RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 KCNMB2Q9Y691 235 aa14.94□□□□□ -0.02
SEC13-206ENST00000397102 A8MX80 341 aa14.93□□□□□ -0.02
SEC13-206ENST00000397102 MKRN2OSH3BPM6 223 aa14.93□□□□□ -0.02
SEC13-206ENST00000397102 TRAFD1O14545 582 aaPredicted RBP14.93□□□□□ -0.02
SEC13-206ENST00000397102 VPS4BO75351 444 aa14.93□□□□□ -0.02
SEC13-206ENST00000397102 STK17BO94768 372 aa14.93□□□□□ -0.02
SEC13-206ENST00000397102 DLGAP3O95886 979 aa14.93□□□□□ -0.02
SEC13-206ENST00000397102 CYP1A1P04798 512 aaPredicted RBP14.93□□□□□ -0.02
SEC13-206ENST00000397102 IVLP07476 585 aa14.93□□□□□ -0.02
SEC13-206ENST00000397102 NR1D1P20393 614 aa14.93□□□□□ -0.02
SEC13-206ENST00000397102 ADCY8P40145 1251 aa14.93□□□□□ -0.02
SEC13-206ENST00000397102 ACTR1BP42025 376 aa14.93□□□□□ -0.02
SEC13-206ENST00000397102 UQCRFS1P47985 274 aa14.93□□□□□ -0.02
SEC13-206ENST00000397102 FASLGP48023 281 aa14.93□□□□□ -0.02
SEC13-206ENST00000397102 COPB1P53618 953 aaKnown RBP14.93□□□□□ -0.02
SEC13-206ENST00000397102 ACTR1AP61163 376 aa14.93□□□□□ -0.02
SEC13-206ENST00000397102 CDK3Q00526 305 aa14.93□□□□□ -0.02
SEC13-206ENST00000397102 MAP7Q14244 749 aa14.93□□□□□ -0.02
SEC13-206ENST00000397102 ATP1A1-AS1Q5TC04 95 aa14.93□□□□□ -0.02
SEC13-206ENST00000397102 FHL5Q5TD97 284 aa14.93□□□□□ -0.02
SEC13-206ENST00000397102 KLHDC7AQ5VTJ3 777 aa14.93□□□□□ -0.02
SEC13-206ENST00000397102 ARHGAP22Q7Z5H3 698 aa14.93□□□□□ -0.02
SEC13-206ENST00000397102 OR10G6Q8NH81 332 aa14.93□□□□□ -0.02
SEC13-206ENST00000397102 PTCD2Q8WV60 388 aaKnown RBP14.93□□□□□ -0.02
SEC13-206ENST00000397102 NDST4Q9H3R1 872 aa14.93□□□□□ -0.02
SEC13-206ENST00000397102 PRDM8Q9NQV8 689 aa14.93□□□□□ -0.02
SEC13-206ENST00000397102 DONSONQ9NYP3 566 aa14.93□□□□□ -0.02
SEC13-206ENST00000397102 B4GALT6Q9UBX8 382 aa14.93□□□□□ -0.02
SEC13-206ENST00000397102 VPS4AQ9UN37 437 aa14.93□□□□□ -0.02
SEC13-206ENST00000397102 SLC17A4Q9Y2C5 497 aa14.93□□□□□ -0.02
SEC13-206ENST00000397102 CREBBPQ92793 2442 aa14.92□□□□□ -0.02
SEC13-206ENST00000397102 A8MU76 341 aa14.92□□□□□ -0.02
SEC13-206ENST00000397102 K7EM74 188 aa14.92□□□□□ -0.02
SEC13-206ENST00000397102 PALMO75781 387 aa14.92□□□□□ -0.02
SEC13-206ENST00000397102 KRT3P12035 628 aa14.92□□□□□ -0.02
SEC13-206ENST00000397102 GPD1P21695 349 aa14.92□□□□□ -0.02
SEC13-206ENST00000397102 TEAD1P28347 426 aa14.92□□□□□ -0.02
SEC13-206ENST00000397102 RFC1P35251 1148 aaPredicted RBP14.92□□□□□ -0.02
SEC13-206ENST00000397102 STAT5AP42229 794 aa14.92□□□□□ -0.02
SEC13-206ENST00000397102 PPM1FP49593 454 aaPredicted RBP14.92□□□□□ -0.02
SEC13-206ENST00000397102 NDST2P52849 883 aa14.92□□□□□ -0.02
SEC13-206ENST00000397102 AIF1P55008 147 aa14.92□□□□□ -0.02
SEC13-206ENST00000397102 GSCP56915 257 aaPredicted RBP14.92□□□□□ -0.02
SEC13-206ENST00000397102 NSUN2Q08J23 767 aaKnown RBP eCLIP14.92□□□□□ -0.02
SEC13-206ENST00000397102 CNGA3Q16281 694 aa14.92□□□□□ -0.02
SEC13-206ENST00000397102 SNAP47Q5SQN1 464 aa14.92□□□□□ -0.02
SEC13-206ENST00000397102 CAPRIN2Q6IMN6 1127 aaKnown RBP14.92□□□□□ -0.02
SEC13-206ENST00000397102 WDR74Q6RFH5 385 aaPredicted RBP14.92□□□□□ -0.02
SEC13-206ENST00000397102 CCDC13Q8IYE1 715 aa14.92□□□□□ -0.02
SEC13-206ENST00000397102 ESX1Q8N693 406 aa14.92□□□□□ -0.02
SEC13-206ENST00000397102 GALNT11Q8NCW6 608 aa14.92□□□□□ -0.02
SEC13-206ENST00000397102 SSC4DQ8WTU2 575 aa14.92□□□□□ -0.02
SEC13-206ENST00000397102 SPOCK2Q92563 424 aa14.92□□□□□ -0.02
SEC13-206ENST00000397102 SLC38A3Q99624 504 aa14.92□□□□□ -0.02
SEC13-206ENST00000397102 CINPQ9BW66 212 aaPredicted RBP14.92□□□□□ -0.02
SEC13-206ENST00000397102 APMAPQ9HDC9 416 aa14.92□□□□□ -0.02
SEC13-206ENST00000397102 DACH1Q9UI36 760 aa14.92□□□□□ -0.02
SEC13-206ENST00000397102 NOCTQ9UK39 431 aaKnown RBP14.92□□□□□ -0.02
SEC13-206ENST00000397102 FZD10Q9ULW2 581 aa14.92□□□□□ -0.02
SEC13-206ENST00000397102 ARHGAP42A6NI28 874 aa14.91□□□□□ -0.02
SEC13-206ENST00000397102 F8VZ95 297 aa14.91□□□□□ -0.02
SEC13-206ENST00000397102 UCHL3P15374 230 aa14.91□□□□□ -0.02
SEC13-206ENST00000397102 HTR7P34969 479 aa14.91□□□□□ -0.02
SEC13-206ENST00000397102 NOP2P46087 812 aaKnown RBP14.91□□□□□ -0.02
SEC13-206ENST00000397102 POLD2P49005 469 aa14.91□□□□□ -0.02
SEC13-206ENST00000397102 AP1S1P61966 158 aa14.91□□□□□ -0.02
SEC13-206ENST00000397102 FMO1Q01740 532 aa14.91□□□□□ -0.02
SEC13-206ENST00000397102 CDR2Q01850 454 aa14.91□□□□□ -0.02
SEC13-206ENST00000397102 VWA3BQ502W6 1294 aa14.91□□□□□ -0.02
SEC13-206ENST00000397102 MIIPQ5JXC2 388 aa14.91□□□□□ -0.02
SEC13-206ENST00000397102 SCYL2Q6P3W7 929 aa14.91□□□□□ -0.02
SEC13-206ENST00000397102 WDR59Q6PJI9 974 aa14.91□□□□□ -0.02
SEC13-206ENST00000397102 ASB18Q6ZVZ8 466 aa14.91□□□□□ -0.02
SEC13-206ENST00000397102 ZNF761Q86XN6 746 aaPredicted RBP14.91□□□□□ -0.02
SEC13-206ENST00000397102 SLC30A5Q8TAD4 765 aa14.91□□□□□ -0.02
SEC13-206ENST00000397102 SLC20A1Q8WUM9 679 aa14.91□□□□□ -0.02
SEC13-206ENST00000397102 DTD2Q96FN9 168 aa14.91□□□□□ -0.02
SEC13-206ENST00000397102 SCARF2Q96GP6 870 aaPredicted RBP14.91□□□□□ -0.02
SEC13-206ENST00000397102 CELF6Q96J87 481 aaKnown RBP14.91□□□□□ -0.02
SEC13-206ENST00000397102 OR2M4Q96R27 311 aa14.91□□□□□ -0.02
SEC13-206ENST00000397102 SELENOOQ9BVL4 669 aa14.91□□□□□ -0.02
SEC13-206ENST00000397102 STK33Q9BYT3 514 aa14.91□□□□□ -0.02
SEC13-206ENST00000397102 PCDHB3Q9Y5E6 796 aa14.91□□□□□ -0.02
SEC13-206ENST00000397102 MRPS18BQ9Y676 258 aaKnown RBP14.91□□□□□ -0.02
SEC13-206ENST00000397102 RPS6KL1Q9Y6S9 549 aa14.91□□□□□ -0.02
SEC13-206ENST00000397102 CACNA1DQ01668 2161 aa14.9□□□□□ -0.02
SEC13-206ENST00000397102 A0A1W2PQ67 120 aa14.9□□□□□ -0.02
SEC13-206ENST00000397102 POLR1CO15160 346 aaPredicted RBP14.9□□□□□ -0.02
SEC13-206ENST00000397102 CCP110O43303 1012 aa14.9□□□□□ -0.02
SEC13-206ENST00000397102 HEXIM1O94992 359 aaKnown RBP14.9□□□□□ -0.02
SEC13-206ENST00000397102 PRKCSHP14314 528 aaPredicted RBP14.9□□□□□ -0.02
SEC13-206ENST00000397102 GNLYP22749 145 aa14.9□□□□□ -0.02
SEC13-206ENST00000397102 VIPR1P32241 457 aa14.9□□□□□ -0.02
SEC13-206ENST00000397102 PAPOLAP51003 745 aaKnown RBP14.9□□□□□ -0.02
SEC13-206ENST00000397102 TPI1P60174 286 aa14.9□□□□□ -0.02
SEC13-206ENST00000397102 PTP4A2Q12974 167 aa14.9□□□□□ -0.02
SEC13-206ENST00000397102 RFTN1Q14699 578 aaPredicted RBP14.9□□□□□ -0.02
SEC13-206ENST00000397102 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.9□□□□□ -0.02
SEC13-206ENST00000397102 RAET1GQ6H3X3 334 aa14.9□□□□□ -0.02
SEC13-206ENST00000397102 CBARPQ8N350 705 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms