RNA–Protein interactions for RNA: ENST00000398455.3

HIGD1C-201, Transcript of HIG1 hypoxia inducible domain family member 1C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIGD1C, Length 371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1C-201ENST00000398455 CTCFLQ8NI51 663 aaPredicted RBP4.04□□□□□ -1.76
HIGD1C-201ENST00000398455 NSMCE1Q8WV22 266 aa4.04□□□□□ -1.76
HIGD1C-201ENST00000398455 ELMOD3Q96FG2 381 aa4.04□□□□□ -1.76
HIGD1C-201ENST00000398455 GAD1Q99259 594 aa4.04□□□□□ -1.76
HIGD1C-201ENST00000398455 THAP7Q9BT49 309 aaPredicted RBP4.04□□□□□ -1.76
HIGD1C-201ENST00000398455 CADM1Q9BY67 442 aaKnown RBP4.04□□□□□ -1.76
HIGD1C-201ENST00000398455 GPR88Q9GZN0 384 aa4.04□□□□□ -1.76
HIGD1C-201ENST00000398455 C1orf21Q9H246 121 aa4.04□□□□□ -1.76
HIGD1C-201ENST00000398455 PLEKHA4Q9H4M7 779 aa4.04□□□□□ -1.76
HIGD1C-201ENST00000398455 RANGRFQ9HD47 186 aaPredicted RBP4.04□□□□□ -1.76
HIGD1C-201ENST00000398455 ENTPD7Q9NQZ7 604 aa4.04□□□□□ -1.76
HIGD1C-201ENST00000398455 ABCB8Q9NUT2 735 aa4.04□□□□□ -1.76
HIGD1C-201ENST00000398455 TMEM248Q9NWD8 314 aa4.04□□□□□ -1.76
HIGD1C-201ENST00000398455 CHCHD3Q9NX63 227 aaKnown RBP4.04□□□□□ -1.76
HIGD1C-201ENST00000398455 UPB1Q9UBR1 384 aa4.04□□□□□ -1.76
HIGD1C-201ENST00000398455 ADAM21Q9UKJ8 722 aa4.04□□□□□ -1.76
HIGD1C-201ENST00000398455 CDH7Q9ULB5 785 aa4.04□□□□□ -1.76
HIGD1C-201ENST00000398455 PLAGL1Q9UM63 463 aa4.04□□□□□ -1.76
HIGD1C-201ENST00000398455 B3GNT3Q9Y2A9 372 aa4.04□□□□□ -1.76
HIGD1C-201ENST00000398455 CMAHPQ9Y471 501 aa4.04□□□□□ -1.76
HIGD1C-201ENST00000398455 LIPGQ9Y5X9 500 aa4.04□□□□□ -1.76
HIGD1C-201ENST00000398455 A0A087WV48 116 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 FAM237AA0A1B0GTK4 181 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 A0A1W2PR77 199 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 KRT87PA6NCN2 255 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 TMEM247A6NEH6 219 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 MCIDASD6RGH6 385 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 TXNL1O43396 289 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 PRAMEF2O60811 474 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 DIAPH2O60879 1101 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 USP12O75317 370 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 STAM2O75886 525 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 ADAP00813 363 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 ALDOCP09972 364 aaKnown RBP4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 ACTN1P12814 892 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 WT1P19544 449 aaPredicted RBP4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 AGAP20933 346 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 GPD1P21695 349 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 SFPQP23246 707 aaKnown RBP eCLIP4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 PTPN3P26045 913 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 TYK2P29597 1187 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 DIO1P49895 249 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 LIMK1P53667 647 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 SOX10P56693 466 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 UBASH3AP57075 661 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 SHC2P98077 582 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 TFAP4Q01664 338 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 ACSM2AQ08AH3 577 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 LMAN2Q12907 356 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 CXorf66Q5JRM2 361 aaPredicted RBP4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 ACSM2BQ68CK6 577 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 DENND2CQ68D51 928 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 CEP85Q6P2H3 762 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 KIRREL2Q6UWL6 708 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 RNF144BQ7Z419 303 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 SPATA19Q7Z5L4 167 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 DSG4Q86SJ6 1040 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 GPAT4Q86UL3 456 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 HACE1Q8IYU2 909 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 RNF168Q8IYW5 571 aaPredicted RBP4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 SYCP3Q8IZU3 236 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 EXD3Q8N9H8 876 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 SCAIQ8N9R8 606 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 TERB1Q8NA31 727 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 DNAAF1Q8NEP3 725 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 TMEM170AQ8WVE7 144 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 LINC00615Q96LM1 132 aaPredicted RBP4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 CEP295NLQ96MC4 621 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 RUNDC3BQ96NL0 473 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 BBC3Q96PG8 261 aaPredicted RBP4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 FYTTD1Q96QD9 318 aaKnown RBP4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 SNX18Q96RF0 628 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 IWS1Q96ST2 819 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 FERMT1Q9BQL6 677 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 CIPCQ9C0C6 399 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 KIF9Q9HAQ2 790 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 USP29Q9HBJ7 922 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 SEMA4GQ9NTN9 838 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 TFCP2L1Q9NZI6 479 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 AKAP7Q9P0M2 348 aaPredicted RBP4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 FBXO40Q9UH90 709 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 HOOK1Q9UJC3 728 aaKnown RBP4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 SH3BGRL2Q9UJC5 107 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 DTX4Q9Y2E6 619 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 WBP11Q9Y2W2 641 aaKnown RBP4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 NFS1Q9Y697 457 aa4.03□□□□□ -1.76
HIGD1C-201ENST00000398455 A0A1W2PRV1 198 aa4.02□□□□□ -1.77
HIGD1C-201ENST00000398455 HTR3EA5X5Y0 456 aa4.02□□□□□ -1.77
HIGD1C-201ENST00000398455 ANXA2P2A6NMY6 339 aa4.02□□□□□ -1.77
HIGD1C-201ENST00000398455 ENO4A6NNW6 628 aa4.02□□□□□ -1.77
HIGD1C-201ENST00000398455 TTC34A8MYJ7 566 aa4.02□□□□□ -1.77
HIGD1C-201ENST00000398455 IFNL4K9M1U5 179 aa4.02□□□□□ -1.77
HIGD1C-201ENST00000398455 IFIT3O14879 490 aaKnown RBP4.02□□□□□ -1.77
HIGD1C-201ENST00000398455 SPRY1O43609 319 aaPredicted RBP4.02□□□□□ -1.77
HIGD1C-201ENST00000398455 JTBO76095 146 aa4.02□□□□□ -1.77
HIGD1C-201ENST00000398455 SLCO2B1O94956 709 aa4.02□□□□□ -1.77
HIGD1C-201ENST00000398455 IGLV2-14P01704 120 aa4.02□□□□□ -1.77
HIGD1C-201ENST00000398455 HLA-DQA2P01906 255 aa4.02□□□□□ -1.77
HIGD1C-201ENST00000398455 TFP02787 698 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms