RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 ZBTB14O43829 449 aa11.17□□□□□ -0.62
IFT140-202ENST00000397417 OR56A5P0C7T3 313 aa11.17□□□□□ -0.62
IFT140-202ENST00000397417 PRSS56P0CW18 603 aa11.17□□□□□ -0.62
IFT140-202ENST00000397417 ESRRGP62508 458 aa11.17□□□□□ -0.62
IFT140-202ENST00000397417 MS4A13Q5J8X5 152 aa11.17□□□□□ -0.62
IFT140-202ENST00000397417 SMYD5Q6GMV2 418 aa11.17□□□□□ -0.62
IFT140-202ENST00000397417 C12orf50Q8NA57 414 aaPredicted RBP11.17□□□□□ -0.62
IFT140-202ENST00000397417 SIDT2Q8NBJ9 832 aaKnown RBP11.17□□□□□ -0.62
IFT140-202ENST00000397417 PNPT1Q8TCS8 783 aaKnown RBP11.17□□□□□ -0.62
IFT140-202ENST00000397417 ZNF398Q8TD17 642 aa11.17□□□□□ -0.62
IFT140-202ENST00000397417 MCOLN3Q8TDD5 553 aa11.17□□□□□ -0.62
IFT140-202ENST00000397417 CSGALNACT1Q8TDX6 532 aa11.17□□□□□ -0.62
IFT140-202ENST00000397417 C11orf49Q9H6J7 331 aa11.17□□□□□ -0.62
IFT140-202ENST00000397417 IMP3Q9NV31 184 aaKnown RBP11.17□□□□□ -0.62
IFT140-202ENST00000397417 SLC12A4Q9UP95 1085 aa11.17□□□□□ -0.62
IFT140-202ENST00000397417 ASF1AQ9Y294 204 aa11.17□□□□□ -0.62
IFT140-202ENST00000397417 GPSM3Q9Y4H4 160 aa11.17□□□□□ -0.62
IFT140-202ENST00000397417 GCATO75600 419 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 ALOX15P16050 662 aaPredicted RBP11.16□□□□□ -0.62
IFT140-202ENST00000397417 PSMD8P48556 350 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 TRIP4Q15650 581 aaPredicted RBP11.16□□□□□ -0.62
IFT140-202ENST00000397417 GK5Q6ZS86 529 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 TMEM173Q86WV6 379 aaPredicted RBP11.16□□□□□ -0.62
IFT140-202ENST00000397417 HEXDCQ8WVB3 486 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 SYT11Q9BT88 431 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 TXLNGYQ9BZA5 131 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 PCDH12Q9NPG4 1184 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 COPG2Q9UBF2 871 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 FBXL21Q9UKT6 434 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 EIF3LQ9Y262 564 aaKnown RBP11.16□□□□□ -0.62
IFT140-202ENST00000397417 GRXCR1A8MXD5 290 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 SERPINI2O75830 405 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 NDST3O95803 873 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 ABHD2P08910 425 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 PROZP22891 400 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 CES1P23141 567 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 ATP5F1P24539 256 aaPredicted RBP11.16□□□□□ -0.62
IFT140-202ENST00000397417 ATP6V1E1P36543 226 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 CACHD1Q5VU97 1274 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 SNX30Q5VWJ9 437 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 TRNP1Q6NT89 227 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 TRIM74Q86UV6 250 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 ZNF461Q8TAF7 563 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 DACT3Q96B18 629 aaPredicted RBP11.16□□□□□ -0.62
IFT140-202ENST00000397417 BTBD10Q9BSF8 475 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 LNPEPQ9UIQ6 1025 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 FAF1Q9UNN5 650 aaPredicted RBP11.16□□□□□ -0.62
IFT140-202ENST00000397417 RIF1Q5UIP0 2472 aaKnown RBP11.16□□□□□ -0.62
IFT140-202ENST00000397417 A0A0G2JN53 185 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 IFRD1O00458 451 aaPredicted RBP11.16□□□□□ -0.62
IFT140-202ENST00000397417 INSIG1O15503 277 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 ITM2AO43736 263 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 DDX5P17844 614 aaKnown RBP11.16□□□□□ -0.62
IFT140-202ENST00000397417 AQP1P29972 269 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 NCALDP61601 193 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 TRAF2Q12933 501 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 HNRNPDQ14103 355 aaKnown RBP11.16□□□□□ -0.62
IFT140-202ENST00000397417 TEAD2Q15562 447 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 ADGRD1Q6QNK2 874 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 CCDC81Q6ZN84 652 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 RIN3Q8TB24 985 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 FBXO30Q8TB52 745 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 TRIM4Q9C037 500 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 ROGDIQ9GZN7 287 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 SLC25A51Q9H1U9 297 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 KLHL3Q9UH77 587 aa11.16□□□□□ -0.62
IFT140-202ENST00000397417 PSMD12O00232 456 aaPredicted RBP11.15□□□□□ -0.62
IFT140-202ENST00000397417 GPR39O43194 453 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 LDB2O43679 373 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 FGF1P05230 155 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 ALADP13716 330 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 CCNCP24863 283 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 SKIV2L2P42285 1042 aaKnown RBP11.15□□□□□ -0.62
IFT140-202ENST00000397417 NRIP1P48552 1158 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 THOP1P52888 689 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 POLR2LP62875 67 aaKnown RBP11.15□□□□□ -0.62
IFT140-202ENST00000397417 GRM2Q14416 872 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 CDHR3Q6ZTQ4 885 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 ST13P4Q8IZP2 240 aaPredicted RBP11.15□□□□□ -0.62
IFT140-202ENST00000397417 CCDC126Q96EE4 140 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 RNF145Q96MT1 663 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 TRIM15Q9C019 465 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 EPB41L4BQ9H329 900 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 SLCO3A1Q9UIG8 710 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 PADI4Q9UM07 663 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 TCAF1Q9Y4C2 921 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 LRPAP1P30533 357 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 GDF5P43026 501 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 ADGRF1Q5T601 910 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 LYSMD3Q7Z3D4 306 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 AMIGO2Q86SJ2 522 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 NIPA2Q8N8Q9 360 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 OR10G6Q8NH81 332 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 OR14C36Q8NHC7 312 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 GID8Q9NWU2 228 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 HCFC1R1Q9NWW0 138 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 GJD2Q9UKL4 321 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 NDUFAF1Q9Y375 327 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 HDAC3O15379 428 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 TEX28O15482 410 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms