RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 TSHRP16473 764 aa25.33■■□□□ 1.65
TSPAN4-207ENST00000397411 EPHA8P29322 1005 aaPredicted RBP25.33■■□□□ 1.65
TSPAN4-207ENST00000397411 GRK6P43250 576 aa25.33■■□□□ 1.65
TSPAN4-207ENST00000397411 GPR1P46091 355 aa25.33■■□□□ 1.65
TSPAN4-207ENST00000397411 HNRNPKP61978 463 aaKnown RBP eCLIP25.33■■□□□ 1.658e-6■■■■□ 19.7
TSPAN4-207ENST00000397411 NFATC4Q14934 902 aa25.33■■□□□ 1.65
TSPAN4-207ENST00000397411 CCNG2Q16589 344 aa25.33■■□□□ 1.65
TSPAN4-207ENST00000397411 SIRPB2Q5JXA9 342 aa25.33■■□□□ 1.65
TSPAN4-207ENST00000397411 ESRP1Q6NXG1 681 aaKnown RBP25.33■■□□□ 1.65
TSPAN4-207ENST00000397411 MACC1Q6ZN28 852 aa25.33■■□□□ 1.65
TSPAN4-207ENST00000397411 LYSMD3Q7Z3D4 306 aa25.33■■□□□ 1.65
TSPAN4-207ENST00000397411 TECPR1Q7Z6L1 1165 aa25.33■■□□□ 1.65
TSPAN4-207ENST00000397411 SAP25Q8TEE9 199 aa25.33■■□□□ 1.65
TSPAN4-207ENST00000397411 CFAP54Q96N23 3096 aa25.33■■□□□ 1.65
TSPAN4-207ENST00000397411 ABCG8Q9H221 673 aa25.33■■□□□ 1.65
TSPAN4-207ENST00000397411 WDR26Q9H7D7 661 aa25.33■■□□□ 1.65
TSPAN4-207ENST00000397411 PHPT1Q9NRX4 125 aaPredicted RBP25.33■■□□□ 1.65
TSPAN4-207ENST00000397411 GPR27Q9NS67 375 aa25.33■■□□□ 1.65
TSPAN4-207ENST00000397411 ZKSCAN5Q9Y2L8 839 aa25.33■■□□□ 1.65
TSPAN4-207ENST00000397411 USP27XA6NNY8 438 aa25.32■■□□□ 1.64
TSPAN4-207ENST00000397411 AGTP01019 485 aa25.32■■□□□ 1.64
TSPAN4-207ENST00000397411 ATP1A1P05023 1023 aaKnown RBP25.32■■□□□ 1.64
TSPAN4-207ENST00000397411 JUNDP17535 347 aa25.32■■□□□ 1.64
TSPAN4-207ENST00000397411 HLA-DPA1P20036 260 aa25.32■■□□□ 1.64
TSPAN4-207ENST00000397411 KELP23276 732 aa25.32■■□□□ 1.64
TSPAN4-207ENST00000397411 PPARDQ03181 441 aa25.32■■□□□ 1.64
TSPAN4-207ENST00000397411 HS1BP3Q53T59 392 aa25.32■■□□□ 1.64
TSPAN4-207ENST00000397411 RFLNAQ6ZTI6 216 aa25.32■■□□□ 1.64
TSPAN4-207ENST00000397411 BTN2A2Q8WVV5 523 aa25.32■■□□□ 1.64
TSPAN4-207ENST00000397411 WDR92Q96MX6 357 aa25.32■■□□□ 1.64
TSPAN4-207ENST00000397411 SLC13A1Q9BZW2 595 aa25.32■■□□□ 1.64
TSPAN4-207ENST00000397411 HOMER3Q9NSC5 361 aa25.32■■□□□ 1.64
TSPAN4-207ENST00000397411 ZNF711Q9Y462 761 aa25.32■■□□□ 1.64
TSPAN4-207ENST00000397411 PSMD3O43242 534 aa25.31■■□□□ 1.64
TSPAN4-207ENST00000397411 CSF2P04141 144 aa25.31■■□□□ 1.64
TSPAN4-207ENST00000397411 GDF10P55107 478 aa25.31■■□□□ 1.64
TSPAN4-207ENST00000397411 GNG11P61952 73 aa25.31■■□□□ 1.64
TSPAN4-207ENST00000397411 EIF2B5Q13144 721 aaKnown RBP25.31■■□□□ 1.64
TSPAN4-207ENST00000397411 SLC1A5Q15758 541 aa25.31■■□□□ 1.64
TSPAN4-207ENST00000397411 P3H1Q32P28 736 aa25.31■■□□□ 1.64
TSPAN4-207ENST00000397411 TPRG1LQ5T0D9 272 aa25.31■■□□□ 1.64
TSPAN4-207ENST00000397411 DBX2Q6ZNG2 339 aa25.31■■□□□ 1.64
TSPAN4-207ENST00000397411 ZNF765Q7L2R6 523 aa25.31■■□□□ 1.64
TSPAN4-207ENST00000397411 GSTA5Q7RTV2 222 aa25.31■■□□□ 1.64
TSPAN4-207ENST00000397411 RD3Q7Z3Z2 195 aa25.31■■□□□ 1.64
TSPAN4-207ENST00000397411 HID1Q8IV36 788 aa25.31■■□□□ 1.64
TSPAN4-207ENST00000397411 RAVER1Q8IY67 606 aaKnown RBP25.31■■□□□ 1.64
TSPAN4-207ENST00000397411 TAB3Q8N5C8 712 aaPredicted RBP25.31■■□□□ 1.64
TSPAN4-207ENST00000397411 EID2Q8N6I1 236 aa25.31■■□□□ 1.64
TSPAN4-207ENST00000397411 CCDC89Q8N998 374 aa25.31■■□□□ 1.64
TSPAN4-207ENST00000397411 NAP1L3Q99457 506 aaPredicted RBP25.31■■□□□ 1.64
TSPAN4-207ENST00000397411 CDC6Q99741 560 aa25.31■■□□□ 1.64
TSPAN4-207ENST00000397411 FAM83DQ9H4H8 585 aa25.31■■□□□ 1.64
TSPAN4-207ENST00000397411 KLQ9UEF7 1012 aa25.31■■□□□ 1.64
TSPAN4-207ENST00000397411 MOSPD1Q9UJG1 213 aa25.31■■□□□ 1.64
TSPAN4-207ENST00000397411 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.31■■□□□ 1.64
TSPAN4-207ENST00000397411 RGSL1A5PLK6 1076 aa25.3■■□□□ 1.64
TSPAN4-207ENST00000397411 NEMP2A6NFY4 417 aa25.3■■□□□ 1.64
TSPAN4-207ENST00000397411 K7ESM1 405 aa25.3■■□□□ 1.64
TSPAN4-207ENST00000397411 GIPC1O14908 333 aa25.3■■□□□ 1.64
TSPAN4-207ENST00000397411 PIAS2O75928 621 aa25.3■■□□□ 1.64
TSPAN4-207ENST00000397411 FGF1P05230 155 aa25.3■■□□□ 1.64
TSPAN4-207ENST00000397411 PYGLP06737 847 aa25.3■■□□□ 1.64
TSPAN4-207ENST00000397411 TRIM23P36406 574 aa25.3■■□□□ 1.64
TSPAN4-207ENST00000397411 CHRNA4P43681 627 aa25.3■■□□□ 1.64
TSPAN4-207ENST00000397411 SPINT3P49223 89 aa25.3■■□□□ 1.64
TSPAN4-207ENST00000397411 BLKP51451 505 aa25.3■■□□□ 1.64
TSPAN4-207ENST00000397411 DPTQ07507 201 aa25.3■■□□□ 1.64
TSPAN4-207ENST00000397411 OASLQ15646 514 aaKnown RBP25.3■■□□□ 1.64
TSPAN4-207ENST00000397411 TRIP6Q15654 476 aaKnown RBP25.3■■□□□ 1.64
TSPAN4-207ENST00000397411 CDKN3Q16667 212 aa25.3■■□□□ 1.64
TSPAN4-207ENST00000397411 BLOC1S5Q8TDH9 187 aa25.3■■□□□ 1.64
TSPAN4-207ENST00000397411 SCAMP4Q969E2 229 aa25.3■■□□□ 1.64
TSPAN4-207ENST00000397411 TSACCQ96A04 125 aaPredicted RBP25.3■■□□□ 1.64
TSPAN4-207ENST00000397411 FUBP1Q96AE4 644 aaKnown RBP25.3■■□□□ 1.64
TSPAN4-207ENST00000397411 RIOK2Q9BVS4 552 aaKnown RBP25.3■■□□□ 1.64
TSPAN4-207ENST00000397411 TRABDQ9H4I3 376 aa25.3■■□□□ 1.64
TSPAN4-207ENST00000397411 RAD18Q9NS91 495 aa25.3■■□□□ 1.64
TSPAN4-207ENST00000397411 HACD3Q9P035 362 aa25.3■■□□□ 1.64
TSPAN4-207ENST00000397411 PCOLCE2Q9UKZ9 415 aa25.3■■□□□ 1.64
TSPAN4-207ENST00000397411 BTBD3Q9Y2F9 522 aa25.3■■□□□ 1.64
TSPAN4-207ENST00000397411 PCNX2A6NKB5 2137 aa25.3■■□□□ 1.64
TSPAN4-207ENST00000397411 RASGRP1O95267 797 aa25.29■■□□□ 1.64
TSPAN4-207ENST00000397411 TNFP01375 233 aa25.29■■□□□ 1.64
TSPAN4-207ENST00000397411 HOXC4P09017 264 aaPredicted RBP25.29■■□□□ 1.64
TSPAN4-207ENST00000397411 ATXN1LP0C7T5 689 aaKnown RBP25.29■■□□□ 1.64
TSPAN4-207ENST00000397411 CTSEP14091 401 aa25.29■■□□□ 1.64
TSPAN4-207ENST00000397411 NME1P15531 152 aaKnown RBP25.29■■□□□ 1.64
TSPAN4-207ENST00000397411 DGKAP23743 735 aa25.29■■□□□ 1.64
TSPAN4-207ENST00000397411 LMAN1P49257 510 aa25.29■■□□□ 1.64
TSPAN4-207ENST00000397411 KIAA1024LP59773 190 aa25.29■■□□□ 1.64
TSPAN4-207ENST00000397411 NLRP8Q86W28 1048 aa25.29■■□□□ 1.64
TSPAN4-207ENST00000397411 HEATR4Q86WZ0 1026 aa25.29■■□□□ 1.64
TSPAN4-207ENST00000397411 PHACTR4Q8IZ21 702 aa25.29■■□□□ 1.64
TSPAN4-207ENST00000397411 PELI3Q8N2H9 469 aa25.29■■□□□ 1.64
TSPAN4-207ENST00000397411 LMX1AQ8TE12 382 aa25.29■■□□□ 1.64
TSPAN4-207ENST00000397411 APOL2Q9BQE5 337 aa25.29■■□□□ 1.64
TSPAN4-207ENST00000397411 SPASTQ9UBP0 616 aa25.29■■□□□ 1.64
TSPAN4-207ENST00000397411 DRG1Q9Y295 367 aaKnown RBP25.29■■□□□ 1.64
TSPAN4-207ENST00000397411 LAMA1P25391 3075 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms