RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 CXorf49A8MYA2 514 aaPredicted RBP16.94■□□□□ 0.3
TSPAN4-205ENST00000397406 TCEA3O75764 348 aa16.94■□□□□ 0.3
TSPAN4-205ENST00000397406 C7P10643 843 aa16.94■□□□□ 0.3
TSPAN4-205ENST00000397406 LPOP22079 712 aaPredicted RBP16.94■□□□□ 0.3
TSPAN4-205ENST00000397406 LHCGRP22888 699 aa16.94■□□□□ 0.3
TSPAN4-205ENST00000397406 GCAP28676 217 aa16.94■□□□□ 0.3
TSPAN4-205ENST00000397406 IFFO1Q0D2I5 559 aa16.94■□□□□ 0.3
TSPAN4-205ENST00000397406 STARD3Q14849 445 aa16.94■□□□□ 0.3
TSPAN4-205ENST00000397406 LONRF1Q17RB8 773 aa16.94■□□□□ 0.3
TSPAN4-205ENST00000397406 FAM46CQ5VWP2 391 aa16.94■□□□□ 0.3
TSPAN4-205ENST00000397406 CRTC1Q6UUV9 634 aa16.94■□□□□ 0.3
TSPAN4-205ENST00000397406 TSPAN33Q86UF1 283 aa16.94■□□□□ 0.3
TSPAN4-205ENST00000397406 LONP2Q86WA8 852 aa16.94■□□□□ 0.3
TSPAN4-205ENST00000397406 PPP1R16AQ96I34 528 aa16.94■□□□□ 0.3
TSPAN4-205ENST00000397406 DNAJC1Q96KC8 554 aaKnown RBP16.94■□□□□ 0.3
TSPAN4-205ENST00000397406 CYTH2Q99418 400 aa16.94■□□□□ 0.3
TSPAN4-205ENST00000397406 PCDH12Q9NPG4 1184 aa16.94■□□□□ 0.3
TSPAN4-205ENST00000397406 NLE1Q9NVX2 485 aaPredicted RBP16.94■□□□□ 0.3
TSPAN4-205ENST00000397406 IL17CQ9P0M4 197 aa16.94■□□□□ 0.3
TSPAN4-205ENST00000397406 B4GALT6Q9UBX8 382 aa16.94■□□□□ 0.3
TSPAN4-205ENST00000397406 C1orf232A0A0U1RR37 186 aa16.93■□□□□ 0.3
TSPAN4-205ENST00000397406 EXOC1LA0A1B0GW35 172 aa16.93■□□□□ 0.3
TSPAN4-205ENST00000397406 SPINT1O43278 529 aa16.93■□□□□ 0.3
TSPAN4-205ENST00000397406 PIAS1O75925 651 aa16.93■□□□□ 0.3
TSPAN4-205ENST00000397406 VAPBO95292 243 aa16.93■□□□□ 0.3
TSPAN4-205ENST00000397406 CLDN7O95471 211 aa16.93■□□□□ 0.3
TSPAN4-205ENST00000397406 ERVK-10P10266 1014 aa16.93■□□□□ 0.3
TSPAN4-205ENST00000397406 PAMP19021 973 aa16.93■□□□□ 0.3
TSPAN4-205ENST00000397406 DRD3P35462 400 aa16.93■□□□□ 0.3
TSPAN4-205ENST00000397406 HMGCLP35914 325 aa16.93■□□□□ 0.3
TSPAN4-205ENST00000397406 ARSDP51689 593 aa16.93■□□□□ 0.3
TSPAN4-205ENST00000397406 RPS14P62263 151 aaKnown RBP16.93■□□□□ 0.3
TSPAN4-205ENST00000397406 FAM193AP78312 1265 aa16.93■□□□□ 0.3
TSPAN4-205ENST00000397406 PDE1BQ01064 536 aa16.93■□□□□ 0.3
TSPAN4-205ENST00000397406 SEMG2Q02383 582 aa16.93■□□□□ 0.3
TSPAN4-205ENST00000397406 MGAT5Q09328 741 aa16.93■□□□□ 0.3
TSPAN4-205ENST00000397406 CST6Q15828 149 aa16.93■□□□□ 0.3
TSPAN4-205ENST00000397406 SKIDA1Q1XH10 827 aa16.93■□□□□ 0.3
TSPAN4-205ENST00000397406 KLHL38Q2WGJ6 581 aa16.93■□□□□ 0.3
TSPAN4-205ENST00000397406 EOGTQ5NDL2 527 aa16.93■□□□□ 0.3
TSPAN4-205ENST00000397406 ZNF776Q68DI1 518 aaPredicted RBP16.93■□□□□ 0.3
TSPAN4-205ENST00000397406 PDPK2PQ6A1A2 396 aa16.93■□□□□ 0.3
TSPAN4-205ENST00000397406 TTC7BQ86TV6 843 aa16.93■□□□□ 0.3
TSPAN4-205ENST00000397406 WDR5BQ86VZ2 330 aa16.93■□□□□ 0.3
TSPAN4-205ENST00000397406 OR4K2Q8NGD2 314 aa16.93■□□□□ 0.3
TSPAN4-205ENST00000397406 EPS8L3Q8TE67 593 aaKnown RBP16.93■□□□□ 0.3
TSPAN4-205ENST00000397406 ZBTB9Q96C00 473 aa16.93■□□□□ 0.3
TSPAN4-205ENST00000397406 CCDC77Q9BR77 488 aa16.93■□□□□ 0.3
TSPAN4-205ENST00000397406 HDAC8Q9BY41 377 aa16.93■□□□□ 0.3
TSPAN4-205ENST00000397406 GPR63Q9BZJ6 419 aa16.93■□□□□ 0.3
TSPAN4-205ENST00000397406 ZFYVE1Q9HBF4 777 aa16.93■□□□□ 0.3
TSPAN4-205ENST00000397406 VPS18Q9P253 973 aa16.93■□□□□ 0.3
TSPAN4-205ENST00000397406 FETUBQ9UGM5 382 aa16.93■□□□□ 0.3
TSPAN4-205ENST00000397406 PLXNA2O75051 1894 aa16.93■□□□□ 0.3
TSPAN4-205ENST00000397406 A8MX80 341 aa16.92■□□□□ 0.3
TSPAN4-205ENST00000397406 PLK4O00444 970 aa16.92■□□□□ 0.3
TSPAN4-205ENST00000397406 CCL22O00626 93 aa16.92■□□□□ 0.3
TSPAN4-205ENST00000397406 MID1O15344 667 aa16.92■□□□□ 0.3
TSPAN4-205ENST00000397406 RNASEH1O60930 286 aaKnown RBP16.92■□□□□ 0.3
TSPAN4-205ENST00000397406 RPP40O75818 363 aaKnown RBP16.92■□□□□ 0.3
TSPAN4-205ENST00000397406 ADH1BP00325 375 aa16.92■□□□□ 0.3
TSPAN4-205ENST00000397406 SLC4A1P02730 911 aa16.92■□□□□ 0.3
TSPAN4-205ENST00000397406 CYP2A6P11509 494 aaPredicted RBP16.92■□□□□ 0.3
TSPAN4-205ENST00000397406 ADRB3P13945 408 aa16.92■□□□□ 0.3
TSPAN4-205ENST00000397406 VIPR1P32241 457 aa16.92■□□□□ 0.3
TSPAN4-205ENST00000397406 MMP12P39900 470 aa16.92■□□□□ 0.3
TSPAN4-205ENST00000397406 ID4P47928 161 aa16.92■□□□□ 0.3
TSPAN4-205ENST00000397406 NEK3P51956 506 aa16.92■□□□□ 0.3
TSPAN4-205ENST00000397406 RALGDSQ12967 914 aa16.92■□□□□ 0.3
TSPAN4-205ENST00000397406 CEP85LQ5SZL2 805 aa16.92■□□□□ 0.3
TSPAN4-205ENST00000397406 LRRC66Q68CR7 880 aa16.92■□□□□ 0.3
TSPAN4-205ENST00000397406 TMEM92Q6UXU6 159 aa16.92■□□□□ 0.3
TSPAN4-205ENST00000397406 MICALCLQ6ZW33 695 aa16.92■□□□□ 0.3
TSPAN4-205ENST00000397406 ERN2Q76MJ5 926 aaKnown RBP16.92■□□□□ 0.3
TSPAN4-205ENST00000397406 DPPA4Q7L190 304 aa16.92■□□□□ 0.3
TSPAN4-205ENST00000397406 KCNMB4Q86W47 210 aa16.92■□□□□ 0.3
TSPAN4-205ENST00000397406 AADATQ8N5Z0 425 aa16.92■□□□□ 0.3
TSPAN4-205ENST00000397406 C19orf43Q9BQ61 176 aa16.92■□□□□ 0.3
TSPAN4-205ENST00000397406 ROPN1BQ9BZX4 212 aaPredicted RBP16.92■□□□□ 0.3
TSPAN4-205ENST00000397406 MKRN2Q9H000 416 aaKnown RBP16.92■□□□□ 0.3
TSPAN4-205ENST00000397406 ROPN1Q9HAT0 212 aaPredicted RBP16.92■□□□□ 0.3
TSPAN4-205ENST00000397406 DYRK4Q9NR20 520 aa16.92■□□□□ 0.3
TSPAN4-205ENST00000397406 C20orf96Q9NUD7 363 aaPredicted RBP16.92■□□□□ 0.3
TSPAN4-205ENST00000397406 GGT7Q9UJ14 662 aa16.92■□□□□ 0.3
TSPAN4-205ENST00000397406 PLXNB3Q9ULL4 1909 aa16.91■□□□□ 0.3
TSPAN4-205ENST00000397406 AREL1O15033 823 aa16.91■□□□□ 0.3
TSPAN4-205ENST00000397406 STX7O15400 261 aaKnown RBP16.91■□□□□ 0.3
TSPAN4-205ENST00000397406 SLC7A4O43246 635 aa16.91■□□□□ 0.3
TSPAN4-205ENST00000397406 IVLP07476 585 aa16.91■□□□□ 0.3
TSPAN4-205ENST00000397406 ZNF30P17039 623 aa16.91■□□□□ 0.3
TSPAN4-205ENST00000397406 C5AR1P21730 350 aa16.91■□□□□ 0.3
TSPAN4-205ENST00000397406 XPAP23025 273 aaPredicted RBP16.91■□□□□ 0.3
TSPAN4-205ENST00000397406 NFKBIAP25963 317 aa16.91■□□□□ 0.3
TSPAN4-205ENST00000397406 P2RY2P41231 377 aa16.91■□□□□ 0.3
TSPAN4-205ENST00000397406 SUOXP51687 545 aa16.91■□□□□ 0.3
TSPAN4-205ENST00000397406 TMPRSS15P98073 1019 aa16.91■□□□□ 0.3
TSPAN4-205ENST00000397406 PTSQ03393 145 aa16.91■□□□□ 0.3
TSPAN4-205ENST00000397406 CNTN1Q12860 1018 aa16.91■□□□□ 0.3
TSPAN4-205ENST00000397406 SMAD1Q15797 465 aaKnown RBP16.91■□□□□ 0.3
TSPAN4-205ENST00000397406 FBXL19Q6PCT2 694 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms