RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 RAD51Q06609 339 aa17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 MPP7Q5T2T1 576 aa17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 TMEM207Q6UWW9 146 aa17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 APLFQ8IW19 511 aaPredicted RBP17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 FAM217AQ8IXS0 508 aa17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 LPGAT1Q92604 370 aa17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 SGF29Q96ES7 293 aa17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 CLPTM1LQ96KA5 538 aa17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 RNF38Q9H0F5 515 aa17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 GSTO2Q9H4Y5 243 aa17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 ALG9Q9H6U8 611 aa17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 POMPQ9Y244 141 aa17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 GFRA2O00451 464 aa17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 NEMP1O14524 444 aa17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 VPS4BO75351 444 aa17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 ZMPSTE24O75844 475 aa17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 UPP2O95045 317 aa17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 CSNK1DP48730 415 aa17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 CLNS1AP54105 237 aaKnown RBP17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 TLE2Q04725 743 aa17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 ART3Q13508 389 aa17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 PDCD2Q16342 344 aaPredicted RBP17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 SPOUT1Q5T280 376 aaKnown RBP17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 UGT3A1Q6NUS8 523 aa17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 NCEH1Q6PIU2 408 aa17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 DEFB128Q7Z7B8 93 aa17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 SNX32Q86XE0 403 aa17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 TMEM126BQ8IUX1 230 aa17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 OR4K2Q8NGD2 314 aa17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 OR52K2Q8NGK3 314 aa17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 TMA16Q96EY4 203 aaKnown RBP17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 SUDS3Q9H7L9 328 aaPredicted RBP17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 GKN1Q9NS71 199 aa17.69■□□□□ 0.42
HLA-DQB1-204ENST00000399084 OR51F1A6NGY5 319 aa17.68■□□□□ 0.42
HLA-DQB1-204ENST00000399084 MEI4A8MW99 385 aa17.68■□□□□ 0.42
HLA-DQB1-204ENST00000399084 H0Y626 953 aa17.68■□□□□ 0.42
HLA-DQB1-204ENST00000399084 KERAO60938 352 aa17.68■□□□□ 0.42
HLA-DQB1-204ENST00000399084 GPC4O75487 556 aa17.68■□□□□ 0.42
HLA-DQB1-204ENST00000399084 SUPT7LO94864 414 aa17.68■□□□□ 0.42
HLA-DQB1-204ENST00000399084 MBL2P11226 248 aaPredicted RBP17.68■□□□□ 0.42
HLA-DQB1-204ENST00000399084 VEGFBP49765 207 aa17.68■□□□□ 0.42
HLA-DQB1-204ENST00000399084 PGGT1BP53609 377 aa17.68■□□□□ 0.42
HLA-DQB1-204ENST00000399084 RETSATQ6NUM9 610 aa17.68■□□□□ 0.42
HLA-DQB1-204ENST00000399084 ZFP1Q6P2D0 407 aa17.68■□□□□ 0.42
HLA-DQB1-204ENST00000399084 TXNDC11Q6PKC3 985 aa17.68■□□□□ 0.42
HLA-DQB1-204ENST00000399084 CERS6Q6ZMG9 384 aa17.68■□□□□ 0.42
HLA-DQB1-204ENST00000399084 BNC2Q6ZN30 1099 aaPredicted RBP17.68■□□□□ 0.42
HLA-DQB1-204ENST00000399084 EFL1Q7Z2Z2 1120 aaKnown RBP17.68■□□□□ 0.42
HLA-DQB1-204ENST00000399084 DSELQ8IZU8 1212 aa17.68■□□□□ 0.42
HLA-DQB1-204ENST00000399084 DCAF4L2Q8NA75 395 aa17.68■□□□□ 0.42
HLA-DQB1-204ENST00000399084 ACDQ96AP0 544 aa17.68■□□□□ 0.42
HLA-DQB1-204ENST00000399084 FEM1AQ9BSK4 669 aa17.68■□□□□ 0.42
HLA-DQB1-204ENST00000399084 C1QTNF3Q9BXJ4 246 aa17.68■□□□□ 0.42
HLA-DQB1-204ENST00000399084 MRPL1Q9BYD6 325 aaKnown RBP17.68■□□□□ 0.42
HLA-DQB1-204ENST00000399084 RNF208Q9H0X6 261 aa17.68■□□□□ 0.42
HLA-DQB1-204ENST00000399084 MAGEE1Q9HCI5 957 aa17.68■□□□□ 0.42
HLA-DQB1-204ENST00000399084 TBX21Q9UL17 535 aa17.68■□□□□ 0.42
HLA-DQB1-204ENST00000399084 COPG1Q9Y678 874 aaKnown RBP17.68■□□□□ 0.42
HLA-DQB1-204ENST00000399084 OAS3Q9Y6K5 1087 aaKnown RBP17.68■□□□□ 0.42
HLA-DQB1-204ENST00000399084 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 NEMP2A6NFY4 417 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 STX16-NPEPL1H3BU86 382 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 STX16O14662 325 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 UBDO15205 165 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 STX7O15400 261 aaKnown RBP17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 VPS26AO75436 327 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 SRP72O76094 671 aaKnown RBP17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 RHOBTB1O94844 696 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 HNRNPLP14866 589 aaKnown RBP eCLIP17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 KCNA5P22460 613 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 CDC25CP30307 473 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 PTGER3P43115 390 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 CCR10P46092 362 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 PSMD8P48556 350 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 NUDT2P50583 147 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 EPHB1P54762 984 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 MRPS35P82673 323 aaKnown RBP17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 SMAD3P84022 425 aaKnown RBP17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 TIAL1Q01085 375 aaKnown RBP eCLIP17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 LDB1Q86U70 411 aaPredicted RBP17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 CHCHD4Q8N4Q1 142 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 DTX3LQ8TDB6 740 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 ATOH8Q96SQ7 321 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 CYP2S1Q96SQ9 504 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 ZNF184Q99676 751 aaPredicted RBP17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 CCT7Q99832 543 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 CYP4F12Q9HCS2 524 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 MRPL17Q9NRX2 175 aaKnown RBP17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 DNMT3BQ9UBC3 853 aaKnown RBP17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 LSM7Q9UK45 103 aaKnown RBP17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 SPO11Q9Y5K1 396 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 INSL5Q9Y5Q6 135 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 SCN5AQ14524 2016 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 AIM2O14862 343 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 TMCC1O94876 653 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 ESR1P03372 595 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 CCL5P13501 91 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 RGRP47804 291 aa17.67■□□□□ 0.42
HLA-DQB1-204ENST00000399084 ARF5P84085 180 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms