RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 NUDT21O43809 227 aaKnown RBP6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 MMP20O60882 483 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 AKR7A3O95154 331 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 ADH1AP07327 375 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 MMP2P08253 660 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 ENO2P09104 434 aaPredicted RBP6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 ZSCAN5DPP0CG00 497 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 PTGS2P35354 604 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 AFF1P51825 1210 aaKnown RBP6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 CUL1Q13616 776 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 COTL1Q14019 142 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 EXOSC6Q5RKV6 272 aaKnown RBP6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 TREML2Q5T2D2 321 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 ZBTB37Q5TC79 503 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 MAP1SQ66K74 1059 aaPredicted RBP6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 TIGD7Q6NT04 549 aaPredicted RBP6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 VASH2Q86V25 355 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 ZDHHC17Q8IUH5 632 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 LPCAT1Q8NF37 534 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 OR6Y1Q8NGX8 325 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 CDC26Q8NHZ8 85 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 SETD6Q8TBK2 473 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 ASAP3Q8TDY4 903 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 ATP8B4Q8TF62 1192 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 TSPEARQ8WU66 669 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 ZNF516Q92618 1163 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 COPS5Q92905 334 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 OTUD5Q96G74 571 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 CCDC140Q96MF4 163 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 IL21Q9HBE4 155 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 SPACA1Q9HBV2 294 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 XPNPEP1Q9NQW7 623 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 DMAC2Q9NW81 257 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 SPASTQ9UBP0 616 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 KCNK7Q9Y2U2 307 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 PCDHB1Q9Y5F3 818 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 GMFGO60234 142 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 ZNF821O75541 412 aaPredicted RBP6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 GCATO75600 419 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 VNN2O95498 520 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 LMNAP02545 664 aaKnown RBP6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 MYZAPP0CAP1 466 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 RARAP10276 462 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 ETS1P14921 441 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 CYP11B1P15538 503 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 RAP1GAPP47736 663 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 ARPC4P59998 168 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 PRAMEP78395 509 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 PTSQ03393 145 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 SLC29A2Q14542 456 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 ARHGAP19Q14CB8 494 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 MED22Q15528 200 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 RAB41Q5JT25 222 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 GPR153Q6NV75 609 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 MFSD7Q6UXD7 560 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 USP50Q70EL3 339 aaPredicted RBP6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 CCDC117Q8IWD4 279 aaPredicted RBP6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 ELMOD2Q8IZ81 293 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 SLC26A7Q8TE54 656 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 HES6Q96HZ4 224 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 FMO2Q99518 471 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 PRPF18Q99633 342 aaKnown RBP6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 LBHD1Q9BQE6 289 aaPredicted RBP6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 HAPLN2Q9GZV7 340 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 RASSF4Q9H2L5 321 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 VIPAS39Q9H9C1 493 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 CENPMQ9NSP4 180 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 PLA2G3Q9NZ20 509 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 AFF4Q9UHB7 1163 aaKnown RBP6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 ASIC3Q9UHC3 531 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 INTS6Q9UL03 887 aaKnown RBP6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 KIAA1257Q9ULG3 409 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 CHKBQ9Y259 395 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 UTP11Q9Y3A2 253 aaKnown RBP6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 NFS1Q9Y697 457 aa6.25□□□□□ -1.41
TRAPPC13-202ENST00000399438 TTC34A8MYJ7 566 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 EIF3DO15371 548 aaKnown RBP eCLIP6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 ACSL4O60488 711 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 KLHL2O95198 593 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 KCNK5O95279 499 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 ANXA2P07355 339 aaKnown RBP6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 EPHX2P34913 555 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 PRKCIP41743 596 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 PTGIRP43119 386 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 LIG4P49917 911 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 OLR1P78380 273 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 LY6KQ17RY6 165 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 INSCQ1MX18 579 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 SMTNL2Q2TAL5 461 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 Q3ZCU0 254 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 KRT80Q6KB66 452 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 CCDC137Q6PK04 289 aaKnown RBP6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 TMC3Q7Z5M5 1100 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 NETO2Q8NC67 525 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 CFHR4Q92496 578 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 SLC47A1Q96FL8 570 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 C9orf72Q96LT7 481 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 FCRL4Q96PJ5 515 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 MIPEPQ99797 713 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms