RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 CTBP1Q13363 440 aa19.47■□□□□ 0.71
PDLIM2-205ENST00000397761 PON2Q15165 354 aa19.47■□□□□ 0.71
PDLIM2-205ENST00000397761 TYSND1Q2T9J0 566 aa19.47■□□□□ 0.71
PDLIM2-205ENST00000397761 IER5LQ5T953 404 aa19.47■□□□□ 0.71
PDLIM2-205ENST00000397761 PARS2Q7L3T8 475 aaKnown RBP19.47■□□□□ 0.71
PDLIM2-205ENST00000397761 TSPAN33Q86UF1 283 aa19.47■□□□□ 0.71
PDLIM2-205ENST00000397761 CHPFQ8IZ52 775 aa19.47■□□□□ 0.71
PDLIM2-205ENST00000397761 ARFGAP2Q8N6H7 521 aa19.47■□□□□ 0.71
PDLIM2-205ENST00000397761 MARCH4Q9P2E8 410 aaPredicted RBP19.47■□□□□ 0.71
PDLIM2-205ENST00000397761 FKBPLQ9UIM3 349 aa19.47■□□□□ 0.71
PDLIM2-205ENST00000397761 OR51F1A6NGY5 319 aa19.46■□□□□ 0.71
PDLIM2-205ENST00000397761 POLR3GO15318 223 aaPredicted RBP19.46■□□□□ 0.71
PDLIM2-205ENST00000397761 CD3EAPO15446 510 aaKnown RBP19.46■□□□□ 0.71
PDLIM2-205ENST00000397761 CYP2A6P11509 494 aaPredicted RBP19.46■□□□□ 0.71
PDLIM2-205ENST00000397761 HPDP32754 393 aaPredicted RBP19.46■□□□□ 0.71
PDLIM2-205ENST00000397761 MAGEA12P43365 314 aa19.46■□□□□ 0.71
PDLIM2-205ENST00000397761 CSRP3P50461 194 aa19.46■□□□□ 0.71
PDLIM2-205ENST00000397761 SLC18A1P54219 525 aa19.46■□□□□ 0.71
PDLIM2-205ENST00000397761 MPP1Q00013 466 aa19.46■□□□□ 0.71
PDLIM2-205ENST00000397761 PEX6Q13608 980 aa19.46■□□□□ 0.71
PDLIM2-205ENST00000397761 BMPR2Q13873 1038 aa19.46■□□□□ 0.71
PDLIM2-205ENST00000397761 LRRC66Q68CR7 880 aa19.46■□□□□ 0.71
PDLIM2-205ENST00000397761 MRNIPQ6NTE8 343 aa19.46■□□□□ 0.71
PDLIM2-205ENST00000397761 MICALCLQ6ZW33 695 aa19.46■□□□□ 0.71
PDLIM2-205ENST00000397761 DPPA4Q7L190 304 aa19.46■□□□□ 0.71
PDLIM2-205ENST00000397761 PTAR1Q7Z6K3 402 aaPredicted RBP19.46■□□□□ 0.71
PDLIM2-205ENST00000397761 ARRDC3Q96B67 414 aa19.46■□□□□ 0.71
PDLIM2-205ENST00000397761 ALKBH8Q96BT7 664 aaKnown RBP19.46■□□□□ 0.71
PDLIM2-205ENST00000397761 VPS39Q96JC1 886 aa19.46■□□□□ 0.71
PDLIM2-205ENST00000397761 SERAC1Q96JX3 654 aa19.46■□□□□ 0.71
PDLIM2-205ENST00000397761 GPR22Q99680 433 aa19.46■□□□□ 0.71
PDLIM2-205ENST00000397761 RSPH9Q9H1X1 276 aaPredicted RBP19.46■□□□□ 0.71
PDLIM2-205ENST00000397761 PCDH12Q9NPG4 1184 aa19.46■□□□□ 0.71
PDLIM2-205ENST00000397761 ZDHHC4Q9NPG8 344 aa19.46■□□□□ 0.71
PDLIM2-205ENST00000397761 CATSPERZQ9NTU4 200 aa19.46■□□□□ 0.71
PDLIM2-205ENST00000397761 KPNA3O00505 521 aaPredicted RBP19.45■□□□□ 0.7
PDLIM2-205ENST00000397761 GAPDHSO14556 408 aaPredicted RBP19.45■□□□□ 0.7
PDLIM2-205ENST00000397761 PRPF4O43172 522 aaKnown RBP eCLIP19.45■□□□□ 0.7
PDLIM2-205ENST00000397761 S1PR4O95977 384 aa19.45■□□□□ 0.7
PDLIM2-205ENST00000397761 MT-ND3P03897 115 aa19.45■□□□□ 0.7
PDLIM2-205ENST00000397761 ALDOAP04075 364 aaKnown RBP19.45■□□□□ 0.7
PDLIM2-205ENST00000397761 BRAFP15056 766 aa19.45■□□□□ 0.7
PDLIM2-205ENST00000397761 NTSR1P30989 418 aa19.45■□□□□ 0.7
PDLIM2-205ENST00000397761 VIPR1P32241 457 aa19.45■□□□□ 0.7
PDLIM2-205ENST00000397761 MMP12P39900 470 aa19.45■□□□□ 0.7
PDLIM2-205ENST00000397761 CCNFP41002 786 aa19.45■□□□□ 0.7
PDLIM2-205ENST00000397761 POLD2P49005 469 aa19.45■□□□□ 0.7
PDLIM2-205ENST00000397761 STC1P52823 247 aa19.45■□□□□ 0.7
PDLIM2-205ENST00000397761 PTSQ03393 145 aa19.45■□□□□ 0.7
PDLIM2-205ENST00000397761 TFF2Q03403 129 aa19.45■□□□□ 0.7
PDLIM2-205ENST00000397761 GRSF1Q12849 480 aaKnown RBP eCLIP19.45■□□□□ 0.7
PDLIM2-205ENST00000397761 MROH9Q5TGP6 573 aa19.45■□□□□ 0.7
PDLIM2-205ENST00000397761 PPP1R16AQ96I34 528 aa19.45■□□□□ 0.7
PDLIM2-205ENST00000397761 TCF12Q99081 682 aa19.45■□□□□ 0.7
PDLIM2-205ENST00000397761 CNOT10Q9H9A5 744 aaKnown RBP19.45■□□□□ 0.7
PDLIM2-205ENST00000397761 C1QTNF3-AMACRE9PGA6 284 aa19.44■□□□□ 0.7
PDLIM2-205ENST00000397761 SPINT1O43278 529 aa19.44■□□□□ 0.7
PDLIM2-205ENST00000397761 TYROBPO43914 113 aa19.44■□□□□ 0.7
PDLIM2-205ENST00000397761 SLC4A1P02730 911 aa19.44■□□□□ 0.7
PDLIM2-205ENST00000397761 KRT4P19013 534 aa19.44■□□□□ 0.7
PDLIM2-205ENST00000397761 TIE1P35590 1138 aa19.44■□□□□ 0.7
PDLIM2-205ENST00000397761 CD151P48509 253 aa19.44■□□□□ 0.7
PDLIM2-205ENST00000397761 METAP1P53582 386 aa19.44■□□□□ 0.7
PDLIM2-205ENST00000397761 MRPS21P82921 87 aaKnown RBP19.44■□□□□ 0.7
PDLIM2-205ENST00000397761 RALGDSQ12967 914 aa19.44■□□□□ 0.7
PDLIM2-205ENST00000397761 SEMA3AQ14563 771 aa19.44■□□□□ 0.7
PDLIM2-205ENST00000397761 RAVER1Q8IY67 606 aaKnown RBP19.44■□□□□ 0.7
PDLIM2-205ENST00000397761 BANPQ8N9N5 519 aa19.44■□□□□ 0.7
PDLIM2-205ENST00000397761 IL17RCQ8NAC3 791 aa19.44■□□□□ 0.7
PDLIM2-205ENST00000397761 ACMSDQ8TDX5 336 aa19.44■□□□□ 0.7
PDLIM2-205ENST00000397761 SMC6Q96SB8 1091 aa19.44■□□□□ 0.7
PDLIM2-205ENST00000397761 HDAC8Q9BY41 377 aa19.44■□□□□ 0.7
PDLIM2-205ENST00000397761 CD248Q9HCU0 757 aa19.44■□□□□ 0.7
PDLIM2-205ENST00000397761 BPIFA1Q9NP55 256 aa19.44■□□□□ 0.7
PDLIM2-205ENST00000397761 MKS1Q9NXB0 559 aa19.44■□□□□ 0.7
PDLIM2-205ENST00000397761 NFKBIL1Q9UBC1 381 aaPredicted RBP19.44■□□□□ 0.7
PDLIM2-205ENST00000397761 DUSP12Q9UNI6 340 aa19.44■□□□□ 0.7
PDLIM2-205ENST00000397761 TRPM6Q9BX84 2022 aa19.44■□□□□ 0.7
PDLIM2-205ENST00000397761 AREL1O15033 823 aa19.43■□□□□ 0.7
PDLIM2-205ENST00000397761 F7P08709 466 aaPredicted RBP19.43■□□□□ 0.7
PDLIM2-205ENST00000397761 C1SP09871 688 aa19.43■□□□□ 0.7
PDLIM2-205ENST00000397761 BPIP17213 487 aa19.43■□□□□ 0.7
PDLIM2-205ENST00000397761 MC4RP32245 332 aa19.43■□□□□ 0.7
PDLIM2-205ENST00000397761 SEC13P55735 322 aa19.43■□□□□ 0.7
PDLIM2-205ENST00000397761 CCINQ13939 588 aa19.43■□□□□ 0.7
PDLIM2-205ENST00000397761 MPP2Q14168 576 aa19.43■□□□□ 0.7
PDLIM2-205ENST00000397761 FBXO43Q4G163 708 aa19.43■□□□□ 0.7
PDLIM2-205ENST00000397761 SLC44A4Q53GD3 710 aa19.43■□□□□ 0.7
PDLIM2-205ENST00000397761 FASTKD1Q53R41 847 aaKnown RBP19.43■□□□□ 0.7
PDLIM2-205ENST00000397761 C2orf27AQ580R0 203 aa19.43■□□□□ 0.7
PDLIM2-205ENST00000397761 LRRC73Q5JTD7 316 aa19.43■□□□□ 0.7
PDLIM2-205ENST00000397761 ZDHHC20Q5W0Z9 365 aa19.43■□□□□ 0.7
PDLIM2-205ENST00000397761 TRMT11Q7Z4G4 463 aaKnown RBP19.43■□□□□ 0.7
PDLIM2-205ENST00000397761 TTC7BQ86TV6 843 aa19.43■□□□□ 0.7
PDLIM2-205ENST00000397761 ADHFE1Q8IWW8 467 aa19.43■□□□□ 0.7
PDLIM2-205ENST00000397761 DCLK2Q8N568 766 aa19.43■□□□□ 0.7
PDLIM2-205ENST00000397761 DTX3LQ8TDB6 740 aa19.43■□□□□ 0.7
PDLIM2-205ENST00000397761 ATXN2LQ8WWM7 1075 aaKnown RBP19.43■□□□□ 0.7
PDLIM2-205ENST00000397761 PLEKHG4BQ96PX9 1271 aa19.43■□□□□ 0.7
PDLIM2-205ENST00000397761 FBRSQ9HAH7 460 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms