RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 ETV5P41161 510 aa8.77□□□□□ -1.01
CAPN3-208ENST00000397204 PAPOLAP51003 745 aaKnown RBP8.77□□□□□ -1.01
CAPN3-208ENST00000397204 SRSF6Q13247 344 aaKnown RBP8.77□□□□□ -1.01
CAPN3-208ENST00000397204 TRA2AQ13595 282 aaKnown RBP eCLIP8.77□□□□□ -1.01
CAPN3-208ENST00000397204 PEX6Q13608 980 aa8.77□□□□□ -1.01
CAPN3-208ENST00000397204 RFTN1Q14699 578 aaPredicted RBP8.77□□□□□ -1.01
CAPN3-208ENST00000397204 CLEC16AQ2KHT3 1053 aa8.77□□□□□ -1.01
CAPN3-208ENST00000397204 DPCR1Q3MIW9 517 aa8.77□□□□□ -1.01
CAPN3-208ENST00000397204 PHF19Q5T6S3 580 aa8.77□□□□□ -1.01
CAPN3-208ENST00000397204 KCTD16Q68DU8 428 aa8.77□□□□□ -1.01
CAPN3-208ENST00000397204 SPECC1LQ69YQ0 1117 aa8.77□□□□□ -1.01
CAPN3-208ENST00000397204 PNCKQ6P2M8 343 aa8.77□□□□□ -1.01
CAPN3-208ENST00000397204 LYSMD3Q7Z3D4 306 aa8.77□□□□□ -1.01
CAPN3-208ENST00000397204 TMPRSS9Q7Z410 1059 aa8.77□□□□□ -1.01
CAPN3-208ENST00000397204 ZNF438Q7Z4V0 828 aa8.77□□□□□ -1.01
CAPN3-208ENST00000397204 ZSWIM9Q86XI8 627 aa8.77□□□□□ -1.01
CAPN3-208ENST00000397204 TSEN2Q8NCE0 465 aaKnown RBP8.77□□□□□ -1.01
CAPN3-208ENST00000397204 GPBAR1Q8TDU6 330 aa8.77□□□□□ -1.01
CAPN3-208ENST00000397204 EIF3CQ99613 913 aaKnown RBP8.77□□□□□ -1.01
CAPN3-208ENST00000397204 SLC25A18Q9H1K4 315 aa8.77□□□□□ -1.01
CAPN3-208ENST00000397204 ADNPQ9H2P0 1102 aa8.77□□□□□ -1.01
CAPN3-208ENST00000397204 SEMA6CQ9H3T2 930 aa8.77□□□□□ -1.01
CAPN3-208ENST00000397204 CLSTN2Q9H4D0 955 aa8.77□□□□□ -1.01
CAPN3-208ENST00000397204 WDR26Q9H7D7 661 aa8.77□□□□□ -1.01
CAPN3-208ENST00000397204 NLRC4Q9NPP4 1024 aa8.77□□□□□ -1.01
CAPN3-208ENST00000397204 MRPL40Q9NQ50 206 aaKnown RBP8.77□□□□□ -1.01
CAPN3-208ENST00000397204 SPATS2LQ9NUQ6 558 aaKnown RBP8.77□□□□□ -1.01
CAPN3-208ENST00000397204 TRNAU1APQ9NX07 287 aaKnown RBP8.77□□□□□ -1.01
CAPN3-208ENST00000397204 FOXJ2Q9P0K8 574 aa8.77□□□□□ -1.01
CAPN3-208ENST00000397204 SEPT3Q9UH03 358 aa8.77□□□□□ -1.01
CAPN3-208ENST00000397204 PCDHGA3Q9Y5H0 932 aa8.77□□□□□ -1.01
CAPN3-208ENST00000397204 SPTAN1Q13813 2472 aaKnown RBP8.77□□□□□ -1.01
CAPN3-208ENST00000397204 BSNQ9UPA5 3926 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 A0A1W2PQ67 120 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 TCRBV5S1A1TA0A578 114 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 SLC35F4A4IF30 521 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 POM121CA8CG34 1229 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 RHPN2P1A8MT19 583 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 B4DGG1 531 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 STMND1H3BQB6 276 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 TRAFD1O14545 582 aaPredicted RBP8.76□□□□□ -1.01
CAPN3-208ENST00000397204 ELFN1P0C7U0 828 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 CCL4P13236 92 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 WT1P19544 449 aaPredicted RBP8.76□□□□□ -1.01
CAPN3-208ENST00000397204 CD1CP29017 333 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 ALDH4A1P30038 563 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 ATP1A2P50993 1020 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 RENBPP51606 427 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 OR1D5P58170 312 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 TPI1P60174 286 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 RPL7AP62424 266 aaKnown RBP8.76□□□□□ -1.01
CAPN3-208ENST00000397204 SRSF1Q07955 248 aaKnown RBP eCLIP8.76□□□□□ -1.01
CAPN3-208ENST00000397204 ILF3Q12906 894 aaKnown RBP eCLIP8.76□□□□□ -1.01
CAPN3-208ENST00000397204 RALGDSQ12967 914 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 NR1D2Q14995 579 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 C16orf72Q14CZ0 275 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 ACOX1Q15067 660 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 SYCP1Q15431 976 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 AMZ1Q400G9 498 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 FKBP15Q5T1M5 1219 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 DNAJC24Q6P3W2 148 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 DCUN1D2Q6PH85 259 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 DPPA4Q7L190 304 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 MON1BQ7L1V2 547 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 VASH2Q86V25 355 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 CBARPQ8N350 705 aaPredicted RBP8.76□□□□□ -1.01
CAPN3-208ENST00000397204 PAF1Q8N7H5 531 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 ENOX1Q8TC92 643 aaKnown RBP8.76□□□□□ -1.01
CAPN3-208ENST00000397204 NKD1Q969G9 470 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 PSKH2Q96QS6 385 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 DPYSL5Q9BPU6 564 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 LGR4Q9BXB1 951 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 SLC12A9Q9BXP2 914 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 TEX101Q9BY14 249 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 GSDMCQ9BYG8 508 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 ASPSCR1Q9BZE9 553 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 SLC39A8Q9C0K1 460 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 CDH19Q9H159 772 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 VPS16Q9H269 839 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 CARS2Q9HA77 564 aaKnown RBP8.76□□□□□ -1.01
CAPN3-208ENST00000397204 RDH14Q9HBH5 336 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 PHPT1Q9NRX4 125 aaPredicted RBP8.76□□□□□ -1.01
CAPN3-208ENST00000397204 FAM207AQ9NSI2 230 aaPredicted RBP8.76□□□□□ -1.01
CAPN3-208ENST00000397204 TAB2Q9NYJ8 693 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 MOSPD1Q9UJG1 213 aa8.76□□□□□ -1.01
CAPN3-208ENST00000397204 RELNP78509 3460 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 IGHV5-10-1A0A0J9YXX1 117 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.75□□□□□ -1.01
CAPN3-208ENST00000397204 PRSS38A1L453 326 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 EEF2KO00418 725 aaKnown RBP8.75□□□□□ -1.01
CAPN3-208ENST00000397204 TEX33O43247 280 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 DAPK3O43293 454 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 ECEL1O95672 775 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 FUCA1P04066 466 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 PRKCGP05129 697 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 CEACAM5P06731 702 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 FGF3P11487 239 aaPredicted RBP8.75□□□□□ -1.01
CAPN3-208ENST00000397204 MYCLP1P12525 358 aaPredicted RBP8.75□□□□□ -1.01
CAPN3-208ENST00000397204 GM2AP17900 193 aa8.75□□□□□ -1.01
CAPN3-208ENST00000397204 NFKBIAP25963 317 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms