□□□□ -0.48
CACNA1C-213ENST00000399629 GCNT7Q6ZNI0 430 aa12.05□□□□□ -0.48
CACNA1C-213ENST00000399629 BEND5Q7L4P6 421 aa12.05□□□□□ -0.48
CACNA1C-213ENST00000399629 PHF10Q8WUB8 498 aaKnown RBP12.05□□□□□ -0.48
CACNA1C-213ENST00000399629 KLHL32Q96NJ5 620 aa12.05□□□□□ -0.48
CACNA1C-213ENST00000399629 LHX5Q9H2C1 402 aa12.05□□□□□ -0.48
CACNA1C-213ENST00000399629 CLEC4MQ9H2X3 399 aaPredicted RBP12.05□□□□□ -0.48
CACNA1C-213ENST00000399629 PIGUQ9H490 435 aa12.05□□□□□ -0.48
CACNA1C-213ENST00000399629 AGO3Q9H9G7 860 aaKnown RBP12.05□□□□□ -0.48
CACNA1C-213ENST00000399629 IQGAP1P46940 1657 aa12.05□□□□□ -0.48
CACNA1C-213ENST00000399629 A6NCN8 305 aa12.05□□□□□ -0.48
CACNA1C-213ENST00000399629 TLX3O43711 291 aaPredicted RBP12.05□□□□□ -0.48
CACNA1C-213ENST00000399629 FOSL2P15408 326 aa12.05□□□□□ -0.48
CACNA1C-213ENST00000399629 CBFBQ13951 182 aa12.05□□□□□ -0.48
CACNA1C-213ENST00000399629 KIAA0408Q6ZU52 694 aa12.05□□□□□ -0.48
CACNA1C-213ENST00000399629 SLC43A3Q8NBI5 491 aa12.05□□□□□ -0.48
CACNA1C-213ENST00000399629 GRIP2Q9C0E4 1043 aa12.05□□□□□ -0.48
CACNA1C-213ENST00000399629 CHMP1AQ9HD42 196 aaPredicted RBP12.05□□□□□ -0.48
CACNA1C-213ENST00000399629 SRRDQ9UH36 339 aa12.05□□□□□ -0.48
CACNA1C-213ENST00000399629 FCF1Q9Y324 198 aaKnown RBP12.05□□□□□ -0.48
CACNA1C-213ENST00000399629 PCDHB1Q9Y5F3 818 aa12.05□□□□□ -0.48
CACNA1C-213ENST00000399629 ACTL7BQ9Y614 415 aa12.05□□□□□ -0.48
CACNA1C-213ENST00000399629 SMIM28A0A1B0GU29 152 aa12.05□□□□□ -0.48
CACNA1C-213ENST00000399629 A0A1W2PRU2 124 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms