RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 HSH2DQ96JZ2 352 aa11.82□□□□□ -0.52
SMIM11A-201ENST00000399292 NSMCE3Q96MG7 304 aa11.82□□□□□ -0.52
SMIM11A-201ENST00000399292 MGME1Q9BQP7 344 aa11.82□□□□□ -0.52
SMIM11A-201ENST00000399292 ANP32EQ9BTT0 268 aa11.82□□□□□ -0.52
SMIM11A-201ENST00000399292 MAK16Q9BXY0 300 aaKnown RBP11.82□□□□□ -0.52
SMIM11A-201ENST00000399292 CAAP1Q9H8G2 361 aa11.82□□□□□ -0.52
SMIM11A-201ENST00000399292 NT5MQ9NPB1 228 aa11.82□□□□□ -0.52
SMIM11A-201ENST00000399292 BRD7Q9NPI1 651 aa11.82□□□□□ -0.52
SMIM11A-201ENST00000399292 HAUS2Q9NVX0 235 aa11.82□□□□□ -0.52
SMIM11A-201ENST00000399292 NLGN3Q9NZ94 848 aa11.82□□□□□ -0.52
SMIM11A-201ENST00000399292 CSNK1G3Q9Y6M4 447 aa11.82□□□□□ -0.52
SMIM11A-201ENST00000399292 TMEM131Q92545 1883 aa11.82□□□□□ -0.52
SMIM11A-201ENST00000399292 A8MX80 341 aa11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 K7ESM1 405 aa11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 AQP9O43315 295 aa11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 MFSD11O43934 449 aa11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 RECQL5O94762 991 aaPredicted RBP11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 MAP3K6O95382 1288 aa11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 ELFN1P0C7U0 828 aa11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 GIMD1P0DJR0 217 aa11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 JUPP14923 745 aa11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 CES1P23141 567 aa11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 HTR1BP28222 390 aa11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 SLC1A1P43005 524 aa11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 MAGEA1P43355 309 aa11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 GATA4P43694 442 aa11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 DUSP3P51452 185 aaPredicted RBP11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 DAB2P98082 770 aa11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 EIF2B5Q13144 721 aaKnown RBP11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 INPP5AQ14642 412 aa11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 TCEAL1Q15170 157 aa11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 ODF2Q5BJF6 829 aa11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 FAXCQ5TGI0 409 aa11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 LIPIQ6XZB0 460 aa11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 MACC1Q6ZN28 852 aa11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 DPPA4Q7L190 304 aa11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 TC2NQ8N9U0 490 aa11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 ZNF548Q8NEK5 533 aaPredicted RBP11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 LMX1AQ8TE12 382 aa11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 RFFLQ8WZ73 363 aa11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 RAPGEF5Q92565 580 aa11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 MAML1Q92585 1016 aa11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 TSGA13Q96PP4 275 aa11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 RNF157Q96PX1 679 aa11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 SLC13A1Q9BZW2 595 aa11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 RBM22Q9NW64 420 aaKnown RBP eCLIP11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 SPASTQ9UBP0 616 aa11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 ZMIZ1Q9ULJ6 1067 aa11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 PHTF1Q9UMS5 762 aa11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 FAM208BQ5VWN6 2430 aa11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 DSPP15924 2871 aaKnown RBP11.81□□□□□ -0.52
SMIM11A-201ENST00000399292 ATRXP46100 2492 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 ZFYVE26Q68DK2 2539 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 LRRD1A4D1F6 860 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 FAM149AA5PLN7 773 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 M0R082 166 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 NEBLO76041 1014 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 CKMT1AP12532 417 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 NOP2P46087 812 aaKnown RBP11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 BLKP51451 505 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 E2F1Q01094 437 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 PPARDQ03181 441 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 GBE1Q04446 702 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 RALGDSQ12967 914 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 ACOX1Q15067 660 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 PRRT3Q5FWE3 981 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 ARMC12Q5T9G4 340 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 LRRC38Q5VT99 294 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 MARCH9Q86YJ5 346 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 RHOT1Q8IXI2 618 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 NDUFAF2Q8N183 169 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 PQLC3Q8N755 202 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 FAM181AQ8N9Y4 354 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 CCNYQ8ND76 341 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 ATL2Q8NHH9 583 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 ZNF417Q8TAU3 575 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 FATE1Q969F0 183 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 APOLD1Q96LR9 279 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 ZNF830Q96NB3 372 aaPredicted RBP11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 ZNF587Q96SQ5 575 aaPredicted RBP11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 IL12RB2Q99665 862 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 SEMA3CQ99985 751 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 APOOQ9BUR5 198 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 POLR1EQ9GZS1 481 aaKnown RBP11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 RBSNQ9H1K0 784 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 USP29Q9HBJ7 922 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 B4GALT6Q9UBX8 382 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 APOBEC3BQ9UH17 382 aaKnown RBP11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 AMACRQ9UHK6 382 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 OR1A2Q9Y585 309 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 RAI2Q9Y5P3 530 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 LAMA5O15230 3695 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 TRPM6Q9BX84 2022 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 DOCK9Q9BZ29 2069 aa11.8□□□□□ -0.52
SMIM11A-201ENST00000399292 TRABD2BA6NFA1 517 aa11.79□□□□□ -0.52
SMIM11A-201ENST00000399292 ZNF487B1APH4 448 aa11.79□□□□□ -0.52
SMIM11A-201ENST00000399292 TPP1O14773 563 aa11.79□□□□□ -0.52
SMIM11A-201ENST00000399292 PGLSO95336 258 aa11.79□□□□□ -0.52
SMIM11A-201ENST00000399292 CPP00450 1065 aa11.79□□□□□ -0.52
SMIM11A-201ENST00000399292 PCCBP05166 539 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms