RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 SPATC1Q76KD6 591 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 GSTA5Q7RTV2 222 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 LRRTM4Q86VH4 590 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 TMEM200AQ86VY9 491 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 ARHGEF19Q8IW93 802 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 FAM71AQ8IYT1 594 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 MAML2Q8IZL2 1156 aaPredicted RBP6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 OR52N1Q8NH53 320 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.6□□□□□ -1.351e-16■□□□□ 8.7
TM9SF4-202ENST00000398022 C1orf54Q8WWF1 131 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 SEC22CQ9BRL7 303 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 FBRSL1Q9HCM7 1045 aaKnown RBP6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 MRPL47Q9HD33 250 aaKnown RBP6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 BRD7Q9NPI1 651 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 C20orf96Q9NUD7 363 aaPredicted RBP6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 TMOD2Q9NZR1 351 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 IPO11Q9UI26 975 aaKnown RBP6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 ANAPC7Q9UJX3 599 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 SNX7Q9UNH6 387 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 DIMT1Q9UNQ2 313 aaKnown RBP6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 PIN4Q9Y237 131 aaKnown RBP6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 ACTL7BQ9Y614 415 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 IGLV3-22A0A075B6J6 115 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 H0YAE9 185 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 JRKO75564 520 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 CABYRO75952 493 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 SGPL1O95470 568 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 FHP07954 510 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 UMPSP11172 480 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 CPEP16870 476 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 RHCEP18577 417 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 RAB4AP20338 218 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 ATP6V1C1P21283 382 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 PTX3P26022 381 aaPredicted RBP6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 GNA15P30679 374 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 MC4RP32245 332 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 NPY2RP49146 381 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 CDR2Q01850 454 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 RHDQ02161 417 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 CXCL9Q07325 125 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 PTK6Q13882 451 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 POLD3Q15054 466 aaPredicted RBP6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 DOK7Q18PE1 504 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 TNFAIP8L3Q5GJ75 292 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 MAEAQ7L5Y9 396 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 PRUNE1Q86TP1 453 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 VSIG10LQ86VR7 867 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 CERS5Q8N5B7 392 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 B3GALT6Q96L58 329 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 BCL2L14Q9BZR8 327 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 CXXC1Q9P0U4 656 aaPredicted RBP6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 TDRKHQ9Y2W6 561 aaKnown RBP6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 PPIL1Q9Y3C6 166 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 LRRC42Q9Y546 428 aa6.6□□□□□ -1.35
TM9SF4-202ENST00000398022 OR5K3A6NET4 321 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 PRR23AA6NEV1 266 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 A8MXE2 369 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 KBTBD13C9JR72 458 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 CA12O43570 354 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 HCRTR2O43614 444 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 PCDH8O95206 1070 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 BMP2P12643 396 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 GNSP15586 552 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 ATP2A2P16615 1042 aaKnown RBP6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 NPR3P17342 541 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 CKMT2P17540 419 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 CCNFP41002 786 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 RECQLP46063 649 aaPredicted RBP6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 FNTBP49356 437 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 ITGA8P53708 1063 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 RAC3P60763 192 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 ECT2LQ008S8 904 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 TNFAIP2Q03169 654 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 FADDQ13158 208 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 PLCL1Q15111 1095 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 ADIPOQQ15848 244 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 KYNUQ16719 465 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 KCTD19Q17RG1 926 aaPredicted RBP6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 DGKKQ5KSL6 1271 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 RNF43Q68DV7 783 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 PRMT9Q6P2P2 845 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 SRRM1Q8IYB3 904 aaKnown RBP6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 WNT8BQ93098 351 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 VPS33AQ96AX1 596 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 ZBED3Q96IU2 234 aaPredicted RBP6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 COX4I2Q96KJ9 171 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 OR1F2PQ96R84 312 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 SF3B5Q9BWJ5 86 aaKnown RBP6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 WDR26Q9H7D7 661 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 LRRC4CQ9HCJ2 640 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 DIABLOQ9NR28 239 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 KRT84Q9NSB2 600 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 DCDC2Q9UHG0 476 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 CNOT11Q9UKZ1 510 aaKnown RBP6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 FAM47DPA6NHR8 397 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 DCTN3O75935 186 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 PGLSO95336 258 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 GJB6O95452 261 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 ALDH1A1P00352 501 aa6.59□□□□□ -1.35
TM9SF4-202ENST00000398022 DHFRP00374 187 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms